RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 ABCA6Q8N139 1617 aa19.69■□□□□ 0.74
SLC6A8-201ENST00000253122 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.68■□□□□ 0.74
SLC6A8-201ENST00000253122 NINLQ9Y2I6 1382 aa19.68■□□□□ 0.74
SLC6A8-201ENST00000253122 EFCAB6Q5THR3 1501 aa19.68■□□□□ 0.74
SLC6A8-201ENST00000253122 SPHKAPQ2M3C7 1700 aa19.68■□□□□ 0.74
SLC6A8-201ENST00000253122 RIPK4P57078 832 aa19.67■□□□□ 0.74
SLC6A8-201ENST00000253122 USP19O94966 1318 aa19.67■□□□□ 0.74
SLC6A8-201ENST00000253122 RNF214Q8ND24 703 aa19.67■□□□□ 0.74
SLC6A8-201ENST00000253122 CCDC173Q0VFZ6 552 aa19.66■□□□□ 0.74
SLC6A8-201ENST00000253122 TMEM132EQ6IEE7 984 aa19.66■□□□□ 0.74
SLC6A8-201ENST00000253122 ISY1Q9ULR0 285 aaKnown RBP19.66■□□□□ 0.74
SLC6A8-201ENST00000253122 WDR63Q8IWG1 891 aa19.66■□□□□ 0.74
SLC6A8-201ENST00000253122 DIP2CQ9Y2E4 1556 aa19.66■□□□□ 0.74
SLC6A8-201ENST00000253122 VWDEQ8N2E2 1590 aa19.65■□□□□ 0.74
SLC6A8-201ENST00000253122 ATF7IPQ6VMQ6 1270 aa19.65■□□□□ 0.74
SLC6A8-201ENST00000253122 NPATQ14207 1427 aa19.65■□□□□ 0.74
SLC6A8-201ENST00000253122 CFAP65Q6ZU64 1925 aaKnown RBP19.64■□□□□ 0.74
SLC6A8-201ENST00000253122 TMEM57Q8N5G2 664 aa19.64■□□□□ 0.73
SLC6A8-201ENST00000253122 SSFA2P28290 1259 aa19.63■□□□□ 0.73
SLC6A8-201ENST00000253122 MPNDQ8N594 471 aa19.63■□□□□ 0.73
SLC6A8-201ENST00000253122 ANTXR1Q9H6X2 564 aa19.63■□□□□ 0.73
SLC6A8-201ENST00000253122 CEP152O94986 1710 aa19.63■□□□□ 0.73
SLC6A8-201ENST00000253122 CLTCL1P53675 1640 aa19.63■□□□□ 0.73
SLC6A8-201ENST00000253122 ZSCAN30Q86W11 494 aa19.63■□□□□ 0.73
SLC6A8-201ENST00000253122 SSH1Q8WYL5 1049 aa19.63■□□□□ 0.73
SLC6A8-201ENST00000253122 RNF17Q9BXT8 1623 aaKnown RBP19.62■□□□□ 0.73
SLC6A8-201ENST00000253122 FRMPD1Q5SYB0 1578 aa19.62■□□□□ 0.73
SLC6A8-201ENST00000253122 MROH1Q8NDA8 1641 aa19.62■□□□□ 0.73
SLC6A8-201ENST00000253122 K7ELQ4 463 aaPredicted RBP19.62■□□□□ 0.73
SLC6A8-201ENST00000253122 LMTK2Q8IWU2 1503 aa19.62■□□□□ 0.73
SLC6A8-201ENST00000253122 COL17A1Q9UMD9 1497 aaPredicted RBP19.62■□□□□ 0.73
SLC6A8-201ENST00000253122 PRPF40AO75400 957 aaKnown RBP19.62■□□□□ 0.73
SLC6A8-201ENST00000253122 GGNBP2Q9H3C7 697 aa19.62■□□□□ 0.73
SLC6A8-201ENST00000253122 ABCC3O15438 1527 aa19.61■□□□□ 0.73
SLC6A8-201ENST00000253122 SLC52A1Q9NWF4 448 aa19.61■□□□□ 0.73
SLC6A8-201ENST00000253122 RICTORQ6R327 1708 aa19.61■□□□□ 0.73
SLC6A8-201ENST00000253122 UGGT1Q9NYU2 1555 aa19.61■□□□□ 0.73
SLC6A8-201ENST00000253122 TRIM27P14373 513 aa19.61■□□□□ 0.73
SLC6A8-201ENST00000253122 ST18O60284 1047 aa19.6■□□□□ 0.73
SLC6A8-201ENST00000253122 CHD1LQ86WJ1 897 aa19.6■□□□□ 0.73
SLC6A8-201ENST00000253122 VGFO15240 615 aaPredicted RBP19.6■□□□□ 0.73
SLC6A8-201ENST00000253122 GPRASP1Q5JY77 1395 aa19.6■□□□□ 0.73
SLC6A8-201ENST00000253122 PPRC1Q5VV67 1664 aaKnown RBP19.6■□□□□ 0.73
SLC6A8-201ENST00000253122 ZNF521Q96K83 1311 aa19.6■□□□□ 0.73
SLC6A8-201ENST00000253122 KIAA2012Q0VF49 1180 aa19.6■□□□□ 0.73
SLC6A8-201ENST00000253122 CIZ1Q9ULV3 898 aaPredicted RBP19.59■□□□□ 0.73
SLC6A8-201ENST00000253122 ADGRF5Q8IZF2 1346 aa19.59■□□□□ 0.73
SLC6A8-201ENST00000253122 RPGRIP1LQ68CZ1 1315 aa19.58■□□□□ 0.73
SLC6A8-201ENST00000253122 RBM42Q9BTD8 480 aaKnown RBP19.58■□□□□ 0.73
SLC6A8-201ENST00000253122 KIF16BQ96L93 1317 aa19.58■□□□□ 0.72
SLC6A8-201ENST00000253122 NUCB2P80303 420 aa19.58■□□□□ 0.72
SLC6A8-201ENST00000253122 XPCQ01831 940 aaPredicted RBP19.58■□□□□ 0.72
SLC6A8-201ENST00000253122 PPP6R1Q9UPN7 881 aa19.58■□□□□ 0.72
SLC6A8-201ENST00000253122 NOS1P29475 1434 aa19.57■□□□□ 0.72
SLC6A8-201ENST00000253122 CARD14Q9BXL6 1004 aa19.57■□□□□ 0.72
SLC6A8-201ENST00000253122 PDCL3Q9H2J4 239 aa19.57■□□□□ 0.72
SLC6A8-201ENST00000253122 TRPM1Q7Z4N2 1603 aa19.57■□□□□ 0.72
SLC6A8-201ENST00000253122 KIF1BO60333 1816 aa19.56■□□□□ 0.72
SLC6A8-201ENST00000253122 A0A0U1RQG5 324 aaPredicted RBP19.56■□□□□ 0.72
SLC6A8-201ENST00000253122 IDI1Q13907 227 aa19.56■□□□□ 0.72
SLC6A8-201ENST00000253122 FSD2A1L4K1 749 aa19.55■□□□□ 0.72
SLC6A8-201ENST00000253122 CABP2Q9NPB3 220 aa19.55■□□□□ 0.72
SLC6A8-201ENST00000253122 PLPPR3Q6T4P5 718 aa19.55■□□□□ 0.72
SLC6A8-201ENST00000253122 UQCRHLA0A096LP55 91 aa19.54■□□□□ 0.72
SLC6A8-201ENST00000253122 CDC45O75419 566 aa19.54■□□□□ 0.72
SLC6A8-201ENST00000253122 PLEKHG5O94827 1062 aa19.54■□□□□ 0.72
SLC6A8-201ENST00000253122 UQCRHP07919 91 aa19.54■□□□□ 0.72
SLC6A8-201ENST00000253122 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.54■□□□□ 0.72
SLC6A8-201ENST00000253122 TRMT2AQ8IZ69 625 aaKnown RBP19.54■□□□□ 0.72
SLC6A8-201ENST00000253122 FBXO31Q5XUX0 539 aaPredicted RBP19.54■□□□□ 0.72
SLC6A8-201ENST00000253122 GAS2L3Q86XJ1 694 aa19.54■□□□□ 0.72
SLC6A8-201ENST00000253122 NSD3Q9BZ95 1437 aa19.53■□□□□ 0.72
SLC6A8-201ENST00000253122 SCAF11Q99590 1463 aaKnown RBP19.53■□□□□ 0.72
SLC6A8-201ENST00000253122 BCL11BQ9C0K0 894 aaPredicted RBP19.53■□□□□ 0.72
SLC6A8-201ENST00000253122 INSRP06213 1382 aa19.52■□□□□ 0.72
SLC6A8-201ENST00000253122 ASXL1Q8IXJ9 1541 aa19.52■□□□□ 0.72
SLC6A8-201ENST00000253122 HMOX1P09601 288 aa19.51■□□□□ 0.71
SLC6A8-201ENST00000253122 CFAP44Q96MT7 982 aa19.51■□□□□ 0.71
SLC6A8-201ENST00000253122 DIAPH1O60610 1272 aaKnown RBP19.51■□□□□ 0.71
SLC6A8-201ENST00000253122 SYAP1Q96A49 352 aaPredicted RBP19.51■□□□□ 0.71
SLC6A8-201ENST00000253122 CAMSAP1Q5T5Y3 1602 aa19.5■□□□□ 0.71
SLC6A8-201ENST00000253122 TMPOP42166 694 aaKnown RBP19.5■□□□□ 0.71
SLC6A8-201ENST00000253122 BAG4O95429 457 aaKnown RBP19.5■□□□□ 0.71
SLC6A8-201ENST00000253122 CSPP1Q1MSJ5 1256 aa19.5■□□□□ 0.71
SLC6A8-201ENST00000253122 CHAF1AQ13111 956 aaPredicted RBP19.49■□□□□ 0.71
SLC6A8-201ENST00000253122 ARHGAP31Q2M1Z3 1444 aa19.49■□□□□ 0.71
SLC6A8-201ENST00000253122 EVC2Q86UK5 1308 aa19.49■□□□□ 0.71
SLC6A8-201ENST00000253122 PIK3C2GO75747 1445 aa19.49■□□□□ 0.71
SLC6A8-201ENST00000253122 SLC4A10Q6U841 1118 aa19.49■□□□□ 0.71
SLC6A8-201ENST00000253122 PRDM10Q9NQV6 1147 aa19.49■□□□□ 0.71
SLC6A8-201ENST00000253122 MCCP23508 829 aa19.49■□□□□ 0.71
SLC6A8-201ENST00000253122 TRIM6-TRIM34B2RNG4 842 aa19.48■□□□□ 0.71
SLC6A8-201ENST00000253122 TBC1D9Q6ZT07 1266 aa19.48■□□□□ 0.71
SLC6A8-201ENST00000253122 HDGFL2Q7Z4V5 671 aaPredicted RBP19.48■□□□□ 0.71
SLC6A8-201ENST00000253122 MYOM2P54296 1465 aa19.48■□□□□ 0.71
SLC6A8-201ENST00000253122 MAP7D2Q96T17 732 aa19.48■□□□□ 0.71
SLC6A8-201ENST00000253122 MADDQ8WXG6 1647 aa19.48■□□□□ 0.71
SLC6A8-201ENST00000253122 GAS2L2Q8NHY3 880 aa19.47■□□□□ 0.71
SLC6A8-201ENST00000253122 TERF2IPQ9NYB0 399 aa19.47■□□□□ 0.71
SLC6A8-201ENST00000253122 SOX12O15370 315 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms