RNA–Protein interactions for RNA: ENST00000248566.3

SEM1-201, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEM1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-201ENST00000248566 PAK3O75914 559 aaPredicted RBP18.07■□□□□ 0.48
SEM1-201ENST00000248566 USP21Q9UK80 565 aa18.07■□□□□ 0.48
SEM1-201ENST00000248566 SRPK2P78362 688 aaKnown RBP18.06■□□□□ 0.48
SEM1-201ENST00000248566 CABLES1Q8TDN4 633 aa18.06■□□□□ 0.48
SEM1-201ENST00000248566 TRPM1Q7Z4N2 1603 aa18.06■□□□□ 0.48
SEM1-201ENST00000248566 SBNO1A3KN83 1393 aa18.04■□□□□ 0.48
SEM1-201ENST00000248566 ITSN1Q15811 1721 aa18.04■□□□□ 0.48
SEM1-201ENST00000248566 NBPF8Q3BBV2 869 aa18.03■□□□□ 0.48
SEM1-201ENST00000248566 QRICH2Q9H0J4 1663 aa18.03■□□□□ 0.48
SEM1-201ENST00000248566 ATP7BP35670 1465 aa18.02■□□□□ 0.48
SEM1-201ENST00000248566 ARHGEF10O15013 1369 aa18.02■□□□□ 0.48
SEM1-201ENST00000248566 MARF1Q9Y4F3 1742 aaKnown RBP18.02■□□□□ 0.48
SEM1-201ENST00000248566 RBM6P78332 1123 aaKnown RBP18.01■□□□□ 0.47
SEM1-201ENST00000248566 CHRDL2Q6WN34 429 aa18.01■□□□□ 0.47
SEM1-201ENST00000248566 CABP2Q9NPB3 220 aa18.01■□□□□ 0.47
SEM1-201ENST00000248566 PCGF6Q9BYE7 350 aa18■□□□□ 0.47
SEM1-201ENST00000248566 TRPC5Q9UL62 973 aaPredicted RBP18■□□□□ 0.47
SEM1-201ENST00000248566 CCDC61Q9Y6R9 512 aa18■□□□□ 0.47
SEM1-201ENST00000248566 FNBP4Q8N3X1 1017 aaPredicted RBP17.99■□□□□ 0.47
SEM1-201ENST00000248566 TRPM3Q9HCF6 1732 aaPredicted RBP17.99■□□□□ 0.47
SEM1-201ENST00000248566 CARD11Q9BXL7 1154 aa17.98■□□□□ 0.47
SEM1-201ENST00000248566 ACEP12821 1306 aa17.98■□□□□ 0.47
SEM1-201ENST00000248566 NUTM2GQ5VZR2 741 aa17.97■□□□□ 0.47
SEM1-201ENST00000248566 EVC2Q86UK5 1308 aa17.96■□□□□ 0.47
SEM1-201ENST00000248566 PPIP5K1Q6PFW1 1433 aa17.96■□□□□ 0.47
SEM1-201ENST00000248566 TOPAZ1Q8N9V7 1692 aa17.95■□□□□ 0.46
SEM1-201ENST00000248566 CCDC9Q9Y3X0 531 aaKnown RBP17.95■□□□□ 0.46
SEM1-201ENST00000248566 ALS2Q96Q42 1657 aa17.95■□□□□ 0.46
SEM1-201ENST00000248566 ABCA3Q99758 1704 aa17.94■□□□□ 0.46
SEM1-201ENST00000248566 BCL9LQ86UU0 1499 aa17.94■□□□□ 0.46
SEM1-201ENST00000248566 PLEKHG3A1L390 1219 aa17.94■□□□□ 0.46
SEM1-201ENST00000248566 UNC5CLQ8IV45 518 aa17.94■□□□□ 0.46
SEM1-201ENST00000248566 ATF5Q9Y2D1 282 aaPredicted RBP17.94■□□□□ 0.46
SEM1-201ENST00000248566 RGS12O14924 1447 aa17.93■□□□□ 0.46
SEM1-201ENST00000248566 ATRNO75882 1429 aa17.93■□□□□ 0.46
SEM1-201ENST00000248566 CDK12Q9NYV4 1490 aaPredicted RBP17.93■□□□□ 0.46
SEM1-201ENST00000248566 CABP1Q9NZU7 370 aa17.93■□□□□ 0.46
SEM1-201ENST00000248566 POLR3AO14802 1390 aaPredicted RBP17.92■□□□□ 0.46
SEM1-201ENST00000248566 FAM83GA6ND36 823 aa17.91■□□□□ 0.46
SEM1-201ENST00000248566 ABTB2Q8N961 1025 aa17.91■□□□□ 0.46
SEM1-201ENST00000248566 GJD4Q96KN9 370 aaPredicted RBP17.91■□□□□ 0.46
SEM1-201ENST00000248566 FOXD4L1Q9NU39 408 aa17.91■□□□□ 0.46
SEM1-201ENST00000248566 SLIT2O94813 1529 aa17.9■□□□□ 0.46
SEM1-201ENST00000248566 RALGAPBQ86X10 1494 aa17.9■□□□□ 0.46
SEM1-201ENST00000248566 PLCH1Q4KWH8 1693 aa17.89■□□□□ 0.46
SEM1-201ENST00000248566 PRDM11Q9NQV5 511 aa17.88■□□□□ 0.45
SEM1-201ENST00000248566 BTG4Q9NY30 223 aa17.88■□□□□ 0.45
SEM1-201ENST00000248566 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.87■□□□□ 0.45
SEM1-201ENST00000248566 ZC3H6P61129 1189 aaKnown RBP17.87■□□□□ 0.45
SEM1-201ENST00000248566 UPF1Q92900 1129 aaKnown RBP eCLIP17.87■□□□□ 0.45
SEM1-201ENST00000248566 NWD2Q9ULI1 1742 aa17.85■□□□□ 0.45
SEM1-201ENST00000248566 A0A0G2JS52 829 aa17.85■□□□□ 0.45
SEM1-201ENST00000248566 MYT1Q01538 1121 aa17.85■□□□□ 0.45
SEM1-201ENST00000248566 CHRNA2Q15822 529 aa17.85■□□□□ 0.45
SEM1-201ENST00000248566 ZBTB7CA1YPR0 619 aa17.84■□□□□ 0.45
SEM1-201ENST00000248566 VPS72Q15906 364 aa17.84■□□□□ 0.45
SEM1-201ENST00000248566 NLRP13Q86W25 1043 aa17.84■□□□□ 0.45
SEM1-201ENST00000248566 TMC1Q8TDI8 760 aa17.84■□□□□ 0.45
SEM1-201ENST00000248566 COL14A1Q05707 1796 aaKnown RBP17.84■□□□□ 0.45
SEM1-201ENST00000248566 CRYBG1Q9Y4K1 1723 aa17.84■□□□□ 0.45
SEM1-201ENST00000248566 KIAA0232Q92628 1395 aa17.84■□□□□ 0.45
SEM1-201ENST00000248566 PHRF1Q9P1Y6 1649 aaKnown RBP17.83■□□□□ 0.45
SEM1-201ENST00000248566 CCER1Q8TC90 406 aaPredicted RBP17.83■□□□□ 0.44
SEM1-201ENST00000248566 ATAD2Q6PL18 1390 aa17.83■□□□□ 0.44
SEM1-201ENST00000248566 GLI3P10071 1580 aa17.82■□□□□ 0.44
SEM1-201ENST00000248566 USP6P35125 1406 aa17.82■□□□□ 0.44
SEM1-201ENST00000248566 NLRP6P59044 892 aa17.82■□□□□ 0.44
SEM1-201ENST00000248566 STRN4Q9NRL3 753 aa17.82■□□□□ 0.44
SEM1-201ENST00000248566 ST20-MTHFSA0A0A6YYL1 179 aa17.8■□□□□ 0.44
SEM1-201ENST00000248566 ZNF692Q9BU19 519 aaPredicted RBP17.8■□□□□ 0.44
SEM1-201ENST00000248566 SBNO2Q9Y2G9 1366 aa17.8■□□□□ 0.44
SEM1-201ENST00000248566 EVA1CP58658 441 aa17.79■□□□□ 0.44
SEM1-201ENST00000248566 SEPT12Q8IYM1 358 aa17.79■□□□□ 0.44
SEM1-201ENST00000248566 AKT1S1Q96B36 256 aa17.79■□□□□ 0.44
SEM1-201ENST00000248566 NRAPQ86VF7 1730 aa17.79■□□□□ 0.44
SEM1-201ENST00000248566 BRD4O60885 1362 aaPredicted RBP17.78■□□□□ 0.44
SEM1-201ENST00000248566 KTN1Q86UP2 1357 aaKnown RBP17.78■□□□□ 0.44
SEM1-201ENST00000248566 GCP02774 474 aa17.78■□□□□ 0.44
SEM1-201ENST00000248566 FAM98CQ17RN3 349 aaKnown RBP17.78■□□□□ 0.44
SEM1-201ENST00000248566 ZBTB12Q9Y330 459 aaPredicted RBP17.78■□□□□ 0.44
SEM1-201ENST00000248566 CLSPNQ9HAW4 1339 aa17.78■□□□□ 0.44
SEM1-201ENST00000248566 SOX12O15370 315 aa17.77■□□□□ 0.44
SEM1-201ENST00000248566 TTC21BQ7Z4L5 1316 aa17.77■□□□□ 0.44
SEM1-201ENST00000248566 NRKQ7Z2Y5 1582 aa17.77■□□□□ 0.43
SEM1-201ENST00000248566 AKAP12Q02952 1782 aa17.76■□□□□ 0.43
SEM1-201ENST00000248566 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.76■□□□□ 0.43
SEM1-201ENST00000248566 USP35Q9P2H5 1018 aa17.76■□□□□ 0.43
SEM1-201ENST00000248566 USP19O94966 1318 aa17.76■□□□□ 0.43
SEM1-201ENST00000248566 HDGFL2Q7Z4V5 671 aaPredicted RBP17.75■□□□□ 0.43
SEM1-201ENST00000248566 SLC12A5Q9H2X9 1139 aa17.75■□□□□ 0.43
SEM1-201ENST00000248566 PIK3C2AO00443 1686 aa17.74■□□□□ 0.43
SEM1-201ENST00000248566 USP47Q96K76 1375 aa17.74■□□□□ 0.43
SEM1-201ENST00000248566 TIMELESSQ9UNS1 1208 aa17.73■□□□□ 0.43
SEM1-201ENST00000248566 BRWD3Q6RI45 1802 aa17.73■□□□□ 0.43
SEM1-201ENST00000248566 SPATA31A5Q5VU36 1347 aa17.73■□□□□ 0.43
SEM1-201ENST00000248566 SPATA31A7Q8IWB4 1347 aa17.73■□□□□ 0.43
SEM1-201ENST00000248566 TTC21AQ8NDW8 1320 aa17.73■□□□□ 0.43
SEM1-201ENST00000248566 CPSF1Q10570 1443 aaKnown RBP17.73■□□□□ 0.43
SEM1-201ENST00000248566 SSH2Q76I76 1423 aa17.73■□□□□ 0.43
SEM1-201ENST00000248566 KRT27Q7Z3Y8 459 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms