RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 SMARCA5O60264 1052 aaPredicted RBP20.99■□□□□ 0.95
SGPP1-201ENST00000247225 UNC13BO14795 1591 aa20.99■□□□□ 0.95
SGPP1-201ENST00000247225 HDAC1Q13547 482 aaPredicted RBP20.99■□□□□ 0.95
SGPP1-201ENST00000247225 SMC5Q8IY18 1101 aa20.99■□□□□ 0.95
SGPP1-201ENST00000247225 ZRANB1Q9UGI0 708 aa20.99■□□□□ 0.95
SGPP1-201ENST00000247225 GOLGA6L22H0YM25 854 aa20.98■□□□□ 0.95
SGPP1-201ENST00000247225 TERF2IPQ9NYB0 399 aa20.98■□□□□ 0.95
SGPP1-201ENST00000247225 NLRP1Q9C000 1473 aa20.98■□□□□ 0.95
SGPP1-201ENST00000247225 ERBB4Q15303 1308 aa20.98■□□□□ 0.95
SGPP1-201ENST00000247225 CLTCL1P53675 1640 aa20.98■□□□□ 0.95
SGPP1-201ENST00000247225 NUCB1Q02818 461 aa20.98■□□□□ 0.95
SGPP1-201ENST00000247225 VGFO15240 615 aaPredicted RBP20.98■□□□□ 0.95
SGPP1-201ENST00000247225 KRT24Q2M2I5 525 aa20.97■□□□□ 0.95
SGPP1-201ENST00000247225 FSD2A1L4K1 749 aa20.97■□□□□ 0.95
SGPP1-201ENST00000247225 MLECQ14165 292 aa20.97■□□□□ 0.95
SGPP1-201ENST00000247225 CAVIN1Q6NZI2 390 aaKnown RBP20.97■□□□□ 0.95
SGPP1-201ENST00000247225 PLPPR3Q6T4P5 718 aa20.97■□□□□ 0.95
SGPP1-201ENST00000247225 HDGFL2Q7Z4V5 671 aaPredicted RBP20.97■□□□□ 0.95
SGPP1-201ENST00000247225 WAPLQ7Z5K2 1190 aa20.97■□□□□ 0.95
SGPP1-201ENST00000247225 PHF23Q9BUL5 403 aaPredicted RBP20.97■□□□□ 0.95
SGPP1-201ENST00000247225 EMILIN1Q9Y6C2 1016 aa20.96■□□□□ 0.95
SGPP1-201ENST00000247225 AAMPQ13685 434 aa20.96■□□□□ 0.95
SGPP1-201ENST00000247225 IDI1Q13907 227 aa20.96■□□□□ 0.95
SGPP1-201ENST00000247225 RRS1Q15050 365 aaKnown RBP20.96■□□□□ 0.95
SGPP1-201ENST00000247225 CCDC27Q2M243 656 aa20.96■□□□□ 0.95
SGPP1-201ENST00000247225 KIF16BQ96L93 1317 aa20.95■□□□□ 0.95
SGPP1-201ENST00000247225 SLC4A10Q6U841 1118 aa20.95■□□□□ 0.94
SGPP1-201ENST00000247225 OTUD7AQ8TE49 926 aaPredicted RBP20.95■□□□□ 0.94
SGPP1-201ENST00000247225 RBM10P98175 930 aaKnown RBP20.94■□□□□ 0.94
SGPP1-201ENST00000247225 K7ELQ4 463 aaPredicted RBP20.93■□□□□ 0.94
SGPP1-201ENST00000247225 PLEKHF1Q96S99 279 aa20.93■□□□□ 0.94
SGPP1-201ENST00000247225 CDK19Q9BWU1 502 aa20.93■□□□□ 0.94
SGPP1-201ENST00000247225 PLEKHG5O94827 1062 aa20.93■□□□□ 0.94
SGPP1-201ENST00000247225 FANCAO15360 1455 aa20.93■□□□□ 0.94
SGPP1-201ENST00000247225 KDM5AP29375 1690 aaKnown RBP20.93■□□□□ 0.94
SGPP1-201ENST00000247225 NASPP49321 788 aaPredicted RBP20.93■□□□□ 0.94
SGPP1-201ENST00000247225 PKP1Q13835 747 aa20.93■□□□□ 0.94
SGPP1-201ENST00000247225 TSHZ3Q63HK5 1081 aa20.92■□□□□ 0.94
SGPP1-201ENST00000247225 MIS18AQ9NYP9 233 aa20.92■□□□□ 0.94
SGPP1-201ENST00000247225 A0A1W2PP64 1363 aa20.92■□□□□ 0.94
SGPP1-201ENST00000247225 RNF214Q8ND24 703 aa20.92■□□□□ 0.94
SGPP1-201ENST00000247225 NECTIN2Q92692 538 aa20.92■□□□□ 0.94
SGPP1-201ENST00000247225 CLCN1P35523 988 aa20.91■□□□□ 0.94
SGPP1-201ENST00000247225 TWISTNBQ3B726 338 aaPredicted RBP20.91■□□□□ 0.94
SGPP1-201ENST00000247225 NCKAP5LQ9HCH0 1330 aa20.91■□□□□ 0.94
SGPP1-201ENST00000247225 C8orf58Q8NAV2 365 aa20.91■□□□□ 0.94
SGPP1-201ENST00000247225 RBM27Q9P2N5 1060 aaKnown RBP20.91■□□□□ 0.94
SGPP1-201ENST00000247225 ADGRL1O94910 1474 aa20.91■□□□□ 0.94
SGPP1-201ENST00000247225 PRPF40AO75400 957 aaKnown RBP20.9■□□□□ 0.94
SGPP1-201ENST00000247225 ZNF692Q9BU19 519 aaPredicted RBP20.9■□□□□ 0.94
SGPP1-201ENST00000247225 CALD1Q05682 793 aaKnown RBP20.89■□□□□ 0.94
SGPP1-201ENST00000247225 FBXO31Q5XUX0 539 aaPredicted RBP20.89■□□□□ 0.94
SGPP1-201ENST00000247225 GLIPR1L2Q4G1C9 344 aa20.89■□□□□ 0.93
SGPP1-201ENST00000247225 ZBTB7BO15156 539 aaPredicted RBP20.89■□□□□ 0.93
SGPP1-201ENST00000247225 DTNBO60941 627 aa20.89■□□□□ 0.93
SGPP1-201ENST00000247225 TRPM2O94759 1503 aa20.89■□□□□ 0.93
SGPP1-201ENST00000247225 CD109Q6YHK3 1445 aa20.88■□□□□ 0.93
SGPP1-201ENST00000247225 ZNF518AQ6AHZ1 1483 aa20.88■□□□□ 0.93
SGPP1-201ENST00000247225 MSNP26038 577 aaKnown RBP20.88■□□□□ 0.93
SGPP1-201ENST00000247225 SIRT2Q8IXJ6 389 aa20.88■□□□□ 0.93
SGPP1-201ENST00000247225 MBIPQ9NS73 344 aa20.88■□□□□ 0.93
SGPP1-201ENST00000247225 VAMP4O75379 141 aa20.87■□□□□ 0.93
SGPP1-201ENST00000247225 NME9Q86XW9 330 aa20.87■□□□□ 0.93
SGPP1-201ENST00000247225 LAMC1P11047 1609 aa20.87■□□□□ 0.93
SGPP1-201ENST00000247225 ZGPATQ8N5A5 531 aaKnown RBP20.86■□□□□ 0.93
SGPP1-201ENST00000247225 BMP2KLQ5H9B9 411 aa20.86■□□□□ 0.93
SGPP1-201ENST00000247225 CLASP1Q7Z460 1538 aa20.86■□□□□ 0.93
SGPP1-201ENST00000247225 RAB3GAP1Q15042 981 aa20.86■□□□□ 0.93
SGPP1-201ENST00000247225 ANKRD36BQ8N2N9 1353 aa20.85■□□□□ 0.93
SGPP1-201ENST00000247225 CDC45O75419 566 aa20.85■□□□□ 0.93
SGPP1-201ENST00000247225 RBM25P49756 843 aaKnown RBP20.85■□□□□ 0.93
SGPP1-201ENST00000247225 KIF2CQ99661 725 aa20.85■□□□□ 0.93
SGPP1-201ENST00000247225 IQGAP1P46940 1657 aa20.85■□□□□ 0.93
SGPP1-201ENST00000247225 BAG4O95429 457 aaKnown RBP20.85■□□□□ 0.93
SGPP1-201ENST00000247225 KIAA1211Q6ZU35 1233 aa20.84■□□□□ 0.93
SGPP1-201ENST00000247225 POLKQ9UBT6 870 aa20.83■□□□□ 0.93
SGPP1-201ENST00000247225 R3HCC1Q9Y3T6 440 aaKnown RBP20.83■□□□□ 0.93
SGPP1-201ENST00000247225 CT47B1P0C2W7 299 aaPredicted RBP20.83■□□□□ 0.93
SGPP1-201ENST00000247225 MCM10Q7L590 875 aa20.83■□□□□ 0.93
SGPP1-201ENST00000247225 MRPL50Q8N5N7 158 aaKnown RBP20.83■□□□□ 0.93
SGPP1-201ENST00000247225 FAM13BQ9NYF5 915 aa20.83■□□□□ 0.93
SGPP1-201ENST00000247225 RNF17Q9BXT8 1623 aaKnown RBP20.83■□□□□ 0.92
SGPP1-201ENST00000247225 PLCB2Q00722 1185 aa20.83■□□□□ 0.92
SGPP1-201ENST00000247225 PLXNC1O60486 1568 aa20.82■□□□□ 0.92
SGPP1-201ENST00000247225 GSPT1P15170 499 aaKnown RBP20.82■□□□□ 0.92
SGPP1-201ENST00000247225 MYOM1P52179 1685 aa20.82■□□□□ 0.92
SGPP1-201ENST00000247225 GCC1Q96CN9 775 aa20.82■□□□□ 0.92
SGPP1-201ENST00000247225 ABCC1P33527 1531 aa20.81■□□□□ 0.92
SGPP1-201ENST00000247225 FCHSD2O94868 740 aa20.81■□□□□ 0.92
SGPP1-201ENST00000247225 NFE2L2Q16236 605 aa20.81■□□□□ 0.92
SGPP1-201ENST00000247225 SKOR2Q2VWA4 1001 aaPredicted RBP20.81■□□□□ 0.92
SGPP1-201ENST00000247225 F6X3S4 739 aa20.8■□□□□ 0.92
SGPP1-201ENST00000247225 XPCQ01831 940 aaPredicted RBP20.8■□□□□ 0.92
SGPP1-201ENST00000247225 SNX21Q969T3 373 aa20.8■□□□□ 0.92
SGPP1-201ENST00000247225 ABCA6Q8N139 1617 aa20.8■□□□□ 0.92
SGPP1-201ENST00000247225 PTMAP06454 111 aaKnown RBP20.8■□□□□ 0.92
SGPP1-201ENST00000247225 GNAI1P63096 354 aa20.8■□□□□ 0.92
SGPP1-201ENST00000247225 PPIP5K1Q6PFW1 1433 aa20.79■□□□□ 0.92
SGPP1-201ENST00000247225 AEBP1Q8IUX7 1158 aa20.79■□□□□ 0.92
SGPP1-201ENST00000247225 RILPL2Q969X0 211 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms