RNA–Protein interactions for RNA: ENST00000239367.6

LRP11-201, Transcript of LDL receptor related protein 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP11, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP11-201ENST00000239367 ITPRIPQ8IWB1 547 aa20.58■□□□□ 0.88
LRP11-201ENST00000239367 ZKSCAN2Q63HK3 967 aa20.57■□□□□ 0.88
LRP11-201ENST00000239367 ADGRB2O60241 1585 aa20.57■□□□□ 0.88
LRP11-201ENST00000239367 A0A0U1RQG5 324 aaPredicted RBP20.56■□□□□ 0.88
LRP11-201ENST00000239367 ANKRD36BQ8N2N9 1353 aa20.56■□□□□ 0.88
LRP11-201ENST00000239367 R3HCC1Q9Y3T6 440 aaKnown RBP20.56■□□□□ 0.88
LRP11-201ENST00000239367 MSNP26038 577 aaKnown RBP20.55■□□□□ 0.88
LRP11-201ENST00000239367 DZIP1LQ8IYY4 767 aaKnown RBP20.54■□□□□ 0.88
LRP11-201ENST00000239367 LNPKQ9C0E8 428 aa20.54■□□□□ 0.88
LRP11-201ENST00000239367 CHGAP10645 457 aaKnown RBP20.54■□□□□ 0.88
LRP11-201ENST00000239367 EVC2Q86UK5 1308 aa20.54■□□□□ 0.88
LRP11-201ENST00000239367 TNPO1Q92973 898 aaKnown RBP20.54■□□□□ 0.88
LRP11-201ENST00000239367 DDX11L8A8MPP1 907 aa20.53■□□□□ 0.88
LRP11-201ENST00000239367 NPATQ14207 1427 aa20.53■□□□□ 0.88
LRP11-201ENST00000239367 U2AF1L5P0DN76 240 aaPredicted RBP20.52■□□□□ 0.88
LRP11-201ENST00000239367 U2AF1Q01081 240 aaKnown RBP eCLIP20.52■□□□□ 0.88
LRP11-201ENST00000239367 TSR2Q969E8 191 aaKnown RBP20.52■□□□□ 0.88
LRP11-201ENST00000239367 HDAC1Q13547 482 aaPredicted RBP20.51■□□□□ 0.87
LRP11-201ENST00000239367 DDX49Q9Y6V7 483 aaKnown RBP20.51■□□□□ 0.87
LRP11-201ENST00000239367 FOXD4L5Q5VV16 416 aaPredicted RBP20.51■□□□□ 0.87
LRP11-201ENST00000239367 MPNDQ8N594 471 aa20.51■□□□□ 0.87
LRP11-201ENST00000239367 FOXD4L4Q8WXT5 416 aaPredicted RBP20.51■□□□□ 0.87
LRP11-201ENST00000239367 TMEM132EQ6IEE7 984 aa20.5■□□□□ 0.87
LRP11-201ENST00000239367 SMC4Q9NTJ3 1288 aa20.5■□□□□ 0.87
LRP11-201ENST00000239367 GBP4Q96PP9 640 aa20.49■□□□□ 0.87
LRP11-201ENST00000239367 RBM42Q9BTD8 480 aaKnown RBP20.49■□□□□ 0.87
LRP11-201ENST00000239367 GLI2P10070 1586 aa20.49■□□□□ 0.87
LRP11-201ENST00000239367 NASPP49321 788 aaPredicted RBP20.49■□□□□ 0.87
LRP11-201ENST00000239367 TULP4Q9NRJ4 1543 aa20.48■□□□□ 0.87
LRP11-201ENST00000239367 PRDM10Q9NQV6 1147 aa20.48■□□□□ 0.87
LRP11-201ENST00000239367 DDX19BQ9UMR2 479 aa20.48■□□□□ 0.87
LRP11-201ENST00000239367 PLEKHF1Q96S99 279 aa20.47■□□□□ 0.87
LRP11-201ENST00000239367 IL16Q14005 1332 aa20.47■□□□□ 0.87
LRP11-201ENST00000239367 U2SURPO15042 1029 aaKnown RBP20.46■□□□□ 0.87
LRP11-201ENST00000239367 ARHGEF28Q8N1W1 1705 aaKnown RBP20.45■□□□□ 0.86
LRP11-201ENST00000239367 PLEKHG5O94827 1062 aa20.45■□□□□ 0.86
LRP11-201ENST00000239367 TRIM27P14373 513 aa20.45■□□□□ 0.86
LRP11-201ENST00000239367 ASXL2Q76L83 1435 aa20.45■□□□□ 0.86
LRP11-201ENST00000239367 ABCC11Q96J66 1382 aa20.45■□□□□ 0.86
LRP11-201ENST00000239367 PODXL2Q9NZ53 605 aa20.45■□□□□ 0.86
LRP11-201ENST00000239367 VGFO15240 615 aaPredicted RBP20.45■□□□□ 0.86
LRP11-201ENST00000239367 SSFA2P28290 1259 aa20.45■□□□□ 0.86
LRP11-201ENST00000239367 XPCQ01831 940 aaPredicted RBP20.45■□□□□ 0.86
LRP11-201ENST00000239367 ATF7IPQ6VMQ6 1270 aa20.44■□□□□ 0.86
LRP11-201ENST00000239367 EXOSC9Q06265 439 aaKnown RBP20.44■□□□□ 0.86
LRP11-201ENST00000239367 HECW2Q9P2P5 1572 aa20.44■□□□□ 0.86
LRP11-201ENST00000239367 TMPOP42166 694 aaKnown RBP20.44■□□□□ 0.86
LRP11-201ENST00000239367 GOLGA6L22H0YM25 854 aa20.43■□□□□ 0.86
LRP11-201ENST00000239367 SMC5Q8IY18 1101 aa20.43■□□□□ 0.86
LRP11-201ENST00000239367 MLH3Q9UHC1 1453 aa20.43■□□□□ 0.86
LRP11-201ENST00000239367 CD109Q6YHK3 1445 aa20.43■□□□□ 0.86
LRP11-201ENST00000239367 FRMPD1Q5SYB0 1578 aa20.43■□□□□ 0.86
LRP11-201ENST00000239367 TRIM35Q9UPQ4 493 aa20.42■□□□□ 0.86
LRP11-201ENST00000239367 MCTP1Q6DN14 999 aa20.42■□□□□ 0.86
LRP11-201ENST00000239367 SSH1Q8WYL5 1049 aa20.42■□□□□ 0.86
LRP11-201ENST00000239367 CAVIN1Q6NZI2 390 aaKnown RBP20.41■□□□□ 0.86
LRP11-201ENST00000239367 COL3A1P02461 1466 aaPredicted RBP20.41■□□□□ 0.86
LRP11-201ENST00000239367 ABCC3O15438 1527 aa20.41■□□□□ 0.86
LRP11-201ENST00000239367 FOXD4L6Q3SYB3 417 aaPredicted RBP20.41■□□□□ 0.86
LRP11-201ENST00000239367 FOXD4L3Q6VB84 417 aaPredicted RBP20.41■□□□□ 0.86
LRP11-201ENST00000239367 C1orf115Q9H7X2 142 aa20.41■□□□□ 0.86
LRP11-201ENST00000239367 ANKRD45Q5TZF3 282 aa20.4■□□□□ 0.86
LRP11-201ENST00000239367 PDCL3Q9H2J4 239 aa20.4■□□□□ 0.86
LRP11-201ENST00000239367 PIK3C2BO00750 1634 aa20.4■□□□□ 0.86
LRP11-201ENST00000239367 POGZQ7Z3K3 1410 aa20.4■□□□□ 0.86
LRP11-201ENST00000239367 MED14O60244 1454 aa20.4■□□□□ 0.86
LRP11-201ENST00000239367 TPM2P07951 284 aa20.4■□□□□ 0.86
LRP11-201ENST00000239367 NEXMIFQ5QGS0 1516 aa20.4■□□□□ 0.86
LRP11-201ENST00000239367 CFAP74Q9C0B2 1584 aa20.39■□□□□ 0.86
LRP11-201ENST00000239367 APBB1O00213 710 aa20.39■□□□□ 0.86
LRP11-201ENST00000239367 GGT6Q6P531 493 aa20.39■□□□□ 0.86
LRP11-201ENST00000239367 CABP2Q9NPB3 220 aa20.39■□□□□ 0.86
LRP11-201ENST00000239367 CAMSAP1Q5T5Y3 1602 aa20.39■□□□□ 0.85
LRP11-201ENST00000239367 A0A1W2PP64 1363 aa20.39■□□□□ 0.85
LRP11-201ENST00000239367 IPO8O15397 1037 aaKnown RBP20.39■□□□□ 0.85
LRP11-201ENST00000239367 DNTTIP2Q5QJE6 756 aaKnown RBP20.39■□□□□ 0.85
LRP11-201ENST00000239367 ZBTB40Q9NUA8 1239 aa20.39■□□□□ 0.85
LRP11-201ENST00000239367 KIF16BQ96L93 1317 aa20.39■□□□□ 0.85
LRP11-201ENST00000239367 RNF214Q8ND24 703 aa20.38■□□□□ 0.85
LRP11-201ENST00000239367 NOB1Q9ULX3 412 aaKnown RBP20.38■□□□□ 0.85
LRP11-201ENST00000239367 CD2BP2O95400 341 aaKnown RBP20.38■□□□□ 0.85
LRP11-201ENST00000239367 SAFB2Q14151 953 aaKnown RBP eCLIP20.38■□□□□ 0.85
LRP11-201ENST00000239367 ELL2O00472 640 aaPredicted RBP20.37■□□□□ 0.85
LRP11-201ENST00000239367 CHAMP1Q96JM3 812 aa20.37■□□□□ 0.85
LRP11-201ENST00000239367 ZHX1Q9UKY1 873 aaPredicted RBP20.37■□□□□ 0.85
LRP11-201ENST00000239367 ZFYVE9O95405 1425 aa20.36■□□□□ 0.85
LRP11-201ENST00000239367 ALDH1L2Q3SY69 923 aa20.36■□□□□ 0.85
LRP11-201ENST00000239367 RBM25P49756 843 aaKnown RBP20.36■□□□□ 0.85
LRP11-201ENST00000239367 ZSCAN30Q86W11 494 aa20.36■□□□□ 0.85
LRP11-201ENST00000239367 PTMAP06454 111 aaKnown RBP20.35■□□□□ 0.85
LRP11-201ENST00000239367 NUCB1Q02818 461 aa20.35■□□□□ 0.85
LRP11-201ENST00000239367 CALD1Q05682 793 aaKnown RBP20.35■□□□□ 0.85
LRP11-201ENST00000239367 TMEM57Q8N5G2 664 aa20.35■□□□□ 0.85
LRP11-201ENST00000239367 NCOA3Q9Y6Q9 1424 aa20.35■□□□□ 0.85
LRP11-201ENST00000239367 ATAD2Q6PL18 1390 aa20.35■□□□□ 0.85
LRP11-201ENST00000239367 SNX21Q969T3 373 aa20.34■□□□□ 0.85
LRP11-201ENST00000239367 ANKRD26Q9UPS8 1709 aa20.34■□□□□ 0.85
LRP11-201ENST00000239367 RIPK4P57078 832 aa20.33■□□□□ 0.85
LRP11-201ENST00000239367 TERF2IPQ9NYB0 399 aa20.33■□□□□ 0.85
LRP11-201ENST00000239367 CFAP65Q6ZU64 1925 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms