RNA–Protein interactions for RNA: ENST00000233838.8

GGCX-201, Transcript of gamma-glutamyl carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGCX, Length 7,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-201ENST00000233838 FGD5Q6ZNL6 1462 aa9.52□□□□□ -0.89
GGCX-201ENST00000233838 SEPT7Q16181 437 aaKnown RBP9.52□□□□□ -0.89
GGCX-201ENST00000233838 AXDND1Q5T1B0 1012 aaPredicted RBP9.52□□□□□ -0.89
GGCX-201ENST00000233838 ZRSR2Q15696 482 aaKnown RBP9.52□□□□□ -0.89
GGCX-201ENST00000233838 DHX37Q8IY37 1157 aaKnown RBP9.52□□□□□ -0.89
GGCX-201ENST00000233838 SPC24Q8NBT2 197 aa9.52□□□□□ -0.89
GGCX-201ENST00000233838 RBM42Q9BTD8 480 aaKnown RBP9.52□□□□□ -0.89
GGCX-201ENST00000233838 CAVIN1Q6NZI2 390 aaKnown RBP9.51□□□□□ -0.89
GGCX-201ENST00000233838 KINO60870 393 aaKnown RBP9.51□□□□□ -0.89
GGCX-201ENST00000233838 TSPYL1Q9H0U9 437 aa9.51□□□□□ -0.89
GGCX-201ENST00000233838 MIA2Q96PC5 1412 aa9.51□□□□□ -0.89
GGCX-201ENST00000233838 CCP110O43303 1012 aa9.51□□□□□ -0.89
GGCX-201ENST00000233838 ERLIN2O94905 339 aa9.51□□□□□ -0.89
GGCX-201ENST00000233838 ENOX2Q16206 610 aaKnown RBP9.51□□□□□ -0.89
GGCX-201ENST00000233838 ZNF428Q96B54 188 aa9.51□□□□□ -0.89
GGCX-201ENST00000233838 CABP2Q9NPB3 220 aa9.51□□□□□ -0.89
GGCX-201ENST00000233838 ZHX3Q9H4I2 956 aa9.51□□□□□ -0.89
GGCX-201ENST00000233838 SYNJ1O43426 1573 aa9.51□□□□□ -0.89
GGCX-201ENST00000233838 ZNF396Q96N95 335 aaPredicted RBP9.51□□□□□ -0.89
GGCX-201ENST00000233838 CNNM1Q9NRU3 951 aa9.51□□□□□ -0.89
GGCX-201ENST00000233838 LEKR1Q6ZMV7 388 aa9.5□□□□□ -0.89
GGCX-201ENST00000233838 TANGO6Q9C0B7 1094 aa9.5□□□□□ -0.89
GGCX-201ENST00000233838 STK3Q13188 491 aa9.5□□□□□ -0.89
GGCX-201ENST00000233838 MAP4K4O95819 1239 aaPredicted RBP9.5□□□□□ -0.89
GGCX-201ENST00000233838 CCDC30Q5VVM6 783 aa9.5□□□□□ -0.89
GGCX-201ENST00000233838 PDCL3Q9H2J4 239 aa9.5□□□□□ -0.89
GGCX-201ENST00000233838 WASHC2AQ641Q2 1341 aa9.5□□□□□ -0.89
GGCX-201ENST00000233838 GGNBP2Q9H3C7 697 aa9.49□□□□□ -0.89
GGCX-201ENST00000233838 TOP2BQ02880 1626 aa9.49□□□□□ -0.89
GGCX-201ENST00000233838 SERPINC1P01008 464 aa9.49□□□□□ -0.89
GGCX-201ENST00000233838 DEF6Q9H4E7 631 aa9.49□□□□□ -0.89
GGCX-201ENST00000233838 C1orf115Q9H7X2 142 aa9.49□□□□□ -0.89
GGCX-201ENST00000233838 KIF7Q2M1P5 1343 aa9.49□□□□□ -0.89
GGCX-201ENST00000233838 GOLGA6L10A6NI86 522 aa9.49□□□□□ -0.89
GGCX-201ENST00000233838 PRPF40AO75400 957 aaKnown RBP9.49□□□□□ -0.89
GGCX-201ENST00000233838 MATR3P43243 847 aaKnown RBP eCLIP9.49□□□□□ -0.89
GGCX-201ENST00000233838 JPH4Q96JJ6 628 aa9.49□□□□□ -0.89
GGCX-201ENST00000233838 CCDC181Q5TID7 509 aa9.49□□□□□ -0.89
GGCX-201ENST00000233838 ANKRD18AQ8IVF6 992 aa9.49□□□□□ -0.89
GGCX-201ENST00000233838 SURF6O75683 361 aaKnown RBP9.49□□□□□ -0.89
GGCX-201ENST00000233838 LRRC9Q6ZRR7 1453 aa9.48□□□□□ -0.89
GGCX-201ENST00000233838 STK38Q15208 465 aa9.48□□□□□ -0.89
GGCX-201ENST00000233838 HSP90AB3PQ58FF7 597 aa9.48□□□□□ -0.89
GGCX-201ENST00000233838 CCDC158Q5M9N0 1113 aa9.48□□□□□ -0.89
GGCX-201ENST00000233838 SEPT11Q9NVA2 429 aaKnown RBP9.48□□□□□ -0.89
GGCX-201ENST00000233838 ZNHIT6Q9NWK9 470 aaKnown RBP9.48□□□□□ -0.89
GGCX-201ENST00000233838 HIP1O00291 1037 aa9.48□□□□□ -0.89
GGCX-201ENST00000233838 CT47B1P0C2W7 299 aaPredicted RBP9.48□□□□□ -0.89
GGCX-201ENST00000233838 NFKBIBQ15653 356 aa9.48□□□□□ -0.89
GGCX-201ENST00000233838 CCDC69A6NI79 296 aa9.48□□□□□ -0.89
GGCX-201ENST00000233838 RBM5P52756 815 aaKnown RBP eCLIP9.48□□□□□ -0.898e-6■■■■□ 20.7
GGCX-201ENST00000233838 SMG6Q86US8 1419 aaKnown RBP9.48□□□□□ -0.89
GGCX-201ENST00000233838 FANCIQ9NVI1 1328 aa9.48□□□□□ -0.89
GGCX-201ENST00000233838 MRE11P49959 708 aa9.48□□□□□ -0.89
GGCX-201ENST00000233838 CLASRPQ8N2M8 674 aaKnown RBP9.48□□□□□ -0.89
GGCX-201ENST00000233838 NCAPD3P42695 1498 aa9.48□□□□□ -0.89
GGCX-201ENST00000233838 CYB5RLQ6IPT4 315 aa9.47□□□□□ -0.89
GGCX-201ENST00000233838 IGF1RP08069 1367 aa9.47□□□□□ -0.89
GGCX-201ENST00000233838 STRN4Q9NRL3 753 aa9.47□□□□□ -0.89
GGCX-201ENST00000233838 GNL3LQ9NVN8 582 aaKnown RBP9.47□□□□□ -0.89
GGCX-201ENST00000233838 FIBPO43427 364 aa9.47□□□□□ -0.89
GGCX-201ENST00000233838 TRAK2O60296 914 aa9.47□□□□□ -0.89
GGCX-201ENST00000233838 PPFIBP1Q86W92 1011 aa9.47□□□□□ -0.89
GGCX-201ENST00000233838 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.47□□□□□ -0.89
GGCX-201ENST00000233838 FAM193AP78312 1265 aa9.47□□□□□ -0.89
GGCX-201ENST00000233838 RBM10P98175 930 aaKnown RBP9.47□□□□□ -0.89
GGCX-201ENST00000233838 CENPHQ9H3R5 247 aa9.47□□□□□ -0.89
GGCX-201ENST00000233838 PIP4K2AP48426 406 aaPredicted RBP9.46□□□□□ -0.89
GGCX-201ENST00000233838 NEK4P51957 841 aa9.46□□□□□ -0.89
GGCX-201ENST00000233838 GAPVD1Q14C86 1478 aa9.46□□□□□ -0.89
GGCX-201ENST00000233838 IBSPP21815 317 aaPredicted RBP9.46□□□□□ -0.89
GGCX-201ENST00000233838 NUP133Q8WUM0 1156 aa9.46□□□□□ -0.89
GGCX-201ENST00000233838 SIL1Q9H173 461 aa9.46□□□□□ -0.89
GGCX-201ENST00000233838 TAX1BP1Q86VP1 789 aa9.46□□□□□ -0.9
GGCX-201ENST00000233838 ABTB2Q8N961 1025 aa9.46□□□□□ -0.9
GGCX-201ENST00000233838 FGD6Q6ZV73 1430 aa9.46□□□□□ -0.9
GGCX-201ENST00000233838 FYCO1Q9BQS8 1478 aa9.46□□□□□ -0.9
GGCX-201ENST00000233838 ERC1Q8IUD2 1116 aa9.46□□□□□ -0.9
GGCX-201ENST00000233838 MPHOSPH10O00566 681 aaKnown RBP9.46□□□□□ -0.9
GGCX-201ENST00000233838 STIM1Q13586 685 aa9.46□□□□□ -0.9
GGCX-201ENST00000233838 FAM177A1Q8N128 213 aaPredicted RBP9.46□□□□□ -0.9
GGCX-201ENST00000233838 DACH1Q9UI36 760 aa9.46□□□□□ -0.9
GGCX-201ENST00000233838 NLRP6P59044 892 aa9.45□□□□□ -0.9
GGCX-201ENST00000233838 CNTLNQ9NXG0 1405 aa9.45□□□□□ -0.9
GGCX-201ENST00000233838 CCDC66A2RUB6 948 aa9.45□□□□□ -0.9
GGCX-201ENST00000233838 NEBLO76041 1014 aa9.45□□□□□ -0.9
GGCX-201ENST00000233838 ESCO1Q5FWF5 840 aa9.45□□□□□ -0.9
GGCX-201ENST00000233838 CASKIN1Q8WXD9 1431 aa9.45□□□□□ -0.9
GGCX-201ENST00000233838 GBP2P32456 591 aaPredicted RBP9.45□□□□□ -0.9
GGCX-201ENST00000233838 MYOM3Q5VTT5 1437 aa9.45□□□□□ -0.9
GGCX-201ENST00000233838 RRBP1Q9P2E9 1410 aaKnown RBP9.45□□□□□ -0.9
GGCX-201ENST00000233838 KIAA0754O94854 1291 aa9.45□□□□□ -0.9
GGCX-201ENST00000233838 EFCAB5A4FU69 1503 aa9.45□□□□□ -0.9
GGCX-201ENST00000233838 TNMDQ9H2S6 317 aa9.45□□□□□ -0.9
GGCX-201ENST00000233838 GNAI3P08754 354 aa9.44□□□□□ -0.9
GGCX-201ENST00000233838 PLEKHO1Q53GL0 409 aaPredicted RBP9.44□□□□□ -0.9
GGCX-201ENST00000233838 SOGA3Q5TF21 947 aa9.44□□□□□ -0.9
GGCX-201ENST00000233838 CCDC97Q96F63 343 aaPredicted RBP9.44□□□□□ -0.9
GGCX-201ENST00000233838 NOB1Q9ULX3 412 aaKnown RBP9.44□□□□□ -0.9
GGCX-201ENST00000233838 GPRASP1Q5JY77 1395 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms