RNA–Protein interactions for RNA: ENST00000231524.13

TRIM23-201, Transcript of tripartite motif containing 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM23, Length 4,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-201ENST00000231524 KIF14Q15058 1648 aa11.87□□□□□ -0.51
TRIM23-201ENST00000231524 MAPK8IP2Q13387 824 aaPredicted RBP11.87□□□□□ -0.51
TRIM23-201ENST00000231524 SNX21Q969T3 373 aa11.87□□□□□ -0.51
TRIM23-201ENST00000231524 NUP160Q12769 1436 aa11.87□□□□□ -0.51
TRIM23-201ENST00000231524 TBC1D9Q6ZT07 1266 aa11.87□□□□□ -0.51
TRIM23-201ENST00000231524 OS9Q13438 667 aaPredicted RBP11.86□□□□□ -0.51
TRIM23-201ENST00000231524 PPP4R3BQ5MIZ7 849 aa11.86□□□□□ -0.51
TRIM23-201ENST00000231524 GGNBP2Q9H3C7 697 aa11.86□□□□□ -0.51
TRIM23-201ENST00000231524 ZNF830Q96NB3 372 aaPredicted RBP11.86□□□□□ -0.51
TRIM23-201ENST00000231524 NRDCO43847 1150 aa11.86□□□□□ -0.51
TRIM23-201ENST00000231524 CEP170Q5SW79 1584 aa11.85□□□□□ -0.51
TRIM23-201ENST00000231524 HAP1P54257 671 aaPredicted RBP11.85□□□□□ -0.51
TRIM23-201ENST00000231524 SOX12O15370 315 aa11.85□□□□□ -0.51
TRIM23-201ENST00000231524 DIAPH1O60610 1272 aaKnown RBP11.85□□□□□ -0.51
TRIM23-201ENST00000231524 MCM5P33992 734 aa11.85□□□□□ -0.51
TRIM23-201ENST00000231524 HDGFL2Q7Z4V5 671 aaPredicted RBP11.85□□□□□ -0.51
TRIM23-201ENST00000231524 BLMP54132 1417 aaPredicted RBP11.85□□□□□ -0.51
TRIM23-201ENST00000231524 TCOF1Q13428 1488 aaKnown RBP11.85□□□□□ -0.51
TRIM23-201ENST00000231524 API5Q9BZZ5 524 aaKnown RBP11.85□□□□□ -0.51
TRIM23-201ENST00000231524 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRIM23-201ENST00000231524 RBSNQ9H1K0 784 aa11.84□□□□□ -0.51
TRIM23-201ENST00000231524 USP25Q9UHP3 1055 aa11.84□□□□□ -0.51
TRIM23-201ENST00000231524 CCDC141Q6ZP82 1450 aa11.84□□□□□ -0.51
TRIM23-201ENST00000231524 ZMYM4Q5VZL5 1548 aa11.84□□□□□ -0.51
TRIM23-201ENST00000231524 IGSF3O75054 1194 aa11.84□□□□□ -0.51
TRIM23-201ENST00000231524 CT47B1P0C2W7 299 aaPredicted RBP11.84□□□□□ -0.51
TRIM23-201ENST00000231524 CCDC27Q2M243 656 aa11.84□□□□□ -0.51
TRIM23-201ENST00000231524 BMP2KLQ5H9B9 411 aa11.84□□□□□ -0.51
TRIM23-201ENST00000231524 ATP6V1DQ9Y5K8 247 aa11.84□□□□□ -0.51
TRIM23-201ENST00000231524 FAM177BA6PVY3 158 aa11.84□□□□□ -0.51
TRIM23-201ENST00000231524 FGD1P98174 961 aa11.84□□□□□ -0.51
TRIM23-201ENST00000231524 NOL7Q9UMY1 257 aaKnown RBP11.84□□□□□ -0.51
TRIM23-201ENST00000231524 KDM5BQ9UGL1 1544 aa11.83□□□□□ -0.51
TRIM23-201ENST00000231524 HDAC1Q13547 482 aaPredicted RBP11.83□□□□□ -0.52
TRIM23-201ENST00000231524 TMEM132EQ6IEE7 984 aa11.83□□□□□ -0.52
TRIM23-201ENST00000231524 TERF2IPQ9NYB0 399 aa11.83□□□□□ -0.52
TRIM23-201ENST00000231524 SMAP1Q8IYB5 467 aaPredicted RBP11.83□□□□□ -0.52
TRIM23-201ENST00000231524 TAOK2Q9UL54 1235 aa11.83□□□□□ -0.52
TRIM23-201ENST00000231524 PZPP20742 1482 aa11.83□□□□□ -0.52
TRIM23-201ENST00000231524 NUTM2FA1L443 756 aa11.83□□□□□ -0.52
TRIM23-201ENST00000231524 FIBPO43427 364 aa11.83□□□□□ -0.52
TRIM23-201ENST00000231524 GDPD2Q9HCC8 539 aa11.83□□□□□ -0.52
TRIM23-201ENST00000231524 CGNQ9P2M7 1197 aaKnown RBP11.83□□□□□ -0.52
TRIM23-201ENST00000231524 SAMD9Q5K651 1589 aa11.83□□□□□ -0.52
TRIM23-201ENST00000231524 HMOX1P09601 288 aa11.82□□□□□ -0.52
TRIM23-201ENST00000231524 HS1BP3Q53T59 392 aa11.82□□□□□ -0.52
TRIM23-201ENST00000231524 BBXQ8WY36 941 aaPredicted RBP11.82□□□□□ -0.52
TRIM23-201ENST00000231524 CCDC94Q9BW85 323 aaPredicted RBP11.82□□□□□ -0.52
TRIM23-201ENST00000231524 KDM6BO15054 1643 aa11.82□□□□□ -0.52
TRIM23-201ENST00000231524 NAP1L2Q9ULW6 460 aaPredicted RBP11.82□□□□□ -0.52
TRIM23-201ENST00000231524 MAGI3Q5TCQ9 1506 aa11.81□□□□□ -0.52
TRIM23-201ENST00000231524 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.81□□□□□ -0.52
TRIM23-201ENST00000231524 VPS37CA5D8V6 355 aaPredicted RBP11.81□□□□□ -0.52
TRIM23-201ENST00000231524 NUCB1Q02818 461 aa11.81□□□□□ -0.52
TRIM23-201ENST00000231524 LRSAM1Q6UWE0 723 aa11.81□□□□□ -0.52
TRIM23-201ENST00000231524 NPHP1O15259 732 aa11.81□□□□□ -0.52
TRIM23-201ENST00000231524 TMPOP42166 694 aaKnown RBP11.81□□□□□ -0.52
TRIM23-201ENST00000231524 CD109Q6YHK3 1445 aa11.81□□□□□ -0.52
TRIM23-201ENST00000231524 PPP1R9BQ96SB3 815 aa11.81□□□□□ -0.52
TRIM23-201ENST00000231524 GPRASP1Q5JY77 1395 aa11.81□□□□□ -0.52
TRIM23-201ENST00000231524 TSC1Q92574 1164 aa11.8□□□□□ -0.52
TRIM23-201ENST00000231524 EVC2Q86UK5 1308 aa11.8□□□□□ -0.52
TRIM23-201ENST00000231524 STAC3Q96MF2 364 aa11.8□□□□□ -0.52
TRIM23-201ENST00000231524 TTC12Q9H892 705 aaPredicted RBP11.8□□□□□ -0.52
TRIM23-201ENST00000231524 SMC3Q9UQE7 1217 aa11.8□□□□□ -0.52
TRIM23-201ENST00000231524 RBM25P49756 843 aaKnown RBP11.8□□□□□ -0.52
TRIM23-201ENST00000231524 TERF1P54274 439 aa11.8□□□□□ -0.52
TRIM23-201ENST00000231524 CABP2Q9NPB3 220 aa11.8□□□□□ -0.52
TRIM23-201ENST00000231524 PRAG1Q86YV5 1406 aa11.8□□□□□ -0.52
TRIM23-201ENST00000231524 ERC2O15083 957 aa11.79□□□□□ -0.52
TRIM23-201ENST00000231524 GOLGA6L19H0YKK7 550 aa11.79□□□□□ -0.52
TRIM23-201ENST00000231524 NOLC1Q14978 699 aaKnown RBP eCLIP11.79□□□□□ -0.52
TRIM23-201ENST00000231524 TPD52L1Q16890 204 aaPredicted RBP11.79□□□□□ -0.52
TRIM23-201ENST00000231524 LMOD2Q6P5Q4 547 aa11.79□□□□□ -0.52
TRIM23-201ENST00000231524 UHRF1BP1Q6BDS2 1440 aa11.79□□□□□ -0.52
TRIM23-201ENST00000231524 CCDC66A2RUB6 948 aa11.79□□□□□ -0.52
TRIM23-201ENST00000231524 FAM184AQ8NB25 1140 aa11.79□□□□□ -0.52
TRIM23-201ENST00000231524 TRIM5Q9C035 493 aa11.79□□□□□ -0.52
TRIM23-201ENST00000231524 HDGFP51858 240 aaKnown RBP11.79□□□□□ -0.52
TRIM23-201ENST00000231524 GNAI1P63096 354 aa11.79□□□□□ -0.52
TRIM23-201ENST00000231524 PRIMPOLQ96LW4 560 aa11.79□□□□□ -0.52
TRIM23-201ENST00000231524 MCM2P49736 904 aa11.78□□□□□ -0.52
TRIM23-201ENST00000231524 ZNF521Q96K83 1311 aa11.78□□□□□ -0.52
TRIM23-201ENST00000231524 VGFO15240 615 aaPredicted RBP11.78□□□□□ -0.52
TRIM23-201ENST00000231524 ADCY5O95622 1261 aa11.78□□□□□ -0.52
TRIM23-201ENST00000231524 PRKAR2BP31323 418 aa11.78□□□□□ -0.52
TRIM23-201ENST00000231524 LMOD3Q0VAK6 560 aa11.78□□□□□ -0.52
TRIM23-201ENST00000231524 ZGPATQ8N5A5 531 aaKnown RBP11.78□□□□□ -0.52
TRIM23-201ENST00000231524 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.78□□□□□ -0.52
TRIM23-201ENST00000231524 DENND4BO75064 1496 aaPredicted RBP11.78□□□□□ -0.52
TRIM23-201ENST00000231524 ADGRL1O94910 1474 aa11.78□□□□□ -0.52
TRIM23-201ENST00000231524 BECN2A8MW95 431 aa11.78□□□□□ -0.52
TRIM23-201ENST00000231524 TPM3P06753 285 aa11.78□□□□□ -0.52
TRIM23-201ENST00000231524 ERICH4A6NGS2 130 aa11.77□□□□□ -0.52
TRIM23-201ENST00000231524 HTATSF1O43719 755 aaKnown RBP11.77□□□□□ -0.52
TRIM23-201ENST00000231524 UPF3BQ9BZI7 483 aaKnown RBP11.77□□□□□ -0.52
TRIM23-201ENST00000231524 NSD3Q9BZ95 1437 aa11.77□□□□□ -0.53
TRIM23-201ENST00000231524 TWISTNBQ3B726 338 aaPredicted RBP11.77□□□□□ -0.53
TRIM23-201ENST00000231524 CCDC112Q8NEF3 446 aa11.77□□□□□ -0.53
TRIM23-201ENST00000231524 THUMPD2Q9BTF0 503 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms