RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 NOB1Q9ULX3 412 aaKnown RBP16.54■□□□□ 0.24
HCFC2-201ENST00000229330 KIAA1107Q9UPP5 1409 aa16.54■□□□□ 0.24
HCFC2-201ENST00000229330 PLEKHH2Q8IVE3 1493 aa16.54■□□□□ 0.24
HCFC2-201ENST00000229330 DAPK1P53355 1430 aa16.54■□□□□ 0.24
HCFC2-201ENST00000229330 DYNC1I1O14576 645 aa16.54■□□□□ 0.24
HCFC2-201ENST00000229330 XRCC6P12956 609 aaKnown RBP eCLIP16.54■□□□□ 0.24
HCFC2-201ENST00000229330 ERICH4A6NGS2 130 aa16.54■□□□□ 0.24
HCFC2-201ENST00000229330 H0YHG0 523 aa16.54■□□□□ 0.24
HCFC2-201ENST00000229330 CPLX2Q6PUV4 134 aaKnown RBP16.54■□□□□ 0.24
HCFC2-201ENST00000229330 IQGAP2Q13576 1575 aa16.54■□□□□ 0.24
HCFC2-201ENST00000229330 TNPO1Q92973 898 aaKnown RBP16.54■□□□□ 0.24
HCFC2-201ENST00000229330 MCM5P33992 734 aa16.53■□□□□ 0.24
HCFC2-201ENST00000229330 CFAP70Q5T0N1 1121 aa16.53■□□□□ 0.24
HCFC2-201ENST00000229330 PATL2C9JE40 543 aaKnown RBP16.53■□□□□ 0.24
HCFC2-201ENST00000229330 ERC2O15083 957 aa16.53■□□□□ 0.24
HCFC2-201ENST00000229330 C1orf115Q9H7X2 142 aa16.53■□□□□ 0.24
HCFC2-201ENST00000229330 PDCP20941 246 aa16.52■□□□□ 0.24
HCFC2-201ENST00000229330 MTHFSP49914 203 aa16.52■□□□□ 0.24
HCFC2-201ENST00000229330 SMC2O95347 1197 aa16.52■□□□□ 0.24
HCFC2-201ENST00000229330 CT47B1P0C2W7 299 aaPredicted RBP16.52■□□□□ 0.24
HCFC2-201ENST00000229330 WDR63Q8IWG1 891 aa16.52■□□□□ 0.24
HCFC2-201ENST00000229330 CPLX1O14810 134 aa16.52■□□□□ 0.24
HCFC2-201ENST00000229330 CALRP27797 417 aaKnown RBP16.52■□□□□ 0.24
HCFC2-201ENST00000229330 RDXP35241 583 aaKnown RBP16.52■□□□□ 0.23
HCFC2-201ENST00000229330 TOMM22Q9NS69 142 aa16.52■□□□□ 0.23
HCFC2-201ENST00000229330 TRIM29Q14134 588 aa16.52■□□□□ 0.23
HCFC2-201ENST00000229330 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.51■□□□□ 0.23
HCFC2-201ENST00000229330 PCF11O94913 1555 aaKnown RBP16.51■□□□□ 0.23
HCFC2-201ENST00000229330 TAF7LQ5H9L4 462 aa16.51■□□□□ 0.23
HCFC2-201ENST00000229330 PDILTQ8N807 584 aa16.51■□□□□ 0.23
HCFC2-201ENST00000229330 CUL7Q14999 1698 aa16.51■□□□□ 0.23
HCFC2-201ENST00000229330 SCAPERQ9BY12 1400 aa16.51■□□□□ 0.23
HCFC2-201ENST00000229330 KINO60870 393 aaKnown RBP16.51■□□□□ 0.23
HCFC2-201ENST00000229330 CLSTN1O94985 981 aa16.51■□□□□ 0.23
HCFC2-201ENST00000229330 FKBP5Q13451 457 aaPredicted RBP16.51■□□□□ 0.23
HCFC2-201ENST00000229330 ATF7IPQ6VMQ6 1270 aa16.51■□□□□ 0.23
HCFC2-201ENST00000229330 HSP90AB4PQ58FF6 505 aa16.51■□□□□ 0.23
HCFC2-201ENST00000229330 PSMA5P28066 241 aa16.5■□□□□ 0.23
HCFC2-201ENST00000229330 MAPK8IP2Q13387 824 aaPredicted RBP16.5■□□□□ 0.23
HCFC2-201ENST00000229330 DHX8Q14562 1220 aaKnown RBP16.5■□□□□ 0.23
HCFC2-201ENST00000229330 FOSBP53539 338 aa16.5■□□□□ 0.23
HCFC2-201ENST00000229330 NBPF1Q3BBV0 1214 aa16.5■□□□□ 0.23
HCFC2-201ENST00000229330 OLFM4Q6UX06 510 aa16.5■□□□□ 0.23
HCFC2-201ENST00000229330 SYNE3Q6ZMZ3 975 aa16.5■□□□□ 0.23
HCFC2-201ENST00000229330 TNMDQ9H2S6 317 aa16.5■□□□□ 0.23
HCFC2-201ENST00000229330 UNC13AQ9UPW8 1703 aa16.5■□□□□ 0.23
HCFC2-201ENST00000229330 TSPYL1Q9H0U9 437 aa16.5■□□□□ 0.23
HCFC2-201ENST00000229330 CGNQ9P2M7 1197 aaKnown RBP16.49■□□□□ 0.23
HCFC2-201ENST00000229330 TSR2Q969E8 191 aaKnown RBP16.49■□□□□ 0.23
HCFC2-201ENST00000229330 CABP2Q9NPB3 220 aa16.49■□□□□ 0.23
HCFC2-201ENST00000229330 C9orf78Q9NZ63 289 aaPredicted RBP16.48■□□□□ 0.23
HCFC2-201ENST00000229330 CNTROBQ8N137 903 aa16.48■□□□□ 0.23
HCFC2-201ENST00000229330 CCDC9Q9Y3X0 531 aaKnown RBP16.48■□□□□ 0.23
HCFC2-201ENST00000229330 SSFA2P28290 1259 aa16.48■□□□□ 0.23
HCFC2-201ENST00000229330 PPP4R3BQ5MIZ7 849 aa16.48■□□□□ 0.23
HCFC2-201ENST00000229330 PCMTD1Q96MG8 357 aaPredicted RBP16.48■□□□□ 0.23
HCFC2-201ENST00000229330 AEBP1Q8IUX7 1158 aa16.48■□□□□ 0.23
HCFC2-201ENST00000229330 PANK2Q9BZ23 570 aa16.48■□□□□ 0.23
HCFC2-201ENST00000229330 CALCOCO1Q9P1Z2 691 aa16.47■□□□□ 0.23
HCFC2-201ENST00000229330 URB2Q14146 1524 aaKnown RBP16.47■□□□□ 0.23
HCFC2-201ENST00000229330 CDR1P51861 262 aa16.47■□□□□ 0.23
HCFC2-201ENST00000229330 AKAP17AQ02040 695 aaKnown RBP16.47■□□□□ 0.23
HCFC2-201ENST00000229330 NAIPQ13075 1403 aa16.47■□□□□ 0.23
HCFC2-201ENST00000229330 TBC1D32Q96NH3 1257 aa16.46■□□□□ 0.23
HCFC2-201ENST00000229330 GGNBP2Q9H3C7 697 aa16.46■□□□□ 0.23
HCFC2-201ENST00000229330 LRRFIP1Q32MZ4 808 aaKnown RBP16.46■□□□□ 0.23
HCFC2-201ENST00000229330 NCOA1Q15788 1441 aa16.46■□□□□ 0.23
HCFC2-201ENST00000229330 KRT85P78386 507 aa16.46■□□□□ 0.22
HCFC2-201ENST00000229330 FMNL2Q96PY5 1086 aa16.46■□□□□ 0.22
HCFC2-201ENST00000229330 HMOX1P09601 288 aa16.45■□□□□ 0.22
HCFC2-201ENST00000229330 G3BP1Q13283 466 aaKnown RBP eCLIP16.45■□□□□ 0.22
HCFC2-201ENST00000229330 NECTIN2Q92692 538 aa16.45■□□□□ 0.22
HCFC2-201ENST00000229330 PDE4CQ08493 712 aa16.45■□□□□ 0.22
HCFC2-201ENST00000229330 CEP89Q96ST8 783 aa16.45■□□□□ 0.22
HCFC2-201ENST00000229330 PRIMPOLQ96LW4 560 aa16.44■□□□□ 0.22
HCFC2-201ENST00000229330 GRIN2AQ12879 1464 aa16.44■□□□□ 0.22
HCFC2-201ENST00000229330 NUP62CLQ9H1M0 184 aa16.44■□□□□ 0.22
HCFC2-201ENST00000229330 PLB1Q6P1J6 1458 aa16.43■□□□□ 0.22
HCFC2-201ENST00000229330 EIF3JO75822 258 aaKnown RBP16.43■□□□□ 0.22
HCFC2-201ENST00000229330 DEF6Q9H4E7 631 aa16.43■□□□□ 0.22
HCFC2-201ENST00000229330 EIF2S2P20042 333 aaKnown RBP16.43■□□□□ 0.22
HCFC2-201ENST00000229330 KLHL40Q2TBA0 621 aa16.43■□□□□ 0.22
HCFC2-201ENST00000229330 BIVM-ERCC5R4GMW8 1640 aa16.43■□□□□ 0.22
HCFC2-201ENST00000229330 WWC1Q8IX03 1113 aa16.43■□□□□ 0.22
HCFC2-201ENST00000229330 CAGE1Q8TC20 777 aa16.43■□□□□ 0.22
HCFC2-201ENST00000229330 ARHGEF11O15085 1522 aa16.43■□□□□ 0.22
HCFC2-201ENST00000229330 LRPPRCP42704 1394 aaKnown RBP16.42■□□□□ 0.22
HCFC2-201ENST00000229330 C1orf141Q5JVX7 400 aa16.42■□□□□ 0.22
HCFC2-201ENST00000229330 ERBINQ96RT1 1412 aa16.42■□□□□ 0.22
HCFC2-201ENST00000229330 ERLIN1O75477 346 aa16.42■□□□□ 0.22
HCFC2-201ENST00000229330 RAPGEF3O95398 923 aa16.42■□□□□ 0.22
HCFC2-201ENST00000229330 GNAI3P08754 354 aa16.42■□□□□ 0.22
HCFC2-201ENST00000229330 UBTFL1P0CB47 393 aaPredicted RBP16.42■□□□□ 0.22
HCFC2-201ENST00000229330 MAGI1Q96QZ7 1491 aaPredicted RBP16.42■□□□□ 0.22
HCFC2-201ENST00000229330 AXDND1Q5T1B0 1012 aaPredicted RBP16.42■□□□□ 0.22
HCFC2-201ENST00000229330 NKTRP30414 1462 aaKnown RBP16.42■□□□□ 0.22
HCFC2-201ENST00000229330 PSME1Q06323 249 aa16.42■□□□□ 0.22
HCFC2-201ENST00000229330 TWISTNBQ3B726 338 aaPredicted RBP16.42■□□□□ 0.22
HCFC2-201ENST00000229330 TSPYL4Q9UJ04 414 aa16.42■□□□□ 0.22
HCFC2-201ENST00000229330 CCDC183Q5T5S1 534 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms