RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 SSH1Q8WYL5 1049 aa17.58■□□□□ 0.4
SCNN1A-201ENST00000228916 NPATQ14207 1427 aa17.57■□□□□ 0.4
SCNN1A-201ENST00000228916 EXOSC9Q06265 439 aaKnown RBP17.57■□□□□ 0.4
SCNN1A-201ENST00000228916 ERBB4Q15303 1308 aa17.57■□□□□ 0.4
SCNN1A-201ENST00000228916 GLIPR1L2Q4G1C9 344 aa17.57■□□□□ 0.4
SCNN1A-201ENST00000228916 ITPRIPQ8IWB1 547 aa17.57■□□□□ 0.4
SCNN1A-201ENST00000228916 TNPO1Q92973 898 aaKnown RBP17.57■□□□□ 0.4
SCNN1A-201ENST00000228916 RRP9O43818 475 aaKnown RBP17.56■□□□□ 0.4
SCNN1A-201ENST00000228916 HSP90AA1P07900 732 aaKnown RBP17.56■□□□□ 0.4
SCNN1A-201ENST00000228916 ZBTB40Q9NUA8 1239 aa17.56■□□□□ 0.4
SCNN1A-201ENST00000228916 CD109Q6YHK3 1445 aa17.56■□□□□ 0.4
SCNN1A-201ENST00000228916 NUCB1Q02818 461 aa17.55■□□□□ 0.4
SCNN1A-201ENST00000228916 RAB3GAP1Q15042 981 aa17.55■□□□□ 0.4
SCNN1A-201ENST00000228916 PUS7Q96PZ0 661 aaKnown RBP17.55■□□□□ 0.4
SCNN1A-201ENST00000228916 ANKRD36BQ8N2N9 1353 aa17.54■□□□□ 0.4
SCNN1A-201ENST00000228916 GAS2L3Q86XJ1 694 aa17.54■□□□□ 0.4
SCNN1A-201ENST00000228916 GBP4Q96PP9 640 aa17.54■□□□□ 0.4
SCNN1A-201ENST00000228916 PLEKHF1Q96S99 279 aa17.54■□□□□ 0.4
SCNN1A-201ENST00000228916 ABCC11Q96J66 1382 aa17.54■□□□□ 0.4
SCNN1A-201ENST00000228916 TMEM57Q8N5G2 664 aa17.54■□□□□ 0.4
SCNN1A-201ENST00000228916 IL16Q14005 1332 aa17.53■□□□□ 0.4
SCNN1A-201ENST00000228916 HSP90AA2PQ14568 343 aaPredicted RBP17.53■□□□□ 0.4
SCNN1A-201ENST00000228916 SKOR2Q2VWA4 1001 aaPredicted RBP17.53■□□□□ 0.4
SCNN1A-201ENST00000228916 NOB1Q9ULX3 412 aaKnown RBP17.53■□□□□ 0.4
SCNN1A-201ENST00000228916 TRIM35Q9UPQ4 493 aa17.53■□□□□ 0.4
SCNN1A-201ENST00000228916 TULP4Q9NRJ4 1543 aa17.53■□□□□ 0.4
SCNN1A-201ENST00000228916 PTMSP20962 102 aa17.52■□□□□ 0.4
SCNN1A-201ENST00000228916 TMPOP42166 694 aaKnown RBP17.52■□□□□ 0.4
SCNN1A-201ENST00000228916 NUTM2DQ5VT03 806 aaPredicted RBP17.52■□□□□ 0.4
SCNN1A-201ENST00000228916 GLI2P10070 1586 aa17.52■□□□□ 0.39
SCNN1A-201ENST00000228916 KIF2CQ99661 725 aa17.52■□□□□ 0.39
SCNN1A-201ENST00000228916 GGT6Q6P531 493 aa17.51■□□□□ 0.39
SCNN1A-201ENST00000228916 ASXL2Q76L83 1435 aa17.51■□□□□ 0.39
SCNN1A-201ENST00000228916 BMP2KLQ5H9B9 411 aa17.51■□□□□ 0.39
SCNN1A-201ENST00000228916 ARHGEF28Q8N1W1 1705 aaKnown RBP17.51■□□□□ 0.39
SCNN1A-201ENST00000228916 CFAP74Q9C0B2 1584 aa17.51■□□□□ 0.39
SCNN1A-201ENST00000228916 COL3A1P02461 1466 aaPredicted RBP17.5■□□□□ 0.39
SCNN1A-201ENST00000228916 HSP90AB1P08238 724 aaKnown RBP17.5■□□□□ 0.39
SCNN1A-201ENST00000228916 KIF16BQ96L93 1317 aa17.5■□□□□ 0.39
SCNN1A-201ENST00000228916 FRMPD1Q5SYB0 1578 aa17.5■□□□□ 0.39
SCNN1A-201ENST00000228916 TRIM44Q96DX7 344 aaPredicted RBP17.5■□□□□ 0.39
SCNN1A-201ENST00000228916 CHD1LQ86WJ1 897 aa17.5■□□□□ 0.39
SCNN1A-201ENST00000228916 CABP2Q9NPB3 220 aa17.5■□□□□ 0.39
SCNN1A-201ENST00000228916 LNPKQ9C0E8 428 aa17.49■□□□□ 0.39
SCNN1A-201ENST00000228916 EVC2Q86UK5 1308 aa17.49■□□□□ 0.39
SCNN1A-201ENST00000228916 IPO8O15397 1037 aaKnown RBP17.48■□□□□ 0.39
SCNN1A-201ENST00000228916 RPGRIP1LQ68CZ1 1315 aa17.47■□□□□ 0.39
SCNN1A-201ENST00000228916 MED14O60244 1454 aa17.47■□□□□ 0.39
SCNN1A-201ENST00000228916 CLEC17AQ6ZS10 378 aa17.47■□□□□ 0.39
SCNN1A-201ENST00000228916 SIGLEC1Q9BZZ2 1709 aa17.46■□□□□ 0.39
SCNN1A-201ENST00000228916 SAFB2Q14151 953 aaKnown RBP eCLIP17.46■□□□□ 0.39
SCNN1A-201ENST00000228916 HECW2Q9P2P5 1572 aa17.46■□□□□ 0.39
SCNN1A-201ENST00000228916 CD2BP2O95400 341 aaKnown RBP17.46■□□□□ 0.39
SCNN1A-201ENST00000228916 ALDH1L2Q3SY69 923 aa17.46■□□□□ 0.39
SCNN1A-201ENST00000228916 K7ELQ4 463 aaPredicted RBP17.45■□□□□ 0.38
SCNN1A-201ENST00000228916 PPP1R9BQ96SB3 815 aa17.45■□□□□ 0.38
SCNN1A-201ENST00000228916 A0A1W2PP64 1363 aa17.45■□□□□ 0.38
SCNN1A-201ENST00000228916 IBTKQ9P2D0 1353 aaPredicted RBP17.45■□□□□ 0.38
SCNN1A-201ENST00000228916 CAMSAP1Q5T5Y3 1602 aa17.45■□□□□ 0.38
SCNN1A-201ENST00000228916 U2SURPO15042 1029 aaKnown RBP17.45■□□□□ 0.38
SCNN1A-201ENST00000228916 TPM2P07951 284 aa17.44■□□□□ 0.38
SCNN1A-201ENST00000228916 ABCC3O15438 1527 aa17.44■□□□□ 0.38
SCNN1A-201ENST00000228916 BRPF1P55201 1214 aaPredicted RBP17.44■□□□□ 0.38
SCNN1A-201ENST00000228916 CCDC173Q0VFZ6 552 aa17.44■□□□□ 0.38
SCNN1A-201ENST00000228916 NEXMIFQ5QGS0 1516 aa17.43■□□□□ 0.38
SCNN1A-201ENST00000228916 GGNBP2Q9H3C7 697 aa17.43■□□□□ 0.38
SCNN1A-201ENST00000228916 ARHGAP31Q2M1Z3 1444 aa17.43■□□□□ 0.38
SCNN1A-201ENST00000228916 GCC1Q96CN9 775 aa17.43■□□□□ 0.38
SCNN1A-201ENST00000228916 PKNOX2Q96KN3 472 aa17.43■□□□□ 0.38
SCNN1A-201ENST00000228916 PPIP5K1Q6PFW1 1433 aa17.42■□□□□ 0.38
SCNN1A-201ENST00000228916 RIPK4P57078 832 aa17.42■□□□□ 0.38
SCNN1A-201ENST00000228916 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
SCNN1A-201ENST00000228916 POGZQ7Z3K3 1410 aa17.42■□□□□ 0.38
SCNN1A-201ENST00000228916 TBC1D9Q6ZT07 1266 aa17.41■□□□□ 0.38
SCNN1A-201ENST00000228916 VSIG10Q8N0Z9 540 aa17.41■□□□□ 0.38
SCNN1A-201ENST00000228916 PIK3C2BO00750 1634 aa17.41■□□□□ 0.38
SCNN1A-201ENST00000228916 REREQ9P2R6 1566 aa17.41■□□□□ 0.38
SCNN1A-201ENST00000228916 VGFO15240 615 aaPredicted RBP17.41■□□□□ 0.38
SCNN1A-201ENST00000228916 KLHL40Q2TBA0 621 aa17.41■□□□□ 0.38
SCNN1A-201ENST00000228916 ZNF428Q96B54 188 aa17.41■□□□□ 0.38
SCNN1A-201ENST00000228916 MLH3Q9UHC1 1453 aa17.4■□□□□ 0.38
SCNN1A-201ENST00000228916 ZBTB7BO15156 539 aaPredicted RBP17.4■□□□□ 0.38
SCNN1A-201ENST00000228916 SSFA2P28290 1259 aa17.4■□□□□ 0.38
SCNN1A-201ENST00000228916 GAS2L2Q8NHY3 880 aa17.4■□□□□ 0.38
SCNN1A-201ENST00000228916 PIK3R4Q99570 1358 aa17.4■□□□□ 0.38
SCNN1A-201ENST00000228916 ANKRD26Q9UPS8 1709 aa17.4■□□□□ 0.38
SCNN1A-201ENST00000228916 ANKRD45Q5TZF3 282 aa17.4■□□□□ 0.38
SCNN1A-201ENST00000228916 GOLGA6L22H0YM25 854 aa17.39■□□□□ 0.37
SCNN1A-201ENST00000228916 NASPP49321 788 aaPredicted RBP17.39■□□□□ 0.37
SCNN1A-201ENST00000228916 ZMYND15Q9H091 742 aa17.39■□□□□ 0.37
SCNN1A-201ENST00000228916 RBM42Q9BTD8 480 aaKnown RBP17.39■□□□□ 0.37
SCNN1A-201ENST00000228916 FOXD4L1Q9NU39 408 aa17.39■□□□□ 0.37
SCNN1A-201ENST00000228916 SRPK2P78362 688 aaKnown RBP17.38■□□□□ 0.37
SCNN1A-201ENST00000228916 ZSCAN30Q86W11 494 aa17.38■□□□□ 0.37
SCNN1A-201ENST00000228916 STK26Q9P289 416 aa17.38■□□□□ 0.37
SCNN1A-201ENST00000228916 FYB1O15117 783 aa17.38■□□□□ 0.37
SCNN1A-201ENST00000228916 BAG4O95429 457 aaKnown RBP17.38■□□□□ 0.37
SCNN1A-201ENST00000228916 CHMP4BQ9H444 224 aaKnown RBP17.38■□□□□ 0.37
SCNN1A-201ENST00000228916 PNPLA6Q8IY17 1366 aa17.38■□□□□ 0.37
SCNN1A-201ENST00000228916 PTCH1Q13635 1447 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms