RNA–Protein interactions for RNA: ENST00000217381.2

SNTA1-201, Transcript of syntrophin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTA1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTA1-201ENST00000217381 ARHGEF40Q8TER5 1519 aa31.04■■■□□ 2.56
SNTA1-201ENST00000217381 PCDHB15Q9Y5E8 787 aa31.03■■■□□ 2.56
SNTA1-201ENST00000217381 AGLP35573 1532 aa31.03■■■□□ 2.56
SNTA1-201ENST00000217381 USP19O94966 1318 aa31.02■■■□□ 2.56
SNTA1-201ENST00000217381 PLEKHF1Q96S99 279 aa31.02■■■□□ 2.56
SNTA1-201ENST00000217381 FYB1O15117 783 aa31.01■■■□□ 2.55
SNTA1-201ENST00000217381 NFKBIBQ15653 356 aa31■■■□□ 2.55
SNTA1-201ENST00000217381 POGKQ9P215 609 aa31■■■□□ 2.55
SNTA1-201ENST00000217381 SETD1AO15047 1707 aaKnown RBP31■■■□□ 2.55
SNTA1-201ENST00000217381 TERF2IPQ9NYB0 399 aa30.99■■■□□ 2.55
SNTA1-201ENST00000217381 KIF20BQ96Q89 1820 aa30.98■■■□□ 2.55
SNTA1-201ENST00000217381 SPATA31D1Q6ZQQ2 1576 aa30.97■■■□□ 2.55
SNTA1-201ENST00000217381 CT47B1P0C2W7 299 aaPredicted RBP30.97■■■□□ 2.55
SNTA1-201ENST00000217381 A2ML1A8K2U0 1454 aa30.97■■■□□ 2.55
SNTA1-201ENST00000217381 ZMYM3Q14202 1370 aa30.96■■■□□ 2.55
SNTA1-201ENST00000217381 U2SURPO15042 1029 aaKnown RBP30.95■■■□□ 2.55
SNTA1-201ENST00000217381 DLC1Q96QB1 1528 aa30.95■■■□□ 2.54
SNTA1-201ENST00000217381 TMPOP42166 694 aaKnown RBP30.95■■■□□ 2.54
SNTA1-201ENST00000217381 MVPQ14764 893 aaKnown RBP30.95■■■□□ 2.54
SNTA1-201ENST00000217381 CDK19Q9BWU1 502 aa30.95■■■□□ 2.54
SNTA1-201ENST00000217381 SEC24BO95487 1268 aa30.94■■■□□ 2.54
SNTA1-201ENST00000217381 TSR2Q969E8 191 aaKnown RBP30.94■■■□□ 2.54
SNTA1-201ENST00000217381 TRIM35Q9UPQ4 493 aa30.93■■■□□ 2.54
SNTA1-201ENST00000217381 ZKSCAN2Q63HK3 967 aa30.93■■■□□ 2.54
SNTA1-201ENST00000217381 PPP6R1Q9UPN7 881 aa30.91■■■□□ 2.54
SNTA1-201ENST00000217381 PDZRN3Q9UPQ7 1066 aa30.91■■■□□ 2.54
SNTA1-201ENST00000217381 RWDD1Q9H446 243 aaPredicted RBP30.91■■■□□ 2.54
SNTA1-201ENST00000217381 PNPLA6Q8IY17 1366 aa30.91■■■□□ 2.54
SNTA1-201ENST00000217381 STAG3Q9UJ98 1225 aa30.9■■■□□ 2.54
SNTA1-201ENST00000217381 EXOSC9Q06265 439 aaKnown RBP30.89■■■□□ 2.54
SNTA1-201ENST00000217381 DZIP1LQ8IYY4 767 aaKnown RBP30.89■■■□□ 2.54
SNTA1-201ENST00000217381 CABP1Q9NZU7 370 aa30.89■■■□□ 2.54
SNTA1-201ENST00000217381 RIMS2Q9UQ26 1411 aa30.88■■■□□ 2.53
SNTA1-201ENST00000217381 HDGFL2Q7Z4V5 671 aaPredicted RBP30.88■■■□□ 2.53
SNTA1-201ENST00000217381 IL16Q14005 1332 aa30.88■■■□□ 2.53
SNTA1-201ENST00000217381 TRHP20396 242 aaPredicted RBP30.87■■■□□ 2.53
SNTA1-201ENST00000217381 FTSJ3Q8IY81 847 aaKnown RBP30.87■■■□□ 2.53
SNTA1-201ENST00000217381 NRXN3Q9Y4C0 1643 aa30.86■■■□□ 2.53
SNTA1-201ENST00000217381 CDC42BPGQ6DT37 1551 aa30.86■■■□□ 2.53
SNTA1-201ENST00000217381 SMC4Q9NTJ3 1288 aa30.86■■■□□ 2.53
SNTA1-201ENST00000217381 ATP7BP35670 1465 aa30.84■■■□□ 2.53
SNTA1-201ENST00000217381 DIAPH1O60610 1272 aaKnown RBP30.84■■■□□ 2.53
SNTA1-201ENST00000217381 WAPLQ7Z5K2 1190 aa30.84■■■□□ 2.53
SNTA1-201ENST00000217381 TRIM27P14373 513 aa30.82■■■□□ 2.53
SNTA1-201ENST00000217381 SSH1Q8WYL5 1049 aa30.82■■■□□ 2.53
SNTA1-201ENST00000217381 RIPK4P57078 832 aa30.8■■■□□ 2.52
SNTA1-201ENST00000217381 GSE1Q14687 1217 aa30.8■■■□□ 2.52
SNTA1-201ENST00000217381 LRRC7Q96NW7 1537 aa30.8■■■□□ 2.52
SNTA1-201ENST00000217381 ATF7IPQ6VMQ6 1270 aa30.78■■■□□ 2.52
SNTA1-201ENST00000217381 PNNQ9H307 717 aaKnown RBP30.78■■■□□ 2.52
SNTA1-201ENST00000217381 FRAT2O75474 233 aaPredicted RBP30.76■■■□□ 2.51
SNTA1-201ENST00000217381 DDX19BQ9UMR2 479 aa30.76■■■□□ 2.51
SNTA1-201ENST00000217381 BECN1Q14457 450 aa30.75■■■□□ 2.51
SNTA1-201ENST00000217381 TBC1D32Q96NH3 1257 aa30.75■■■□□ 2.51
SNTA1-201ENST00000217381 HDAC1Q13547 482 aaPredicted RBP30.74■■■□□ 2.51
SNTA1-201ENST00000217381 MLECQ14165 292 aa30.74■■■□□ 2.51
SNTA1-201ENST00000217381 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.74■■■□□ 2.51
SNTA1-201ENST00000217381 UPF2Q9HAU5 1272 aaKnown RBP30.74■■■□□ 2.51
SNTA1-201ENST00000217381 NOB1Q9ULX3 412 aaKnown RBP30.74■■■□□ 2.51
SNTA1-201ENST00000217381 FCHSD2O94868 740 aa30.73■■■□□ 2.51
SNTA1-201ENST00000217381 ITPRIPQ8IWB1 547 aa30.73■■■□□ 2.51
SNTA1-201ENST00000217381 POLKQ9UBT6 870 aa30.73■■■□□ 2.51
SNTA1-201ENST00000217381 CPSF1Q10570 1443 aaKnown RBP30.73■■■□□ 2.51
SNTA1-201ENST00000217381 FAM135BQ49AJ0 1406 aa30.73■■■□□ 2.51
SNTA1-201ENST00000217381 MAP2P11137 1827 aaKnown RBP30.73■■■□□ 2.51
SNTA1-201ENST00000217381 FBLN1P23142 703 aa30.73■■■□□ 2.51
SNTA1-201ENST00000217381 METP08581 1390 aa30.72■■■□□ 2.51
SNTA1-201ENST00000217381 KNDC1Q76NI1 1749 aa30.7■■■□□ 2.51
SNTA1-201ENST00000217381 RSPH6AQ9H0K4 717 aa30.7■■■□□ 2.5
SNTA1-201ENST00000217381 KIF16BQ96L93 1317 aa30.7■■■□□ 2.5
SNTA1-201ENST00000217381 TMEM57Q8N5G2 664 aa30.68■■■□□ 2.5
SNTA1-201ENST00000217381 EDC4Q6P2E9 1401 aaKnown RBP30.68■■■□□ 2.5
SNTA1-201ENST00000217381 PPIP5K1Q6PFW1 1433 aa30.68■■■□□ 2.5
SNTA1-201ENST00000217381 WASLO00401 505 aaPredicted RBP30.67■■■□□ 2.5
SNTA1-201ENST00000217381 ALDH1L2Q3SY69 923 aa30.67■■■□□ 2.5
SNTA1-201ENST00000217381 PRKAR2BP31323 418 aa30.66■■■□□ 2.5
SNTA1-201ENST00000217381 ZBTB40Q9NUA8 1239 aa30.65■■■□□ 2.5
SNTA1-201ENST00000217381 MON2Q7Z3U7 1717 aa30.65■■■□□ 2.5
SNTA1-201ENST00000217381 IPO8O15397 1037 aaKnown RBP30.64■■■□□ 2.5
SNTA1-201ENST00000217381 SMC5Q8IY18 1101 aa30.64■■■□□ 2.5
SNTA1-201ENST00000217381 IL27Q8NEV9 243 aa30.64■■■□□ 2.5
SNTA1-201ENST00000217381 TECPR2O15040 1411 aa30.63■■■□□ 2.49
SNTA1-201ENST00000217381 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.62■■■□□ 2.49
SNTA1-201ENST00000217381 CPS1P31327 1500 aa30.61■■■□□ 2.49
SNTA1-201ENST00000217381 CDK12Q9NYV4 1490 aaPredicted RBP30.61■■■□□ 2.49
SNTA1-201ENST00000217381 NME9Q86XW9 330 aa30.61■■■□□ 2.49
SNTA1-201ENST00000217381 EMILIN1Q9Y6C2 1016 aa30.61■■■□□ 2.49
SNTA1-201ENST00000217381 TXNDC2Q86VQ3 553 aa30.6■■■□□ 2.49
SNTA1-201ENST00000217381 ANTXR1Q9H6X2 564 aa30.6■■■□□ 2.49
SNTA1-201ENST00000217381 AKAP12Q02952 1782 aa30.6■■■□□ 2.49
SNTA1-201ENST00000217381 BRPF1P55201 1214 aaPredicted RBP30.59■■■□□ 2.49
SNTA1-201ENST00000217381 TBC1D2Q9BYX2 928 aa30.59■■■□□ 2.49
SNTA1-201ENST00000217381 ZNF428Q96B54 188 aa30.59■■■□□ 2.49
SNTA1-201ENST00000217381 PHACTR3Q96KR7 559 aa30.59■■■□□ 2.49
SNTA1-201ENST00000217381 SLKQ9H2G2 1235 aaPredicted RBP30.59■■■□□ 2.49
SNTA1-201ENST00000217381 ZRANB1Q9UGI0 708 aa30.59■■■□□ 2.49
SNTA1-201ENST00000217381 NFE2L2Q16236 605 aa30.58■■■□□ 2.49
SNTA1-201ENST00000217381 C3P01024 1663 aa30.58■■■□□ 2.49
SNTA1-201ENST00000217381 AATKQ6ZMQ8 1374 aa30.57■■■□□ 2.48
SNTA1-201ENST00000217381 NCKAP5LQ9HCH0 1330 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms