RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Pcmtd1P59913 357 aa16.33■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Cgnl1Q6AW69 1298 aa16.33■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 4933402E13RikQ9D4D2 429 aa16.33■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Mast1Q9R1L5 1570 aa16.32■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Gli2Q0VGT2 1544 aa16.32■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Gm10563F6WIE4 79 aa16.32■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 CastP51125 788 aa16.32■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Znf518aB2RRF6 1478 aaKnown RBP16.32■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Ipo4Q8VI75 1082 aa16.32■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Ppp1r3fQ9JIG4 799 aa16.32■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Rrbp1Q99PL5 1605 aaKnown RBP16.32■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Cul7Q8VE73 1689 aa16.31■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Hmox1P14901 289 aa16.31■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Gm16486A0A1D5RMD1 1434 aa16.31■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 HypkQ9CR41 129 aa16.31■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Fchsd2Q3USJ8 740 aa16.31■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Smarca5Q91ZW3 1051 aaKnown RBP16.3■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Prrc2bQ7TPM1 1486 aaKnown RBP16.3■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Casc1Q6TDU8 730 aa16.3■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Q8BT18 775 aa16.3■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Erich6bQ9D4S6 220 aa16.3■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Sbno1Q689Z5 1390 aa16.3■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Ppp1r15aP17564 657 aa16.3■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Map3k13Q1HKZ5 959 aa16.3■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Atf7ipQ7TT18 1306 aa16.3■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 InsrP15208 1372 aa16.3■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Dot1lQ6XZL8 1540 aa16.29■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Nol12Q8BG17 217 aa16.29■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Chmp7Q8R1T1 451 aa16.29■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Tfip11Q9ERA6 838 aaKnown RBP16.29■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Zranb3Q6NZP1 1069 aa16.28■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 CatipB9EKE5 520 aa16.28■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 CgnP59242 1191 aa16.28■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Mphosph10Q810V0 681 aaKnown RBP16.28■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Aldh1l1Q8R0Y6 902 aa16.28■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Rsph3aQ3UFY4 516 aa16.27■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Stk3Q9JI10 497 aa16.27■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Usp54Q8BL06 1588 aaKnown RBP16.27■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 AppP12023 770 aa16.27■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 HdgfP51859 237 aaKnown RBP16.27■□□□□ 0.2
Pdgfra-205ENSMUST00000201711 Cwc27Q3TKY6 469 aa16.27■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Tmem132eQ6IEE6 982 aa16.26■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Pknox2Q8BG99 474 aa16.26■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Cetn4Q8K4K1 168 aa16.26■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Q4VA45 678 aa16.26■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Pdcl3Q8BVF2 240 aa16.26■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 CarsQ9ER72 831 aaKnown RBP16.26■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 MvpQ9EQK5 861 aa16.26■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Fhod3Q76LL6 1578 aa16.26■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Cyp46a1Q9WVK8 500 aa16.25■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 PtprtQ99M80 1454 aa16.25■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Idi2Q8BFZ6 227 aa16.25■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Rab11fip3Q8CHD8 1047 aa16.25■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Lrrc7Q80TE7 1490 aa16.25■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Rlbp1Q9Z275 317 aa16.24■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Dnmt1P13864 1620 aaKnown RBP16.24■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Iffo2Q8R2V2 512 aa16.24■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Exoc6bA6H5Z3 810 aa16.24■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Mbd5B1AYB6 1498 aa16.24■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 AampJ3QN89 436 aa16.24■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 GnpatP98192 678 aa16.24■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 PalldQ9ET54 1408 aa16.23■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Neurod6P48986 337 aa16.23■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Gsdma3Q5Y4Y6 464 aa16.23■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Lmod3E9QA62 571 aa16.23■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Sptbn5F6UCX4 1208 aa16.23■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Srgap3Q812A2 1099 aa16.23■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Casq1O09165 405 aa16.23■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Tceal9Q9DD24 104 aa16.23■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Ppip5k1A2ARP1 1436 aa16.23■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Prkar2bP31324 416 aa16.22■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Nphp4P59240 1425 aa16.22■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Tmem94Q7TSH8 1360 aa16.22■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 AU019823E9PUQ3 292 aa16.21■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Ubap1lG3UW59 384 aa16.21■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Prim1P20664 417 aa16.21■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Kif1bQ60575 1816 aaKnown RBP16.21■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 CrebrfQ8CDG5 640 aaKnown RBP16.21■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Atf3Q60765 181 aa16.21■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 GphnQ8BUV3 769 aaKnown RBP16.21■□□□□ 0.19
Pdgfra-205ENSMUST00000201711 Lamc1P02468 1607 aaKnown RBP16.21■□□□□ 0.18
Pdgfra-205ENSMUST00000201711 Gnai2P08752 355 aaKnown RBP16.2■□□□□ 0.18
Pdgfra-205ENSMUST00000201711 Tulp4Q9JIL5 1547 aa16.2■□□□□ 0.18
Pdgfra-205ENSMUST00000201711 Snap23O09044 210 aa16.2■□□□□ 0.18
Pdgfra-205ENSMUST00000201711 Filip1lQ6P6L0 1131 aa16.2■□□□□ 0.18
Pdgfra-205ENSMUST00000201711 Tex14Q7M6U3 1450 aa16.2■□□□□ 0.18
Pdgfra-205ENSMUST00000201711 Pnmal2G3X9N3 661 aa16.19■□□□□ 0.18
Pdgfra-205ENSMUST00000201711 Nol10Q5RJG1 687 aaKnown RBP16.19■□□□□ 0.18
Pdgfra-205ENSMUST00000201711 Kiaa1107Q80TK0 1369 aa16.19■□□□□ 0.18
Pdgfra-205ENSMUST00000201711 Eif4a2P10630 407 aa16.19■□□□□ 0.18
Pdgfra-205ENSMUST00000201711 Nphp1Q9QY53 687 aa16.19■□□□□ 0.18
Pdgfra-205ENSMUST00000201711 Map3k19E9Q3S4 1311 aa16.19■□□□□ 0.18
Pdgfra-205ENSMUST00000201711 Rsph6aQ8CDR2 708 aa16.19■□□□□ 0.18
Pdgfra-205ENSMUST00000201711 Setbp1Q9Z180 1582 aa16.19■□□□□ 0.18
Pdgfra-205ENSMUST00000201711 Cfap65Q3V0B4 1847 aa16.18■□□□□ 0.18
Pdgfra-205ENSMUST00000201711 Pola1P33609 1465 aa16.18■□□□□ 0.18
Pdgfra-205ENSMUST00000201711 Fam50bQ9WTJ8 334 aa16.18■□□□□ 0.18
Pdgfra-205ENSMUST00000201711 P2rx7Q9Z1M0 595 aa16.18■□□□□ 0.18
Pdgfra-205ENSMUST00000201711 Kdm5cP41230 1554 aa16.18■□□□□ 0.18
Pdgfra-205ENSMUST00000201711 Gm21698A0A087WQP8 267 aa16.18■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 93 ms