RNA–Protein interactions for RNA: ENSMUST00000190193.7

Col6a5-203, Transcript of Collagen alpha-5(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a5, Length 9,289 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-203ENSMUST00000190193 Cfap58B2RW38 873 aa11.92□□□□□ -0.5
Col6a5-203ENSMUST00000190193 Ppp4r3bQ922R5 820 aa11.92□□□□□ -0.5
Col6a5-203ENSMUST00000190193 Kif1bQ60575 1816 aaKnown RBP11.92□□□□□ -0.5
Col6a5-203ENSMUST00000190193 Gcc2Q8CHG3 1679 aa11.91□□□□□ -0.5
Col6a5-203ENSMUST00000190193 Ssh1Q76I79 1042 aa11.91□□□□□ -0.5
Col6a5-203ENSMUST00000190193 CenpqQ9CPQ5 267 aa11.91□□□□□ -0.5
Col6a5-203ENSMUST00000190193 Ccdc96Q9CR92 584 aa11.91□□□□□ -0.5
Col6a5-203ENSMUST00000190193 ImpactO55091 318 aa11.91□□□□□ -0.5
Col6a5-203ENSMUST00000190193 Slu7Q8BHJ9 585 aa11.91□□□□□ -0.5
Col6a5-203ENSMUST00000190193 BbxQ8VBW5 907 aa11.91□□□□□ -0.5
Col6a5-203ENSMUST00000190193 ItpripQ3TNL8 555 aa11.91□□□□□ -0.5
Col6a5-203ENSMUST00000190193 Krt85Q9Z2T6 507 aa11.91□□□□□ -0.5
Col6a5-203ENSMUST00000190193 Erlin1Q91X78 346 aa11.91□□□□□ -0.5
Col6a5-203ENSMUST00000190193 Eif4g1Q6NZJ6 1600 aaKnown RBP11.91□□□□□ -0.5
Col6a5-203ENSMUST00000190193 Kdm5aQ3UXZ9 1690 aa11.91□□□□□ -0.5
Col6a5-203ENSMUST00000190193 Wdr33Q8K4P0 1330 aaKnown RBP11.9□□□□□ -0.5
Col6a5-203ENSMUST00000190193 Ccp110Q7TSH4 1004 aa11.9□□□□□ -0.5
Col6a5-203ENSMUST00000190193 Ccdc181Q80ZU5 509 aa11.9□□□□□ -0.5
Col6a5-203ENSMUST00000190193 Swt1Q9DBQ9 907 aa11.9□□□□□ -0.5
Col6a5-203ENSMUST00000190193 Me1P06801 572 aa11.9□□□□□ -0.5
Col6a5-203ENSMUST00000190193 Gsdma3Q5Y4Y6 464 aa11.9□□□□□ -0.5
Col6a5-203ENSMUST00000190193 Gse1Q3U3C9 1213 aa11.9□□□□□ -0.5
Col6a5-203ENSMUST00000190193 Usp16Q99LG0 825 aa11.9□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Sv2bQ8BG39 683 aa11.9□□□□□ -0.51
Col6a5-203ENSMUST00000190193 IncenpQ9WU62 880 aa11.9□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Txndc2Q6P902 515 aa11.89□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Q9D9S1 216 aa11.89□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Rsph6aQ8CDR2 708 aa11.88□□□□□ -0.51
Col6a5-203ENSMUST00000190193 NrkQ9R0G8 1455 aa11.88□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Rbm25B2RY56 838 aaKnown RBP11.88□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Syce3B5KM66 88 aa11.88□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Hvcn1Q3U2S8 269 aa11.88□□□□□ -0.51
Col6a5-203ENSMUST00000190193 CrcpO35427 148 aa11.88□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Ercc6lQ8BHK9 1240 aa11.88□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Senp3Q9EP97 568 aaKnown RBP11.88□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Usp40Q8BWR4 1235 aa11.87□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Anapc15-psA0A140T8L6 141 aa11.87□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Cep57l1Q8VDS7 400 aa11.87□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Cdkl5Q3UTQ8 938 aa11.87□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Kif18aQ91WD7 886 aa11.87□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Naip1Q9QWK5 1403 aa11.87□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Phldb1Q6PDH0 1371 aaKnown RBP11.87□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Cc2d1aQ8K1A6 943 aa11.87□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Paf1Q8K2T8 535 aa11.87□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Ccar2Q8VDP4 922 aaKnown RBP11.87□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Stk38Q91VJ4 465 aa11.87□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Cavin4A2AMM0 362 aa11.87□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Ccdc141E9Q8Q6 1531 aa11.87□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Arap1Q4LDD4 1452 aa11.86□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Kif3bQ61771 747 aa11.86□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Gtf3c5Q8R2T8 520 aa11.86□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Gsto1O09131 240 aa11.86□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Ddx46Q569Z5 1032 aaKnown RBP11.86□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Dhx16G3X8X0 1044 aaKnown RBP11.86□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Abcd1P48410 736 aa11.86□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Smc1bQ920F6 1248 aa11.86□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Cnnm3Q32NY4 713 aa11.85□□□□□ -0.51
Col6a5-203ENSMUST00000190193 MyclP10166 368 aa11.85□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Gm42641I6L9G2 585 aa11.85□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Ccdc191J3QQ27 883 aa11.85□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Neurod6P48986 337 aa11.85□□□□□ -0.51
Col6a5-203ENSMUST00000190193 AtripQ8BMG1 785 aa11.85□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Nup88Q8CEC0 753 aaKnown RBP11.85□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Crocc2F6XLV1 1638 aa11.85□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Gnai2P08752 355 aaKnown RBP11.84□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Maats1Q8BRC6 783 aa11.84□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Lrrc45Q8CIM1 670 aa11.84□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Chmp7Q8R1T1 451 aa11.84□□□□□ -0.51
Col6a5-203ENSMUST00000190193 FosbP13346 338 aa11.84□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Sox12Q04890 314 aa11.84□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Rhot2Q8JZN7 620 aa11.84□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Paip2Q9D6V8 124 aa11.84□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Ppp6r1Q7TSI3 856 aa11.84□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Nol12Q8BG17 217 aa11.84□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Paxbp1P58501 919 aa11.83□□□□□ -0.51
Col6a5-203ENSMUST00000190193 Gnl2Q99LH1 728 aaKnown RBP11.83□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Trim30cD3YVI9 513 aa11.83□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Lamb3Q61087 1168 aa11.83□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Atad2bE9Q166 1460 aaKnown RBP11.83□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Sass6Q80UK7 654 aa11.83□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Rnf187Q8BFX1 236 aa11.83□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Utp14aQ640M1 767 aaKnown RBP11.83□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Plekhg5Q66T02 1073 aa11.83□□□□□ -0.52
Col6a5-203ENSMUST00000190193 TxlnaQ6PAM1 554 aaKnown RBP11.83□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Q8C5K5 320 aa11.83□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Ddx19aQ61655 478 aaKnown RBP11.83□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Cabp4Q8VHC5 271 aa11.83□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Fam107bQ3TGF2 131 aa11.83□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Lrrfip1Q3UZ39 729 aaKnown RBP11.82□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Ctr9Q62018 1173 aaKnown RBP11.82□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Cfap45Q9D9U9 551 aa11.82□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Cbx1P83917 185 aaKnown RBP11.82□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Rcan3Q9JKK0 239 aa11.82□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Acbd3Q8BMP6 525 aa11.82□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Erc1Q99MI1 1120 aa11.82□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Mcm4P49717 862 aa11.82□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Mctp1E9PV86 951 aa11.82□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Hs1bp3Q3TC93 395 aa11.82□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Odf2lQ9D478 642 aa11.82□□□□□ -0.52
Col6a5-203ENSMUST00000190193 Clul1Q3ZRW6 464 aa11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms