RNA–Protein interactions for RNA: ENSMUST00000161003.1

Ctdp1-203, Transcript of RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

TSL 1 (best) BASIC

Gene Ctdp1, Length 1,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1-203ENSMUST00000161003 Usp40Q8BWR4 1235 aa13.88□□□□□ -0.19
Ctdp1-203ENSMUST00000161003 RalgapbQ8BQZ4 1484 aa13.87□□□□□ -0.19
Ctdp1-203ENSMUST00000161003 Marf1Q8BJ34 1730 aaKnown RBP13.87□□□□□ -0.19
Ctdp1-203ENSMUST00000161003 Lrp6O88572 1613 aa13.87□□□□□ -0.19
Ctdp1-203ENSMUST00000161003 Idi1P58044 227 aa13.87□□□□□ -0.19
Ctdp1-203ENSMUST00000161003 Siglec1Q62230 1695 aa13.87□□□□□ -0.19
Ctdp1-203ENSMUST00000161003 Tmem2Q5FWI3 1383 aa13.86□□□□□ -0.19
Ctdp1-203ENSMUST00000161003 NgefQ8CHT1 710 aa13.86□□□□□ -0.19
Ctdp1-203ENSMUST00000161003 MypopQ8R4U1 393 aa13.86□□□□□ -0.19
Ctdp1-203ENSMUST00000161003 Polr3aB2RXC6 1390 aa13.85□□□□□ -0.19
Ctdp1-203ENSMUST00000161003 Abcc10Q8R4P9 1501 aa13.85□□□□□ -0.19
Ctdp1-203ENSMUST00000161003 Camta1A2A891 1682 aa13.84□□□□□ -0.19
Ctdp1-203ENSMUST00000161003 Smim5Q8BT42 78 aa13.83□□□□□ -0.2
Ctdp1-203ENSMUST00000161003 Zbtb4Q5F293 982 aa13.82□□□□□ -0.2
Ctdp1-203ENSMUST00000161003 Znf316Q6PGE4 1016 aa13.82□□□□□ -0.2
Ctdp1-203ENSMUST00000161003 Ap3b2Q9JME5 1082 aa13.82□□□□□ -0.2
Ctdp1-203ENSMUST00000161003 Nphp4P59240 1425 aa13.81□□□□□ -0.2
Ctdp1-203ENSMUST00000161003 Mug2P28666 1451 aa13.81□□□□□ -0.2
Ctdp1-203ENSMUST00000161003 Cpsf1Q9EPU4 1441 aaKnown RBP13.81□□□□□ -0.2
Ctdp1-203ENSMUST00000161003 Tnrc6bQ8BKI2 1810 aaKnown RBP13.8□□□□□ -0.2
Ctdp1-203ENSMUST00000161003 Gtf2e1Q9D0D5 440 aa13.8□□□□□ -0.2
Ctdp1-203ENSMUST00000161003 Atp7bQ64446 1462 aa13.8□□□□□ -0.2
Ctdp1-203ENSMUST00000161003 Acsbg1Q99PU5 721 aa13.79□□□□□ -0.2
Ctdp1-203ENSMUST00000161003 Cdk19Q8BWD8 501 aa13.78□□□□□ -0.2
Ctdp1-203ENSMUST00000161003 Gm16486A0A1D5RMD1 1434 aa13.78□□□□□ -0.2
Ctdp1-203ENSMUST00000161003 Fam135bQ9DAI6 1403 aa13.78□□□□□ -0.2
Ctdp1-203ENSMUST00000161003 Wdr17E9Q271 1322 aa13.77□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 Tex14Q7M6U3 1450 aa13.77□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 Emilin2Q8K482 1074 aa13.77□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 Ddx54Q8K4L0 874 aaKnown RBP13.77□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 CenpjQ569L8 1344 aa13.76□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 Acin1Q9JIX8 1338 aaKnown RBP13.76□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 Mon2Q80TL7 1715 aa13.76□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 Atp10bB1AWN4 1474 aa13.75□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 Arhgef1Q61210 920 aaKnown RBP13.75□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 NktrP30415 1453 aa13.74□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 PtpruB1AUH1 1446 aa13.74□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 Zranb1Q7M760 708 aa13.74□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 Stard8Q8K031 1019 aa13.74□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 Sirt1Q923E4 737 aa13.74□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 Srcin1Q9QWI6 1250 aa13.74□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 Abca15E9PWH4 1668 aa13.74□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 NinlQ6ZQ12 1394 aa13.73□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 Sra1Q80VJ2 232 aa13.73□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 Nrxn1Q9CS84 1514 aa13.73□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 Fyb1O35601 819 aa13.72□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 Slc35g1Q8BY79 368 aa13.72□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 Lrrc59Q922Q8 307 aaKnown RBP13.72□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 Eno4Q8C042 619 aa13.71□□□□□ -0.21
Ctdp1-203ENSMUST00000161003 Rundc1Q0VDN7 615 aa13.7□□□□□ -0.22
Ctdp1-203ENSMUST00000161003 Dixdc1Q80Y83 711 aa13.7□□□□□ -0.22
Ctdp1-203ENSMUST00000161003 Gsto1O09131 240 aa13.69□□□□□ -0.22
Ctdp1-203ENSMUST00000161003 Rock2P70336 1388 aa13.69□□□□□ -0.22
Ctdp1-203ENSMUST00000161003 Card11Q8CIS0 1159 aa13.68□□□□□ -0.22
Ctdp1-203ENSMUST00000161003 Exosc9Q9JHI7 438 aaKnown RBP13.68□□□□□ -0.22
Ctdp1-203ENSMUST00000161003 Pola1P33609 1465 aa13.66□□□□□ -0.22
Ctdp1-203ENSMUST00000161003 FanciQ8K368 1330 aa13.65□□□□□ -0.22
Ctdp1-203ENSMUST00000161003 InhbeO08717 350 aa13.65□□□□□ -0.22
Ctdp1-203ENSMUST00000161003 Idi2Q8BFZ6 227 aa13.65□□□□□ -0.22
Ctdp1-203ENSMUST00000161003 TimelessQ9R1X4 1197 aa13.65□□□□□ -0.22
Ctdp1-203ENSMUST00000161003 Sbno1Q689Z5 1390 aa13.65□□□□□ -0.22
Ctdp1-203ENSMUST00000161003 PaskQ8CEE6 1383 aa13.65□□□□□ -0.22
Ctdp1-203ENSMUST00000161003 Cdhr2E9Q7P9 1308 aa13.64□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 Col16a1Q8BLX7 1580 aa13.64□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 Psrc1Q9D0P7 329 aa13.64□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 Map3k19E9Q3S4 1311 aa13.64□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 Tnrc6cQ3UHC0 1690 aaKnown RBP13.63□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 Tet3Q8BG87 1668 aa13.63□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 CatipB9EKE5 520 aa13.63□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 Dzip1Q8BMD2 852 aa13.63□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 Txnrd1Q9JMH6 613 aa13.63□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 Nfat5Q9WV30 1534 aa13.63□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 Frmpd2A0A140LI67 1392 aa13.62□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 Cnga1P29974 684 aa13.62□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 Rpgrip1Q9EPQ2 1331 aa13.62□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 InsrP15208 1372 aa13.61□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 SnphQ80U23 495 aa13.61□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 ZgpatQ8VDM1 511 aa13.61□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 Nid2O88322 1403 aa13.6□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 Sgsm1Q8BPQ7 1093 aa13.6□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 Zmym3Q9JLM4 1370 aa13.59□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 Sf3b2Q3UJB0 878 aaKnown RBP13.59□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 Rtl5Q5DTT4 599 aa13.59□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 Bcl9lQ67FY2 1494 aa13.59□□□□□ -0.23
Ctdp1-203ENSMUST00000161003 HdgfP51859 237 aaKnown RBP13.58□□□□□ -0.24
Ctdp1-203ENSMUST00000161003 Shank2Q80Z38 1476 aa13.58□□□□□ -0.24
Ctdp1-203ENSMUST00000161003 Repin1Q5U4E2 545 aa13.57□□□□□ -0.24
Ctdp1-203ENSMUST00000161003 Rgs17Q9QZB0 210 aa13.57□□□□□ -0.24
Ctdp1-203ENSMUST00000161003 Ltbp1Q8CG19 1712 aa13.56□□□□□ -0.24
Ctdp1-203ENSMUST00000161003 Gm21698A0A087WQP8 267 aa13.56□□□□□ -0.24
Ctdp1-203ENSMUST00000161003 Gm21671G3UY31 267 aa13.56□□□□□ -0.24
Ctdp1-203ENSMUST00000161003 Dok7Q18PE0 504 aa13.56□□□□□ -0.24
Ctdp1-203ENSMUST00000161003 Gimap6Q8K349 305 aa13.56□□□□□ -0.24
Ctdp1-203ENSMUST00000161003 Kif16bB1AVY7 1312 aa13.56□□□□□ -0.24
Ctdp1-203ENSMUST00000161003 TonslQ6NZL6 1363 aa13.56□□□□□ -0.24
Ctdp1-203ENSMUST00000161003 Znf335A2A5K6 1337 aa13.55□□□□□ -0.24
Ctdp1-203ENSMUST00000161003 Cacna1sQ02789 1880 aa13.54□□□□□ -0.24
Ctdp1-203ENSMUST00000161003 Col22a1E9Q7P1 1613 aa13.53□□□□□ -0.24
Ctdp1-203ENSMUST00000161003 Gm21190A0A0G2JGJ6 266 aa13.53□□□□□ -0.24
Ctdp1-203ENSMUST00000161003 Ncapd2Q8K2Z4 1392 aa13.51□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 175 ms