RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Usp32F8VPZ3 1604 aa30.92■■■□□ 2.54
Ubp1-203ENSMUST00000116492 Cavin4A2AMM0 362 aa30.92■■■□□ 2.54
Ubp1-203ENSMUST00000116492 PaskQ8CEE6 1383 aa30.91■■■□□ 2.54
Ubp1-203ENSMUST00000116492 Map3k19E9Q3S4 1311 aa30.9■■■□□ 2.54
Ubp1-203ENSMUST00000116492 NudcO35685 332 aaKnown RBP30.9■■■□□ 2.54
Ubp1-203ENSMUST00000116492 Polr3glQ8R0C0 218 aa30.9■■■□□ 2.54
Ubp1-203ENSMUST00000116492 Fchsd2Q3USJ8 740 aa30.89■■■□□ 2.54
Ubp1-203ENSMUST00000116492 Trim28Q62318 834 aa30.89■■■□□ 2.54
Ubp1-203ENSMUST00000116492 Duxf3A0A0N4SV92 674 aa30.88■■■□□ 2.53
Ubp1-203ENSMUST00000116492 ChgaP26339 463 aaKnown RBP30.86■■■□□ 2.53
Ubp1-203ENSMUST00000116492 Nkx1-2P42580 305 aa30.85■■■□□ 2.53
Ubp1-203ENSMUST00000116492 Ttc21aQ8C0S4 1314 aa30.84■■■□□ 2.53
Ubp1-203ENSMUST00000116492 Slc12a5Q91V14 1138 aa30.83■■■□□ 2.53
Ubp1-203ENSMUST00000116492 Psme1P97371 249 aa30.83■■■□□ 2.53
Ubp1-203ENSMUST00000116492 Asxl2Q8BZ32 1370 aa30.81■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Gemin5Q8BX17 1502 aaKnown RBP30.81■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Trim26Q99PN3 545 aa30.81■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Ankrd50F7BE84 1390 aa30.81■■■□□ 2.52
Ubp1-203ENSMUST00000116492 CastP51125 788 aa30.8■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Rlbp1Q9Z275 317 aa30.8■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Txndc2Q6P902 515 aa30.78■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Ppp1r15aP17564 657 aa30.77■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Q4VA45 678 aa30.77■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Idi2Q8BFZ6 227 aa30.77■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Swt1Q9DBQ9 907 aa30.77■■■□□ 2.52
Ubp1-203ENSMUST00000116492 PalmQ9Z0P4 383 aa30.77■■■□□ 2.52
Ubp1-203ENSMUST00000116492 Tmc1Q8R4P5 757 aa30.76■■■□□ 2.52
Ubp1-203ENSMUST00000116492 CanxP35564 591 aaKnown RBP30.76■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Ppm1gQ61074 542 aa30.76■■■□□ 2.51
Ubp1-203ENSMUST00000116492 PtpruB1AUH1 1446 aa30.76■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Atp7bQ64446 1462 aa30.76■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Cps1Q8C196 1500 aa30.76■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Kif1aP33173 1695 aa30.75■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Ccdc171E9Q1U1 1324 aa30.75■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Iqcf3Q9D498 203 aa30.75■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Ipo8Q7TMY7 1010 aa30.73■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Rbm25B2RY56 838 aaKnown RBP30.73■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Pik3r4Q8VD65 1358 aa30.72■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Trim30dE9PWL0 497 aa30.71■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Chd2E9PZM4 1827 aaKnown RBP30.71■■■□□ 2.51
Ubp1-203ENSMUST00000116492 DiexfQ8BTT6 772 aaKnown RBP30.71■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Dnai1Q8C0M8 701 aa30.71■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Atl3Q91YH5 541 aa30.7■■■□□ 2.51
Ubp1-203ENSMUST00000116492 Ccdc183A2AJB1 534 aa30.68■■■□□ 2.5
Ubp1-203ENSMUST00000116492 Birc3O08863 600 aa30.68■■■□□ 2.5
Ubp1-203ENSMUST00000116492 Ak7Q9D2H2 614 aa30.68■■■□□ 2.5
Ubp1-203ENSMUST00000116492 Slit3Q9WVB4 1523 aa30.67■■■□□ 2.5
Ubp1-203ENSMUST00000116492 Hoxb7P09024 217 aa30.67■■■□□ 2.5
Ubp1-203ENSMUST00000116492 Ccdc60Q8C4J0 545 aa30.65■■■□□ 2.5
Ubp1-203ENSMUST00000116492 Hs1bp3Q3TC93 395 aa30.64■■■□□ 2.5
Ubp1-203ENSMUST00000116492 Bcl11aQ9QYE3 773 aa30.64■■■□□ 2.5
Ubp1-203ENSMUST00000116492 Ppp2r3aB2RXC8 1150 aa30.64■■■□□ 2.49
Ubp1-203ENSMUST00000116492 CatipB9EKE5 520 aa30.64■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Spef2Q8C9J3 1734 aa30.63■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Znf316Q6PGE4 1016 aa30.62■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Pik3c2bE9QAN8 1632 aa30.62■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Dip2bQ3UH60 1574 aa30.62■■■□□ 2.49
Ubp1-203ENSMUST00000116492 IghaA0A0A6YXW6 389 aa30.62■■■□□ 2.49
Ubp1-203ENSMUST00000116492 G3bp1P97855 465 aaKnown RBP30.62■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Ppp1r3fQ9JIG4 799 aa30.62■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Tnrc6bQ8BKI2 1810 aaKnown RBP30.62■■■□□ 2.49
Ubp1-203ENSMUST00000116492 4930567H17RikQ3V0K5 233 aa30.61■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Uhrf1bp1lA2RSJ4 1457 aa30.61■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Sirt1Q923E4 737 aa30.6■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Adamtsl3G3UXC7 1706 aa30.6■■■□□ 2.49
Ubp1-203ENSMUST00000116492 PzpQ61838 1495 aa30.59■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Armcx1Q9CX83 456 aa30.58■■■□□ 2.49
Ubp1-203ENSMUST00000116492 Rsph6aQ8CDR2 708 aa30.57■■■□□ 2.48
Ubp1-203ENSMUST00000116492 Hsp90ab1P11499 724 aaKnown RBP30.56■■■□□ 2.48
Ubp1-203ENSMUST00000116492 Mre11Q61216 706 aa30.56■■■□□ 2.48
Ubp1-203ENSMUST00000116492 Maco1Q7TQE6 664 aaKnown RBP30.56■■■□□ 2.48
Ubp1-203ENSMUST00000116492 Cdc37l1Q9CZP7 335 aa30.55■■■□□ 2.48
Ubp1-203ENSMUST00000116492 Sart3Q9JLI8 962 aaKnown RBP30.55■■■□□ 2.48
Ubp1-203ENSMUST00000116492 Gnai1B2RSH2 354 aa30.54■■■□□ 2.48
Ubp1-203ENSMUST00000116492 Gnai3Q9DC51 354 aa30.54■■■□□ 2.48
Ubp1-203ENSMUST00000116492 HnrnpmQ9D0E1 729 aaKnown RBP30.52■■■□□ 2.48
Ubp1-203ENSMUST00000116492 Hsp90aa1P07901 733 aaKnown RBP30.52■■■□□ 2.48
Ubp1-203ENSMUST00000116492 Chd4Q6PDQ2 1915 aaKnown RBP30.51■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Znf335A2A5K6 1337 aa30.51■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Mdc1Q5PSV9 1707 aa30.51■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Astn2Q80Z10 1352 aa30.51■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Arap3Q8R5G7 1538 aa30.5■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Eif2s2Q99L45 331 aaKnown RBP30.5■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Vamp4O70480 141 aa30.49■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Plekhm2Q80TQ5 1018 aa30.49■■■□□ 2.47
Ubp1-203ENSMUST00000116492 KarsQ99MN1 595 aaKnown RBP30.49■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Phlpp2Q8BXA7 1320 aa30.48■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Gm6268A2A3U9 297 aa30.47■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Ppp1r9bQ6R891 817 aaKnown RBP30.47■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Aldh1l1Q8R0Y6 902 aa30.47■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Cluap1Q8R3P7 413 aa30.47■■■□□ 2.47
Ubp1-203ENSMUST00000116492 N4bp2F8VQG7 1678 aaKnown RBP30.46■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Znf330Q922H9 316 aa30.46■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Dnajc5gQ8C632 165 aa30.45■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Sos1Q62245 1319 aa30.45■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Nsd3Q6P2L6 1439 aa30.45■■■□□ 2.47
Ubp1-203ENSMUST00000116492 Q3UJC8 639 aa30.44■■■□□ 2.46
Ubp1-203ENSMUST00000116492 Q3UPC7 1272 aa30.44■■■□□ 2.46
Ubp1-203ENSMUST00000116492 Ccdc9Q8VC31 543 aaKnown RBP30.44■■■□□ 2.46
Ubp1-203ENSMUST00000116492 Cabp2Q9JLK4 216 aa30.43■■■□□ 2.46
Retrieved 100 of 22,080 RNA–protein pairs in 40.8 ms