RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Tcerg1Q8CGF7 1100 aaKnown RBP20.8■□□□□ 0.92
Trim39-203ENSMUST00000113706 CatipB9EKE5 520 aa20.78■□□□□ 0.92
Trim39-203ENSMUST00000113706 Alpk3Q924C5 1678 aa20.78■□□□□ 0.92
Trim39-203ENSMUST00000113706 Apaf1O88879 1249 aa20.77■□□□□ 0.92
Trim39-203ENSMUST00000113706 Sirt1Q923E4 737 aa20.77■□□□□ 0.92
Trim39-203ENSMUST00000113706 Chd4Q6PDQ2 1915 aaKnown RBP20.77■□□□□ 0.92
Trim39-203ENSMUST00000113706 C5P06684 1680 aa20.76■□□□□ 0.91
Trim39-203ENSMUST00000113706 TnikP83510 1323 aa20.75■□□□□ 0.91
Trim39-203ENSMUST00000113706 Trim28Q62318 834 aa20.75■□□□□ 0.91
Trim39-203ENSMUST00000113706 Als2Q920R0 1651 aa20.74■□□□□ 0.91
Trim39-203ENSMUST00000113706 Birc3O08863 600 aa20.74■□□□□ 0.91
Trim39-203ENSMUST00000113706 Prkrip1Q9CWV6 186 aaKnown RBP20.74■□□□□ 0.91
Trim39-203ENSMUST00000113706 Abcc10Q8R4P9 1501 aa20.73■□□□□ 0.91
Trim39-203ENSMUST00000113706 MlecQ6ZQI3 291 aaKnown RBP20.73■□□□□ 0.91
Trim39-203ENSMUST00000113706 Atxn3Q9CVD2 355 aa20.73■□□□□ 0.91
Trim39-203ENSMUST00000113706 Gas2l2Q5SSG4 860 aa20.72■□□□□ 0.91
Trim39-203ENSMUST00000113706 Pak3Q61036 559 aa20.72■□□□□ 0.91
Trim39-203ENSMUST00000113706 Slc12a5Q91V14 1138 aa20.72■□□□□ 0.91
Trim39-203ENSMUST00000113706 DiexfQ8BTT6 772 aaKnown RBP20.7■□□□□ 0.9
Trim39-203ENSMUST00000113706 Myt1Q8CFC2 1127 aa20.7■□□□□ 0.9
Trim39-203ENSMUST00000113706 Rwdd1Q9CQK7 243 aa20.7■□□□□ 0.9
Trim39-203ENSMUST00000113706 Mon2Q80TL7 1715 aa20.69■□□□□ 0.9
Trim39-203ENSMUST00000113706 Rimbp3Q3V0F0 1606 aa20.68■□□□□ 0.9
Trim39-203ENSMUST00000113706 NgefQ8CHT1 710 aa20.68■□□□□ 0.9
Trim39-203ENSMUST00000113706 Uhrf1bp1lA2RSJ4 1457 aa20.68■□□□□ 0.9
Trim39-203ENSMUST00000113706 NeflP08551 543 aa20.67■□□□□ 0.9
Trim39-203ENSMUST00000113706 Znf541Q0GGX2 1363 aa20.67■□□□□ 0.9
Trim39-203ENSMUST00000113706 Ppp1r15aP17564 657 aa20.66■□□□□ 0.9
Trim39-203ENSMUST00000113706 Ncbp3Q8BZR9 615 aaKnown RBP20.66■□□□□ 0.9
Trim39-203ENSMUST00000113706 PalmQ9Z0P4 383 aa20.66■□□□□ 0.9
Trim39-203ENSMUST00000113706 Rims2Q9EQZ7 1530 aa20.66■□□□□ 0.9
Trim39-203ENSMUST00000113706 Mapk8ip3Q9ESN9 1337 aa20.66■□□□□ 0.9
Trim39-203ENSMUST00000113706 Egfem1Q8C088 590 aa20.66■□□□□ 0.9
Trim39-203ENSMUST00000113706 Astn2Q80Z10 1352 aa20.66■□□□□ 0.9
Trim39-203ENSMUST00000113706 Znf335A2A5K6 1337 aa20.66■□□□□ 0.9
Trim39-203ENSMUST00000113706 Idi1P58044 227 aa20.66■□□□□ 0.9
Trim39-203ENSMUST00000113706 Gm10563F6WIE4 79 aa20.65■□□□□ 0.9
Trim39-203ENSMUST00000113706 Pik3c2aQ61194 1686 aa20.65■□□□□ 0.9
Trim39-203ENSMUST00000113706 Dusp27Q148W8 1138 aa20.65■□□□□ 0.9
Trim39-203ENSMUST00000113706 Tmem94Q7TSH8 1360 aa20.65■□□□□ 0.9
Trim39-203ENSMUST00000113706 Thsd7aQ69ZU6 1645 aa20.64■□□□□ 0.9
Trim39-203ENSMUST00000113706 NalcnQ8BXR5 1738 aa20.64■□□□□ 0.89
Trim39-203ENSMUST00000113706 Sox12Q04890 314 aa20.64■□□□□ 0.89
Trim39-203ENSMUST00000113706 Hoxb7P09024 217 aa20.64■□□□□ 0.89
Trim39-203ENSMUST00000113706 Apbb1Q9QXJ1 710 aa20.64■□□□□ 0.89
Trim39-203ENSMUST00000113706 Med1Q925J9 1575 aa20.63■□□□□ 0.89
Trim39-203ENSMUST00000113706 C3P01027 1663 aa20.63■□□□□ 0.89
Trim39-203ENSMUST00000113706 Uhrf1bp1B2KF50 1429 aa20.62■□□□□ 0.89
Trim39-203ENSMUST00000113706 Mdc1Q5PSV9 1707 aa20.61■□□□□ 0.89
Trim39-203ENSMUST00000113706 Spef2Q8C9J3 1734 aa20.61■□□□□ 0.89
Trim39-203ENSMUST00000113706 Cavin4A2AMM0 362 aa20.61■□□□□ 0.89
Trim39-203ENSMUST00000113706 Fchsd2Q3USJ8 740 aa20.61■□□□□ 0.89
Trim39-203ENSMUST00000113706 Ubr1O70481 1757 aa20.6■□□□□ 0.89
Trim39-203ENSMUST00000113706 Mbd3Q9Z2D8 285 aaKnown RBP20.6■□□□□ 0.89
Trim39-203ENSMUST00000113706 Q4VA45 678 aa20.6■□□□□ 0.89
Trim39-203ENSMUST00000113706 Col16a1Q8BLX7 1580 aa20.59■□□□□ 0.89
Trim39-203ENSMUST00000113706 Rsph6aQ8CDR2 708 aa20.59■□□□□ 0.89
Trim39-203ENSMUST00000113706 Col14a1Q80X19 1797 aa20.59■□□□□ 0.89
Trim39-203ENSMUST00000113706 Ciz1Q8VEH2 845 aa20.59■□□□□ 0.89
Trim39-203ENSMUST00000113706 CemipQ8BI06 1361 aa20.58■□□□□ 0.89
Trim39-203ENSMUST00000113706 Tns3Q5SSZ5 1440 aa20.58■□□□□ 0.89
Trim39-203ENSMUST00000113706 Cdk12Q14AX6 1484 aaKnown RBP20.58■□□□□ 0.88
Trim39-203ENSMUST00000113706 PaskQ8CEE6 1383 aa20.57■□□□□ 0.88
Trim39-203ENSMUST00000113706 Map2P20357 1828 aa20.57■□□□□ 0.88
Trim39-203ENSMUST00000113706 Phlpp1Q8CHE4 1687 aa20.57■□□□□ 0.88
Trim39-203ENSMUST00000113706 Ksr2Q3UVC0 959 aa20.57■□□□□ 0.88
Trim39-203ENSMUST00000113706 Ecm2Q5FW85 670 aa20.57■□□□□ 0.88
Trim39-203ENSMUST00000113706 Kdm2bQ6P1G2 1309 aa20.57■□□□□ 0.88
Trim39-203ENSMUST00000113706 Scn7aB1AYL1 1681 aa20.56■□□□□ 0.88
Trim39-203ENSMUST00000113706 Ap3b2Q9JME5 1082 aa20.56■□□□□ 0.88
Trim39-203ENSMUST00000113706 Fam135bQ9DAI6 1403 aa20.54■□□□□ 0.88
Trim39-203ENSMUST00000113706 Sipa1l2Q80TE4 1722 aa20.54■□□□□ 0.88
Trim39-203ENSMUST00000113706 Unc13bQ9Z1N9 1602 aa20.53■□□□□ 0.88
Trim39-203ENSMUST00000113706 Atp7bQ64446 1462 aa20.53■□□□□ 0.88
Trim39-203ENSMUST00000113706 Frmpd2A0A140LI67 1392 aa20.52■□□□□ 0.88
Trim39-203ENSMUST00000113706 Nrxn3Q6P9K9 1571 aa20.52■□□□□ 0.88
Trim39-203ENSMUST00000113706 Camta1A2A891 1682 aa20.52■□□□□ 0.88
Trim39-203ENSMUST00000113706 Eif4a2P10630 407 aa20.51■□□□□ 0.87
Trim39-203ENSMUST00000113706 Rtl5Q5DTT4 599 aa20.51■□□□□ 0.87
Trim39-203ENSMUST00000113706 Swt1Q9DBQ9 907 aa20.51■□□□□ 0.87
Trim39-203ENSMUST00000113706 Ccar1Q8CH18 1146 aaKnown RBP20.51■□□□□ 0.87
Trim39-203ENSMUST00000113706 Polr3glQ8R0C0 218 aa20.51■□□□□ 0.87
Trim39-203ENSMUST00000113706 Ankrd50F7BE84 1390 aa20.51■□□□□ 0.87
Trim39-203ENSMUST00000113706 Ttc21aQ8C0S4 1314 aa20.51■□□□□ 0.87
Trim39-203ENSMUST00000113706 Mcm10Q0VBD2 885 aa20.5■□□□□ 0.87
Trim39-203ENSMUST00000113706 Trim26Q99PN3 545 aa20.5■□□□□ 0.87
Trim39-203ENSMUST00000113706 Dennd6aQ8BH65 605 aa20.49■□□□□ 0.87
Trim39-203ENSMUST00000113706 FancaQ9JL70 1439 aa20.49■□□□□ 0.87
Trim39-203ENSMUST00000113706 Nlgn1Q99K10 843 aa20.48■□□□□ 0.87
Trim39-203ENSMUST00000113706 Pank1Q8K4K6 548 aa20.47■□□□□ 0.87
Trim39-203ENSMUST00000113706 Parp14Q2EMV9 1817 aa20.47■□□□□ 0.87
Trim39-203ENSMUST00000113706 Ttll13A4Q9F6 804 aa20.47■□□□□ 0.87
Trim39-203ENSMUST00000113706 Gm21190A0A0G2JGJ6 266 aa20.46■□□□□ 0.87
Trim39-203ENSMUST00000113706 Slc35g1Q8BY79 368 aa20.46■□□□□ 0.87
Trim39-203ENSMUST00000113706 PtprvP70289 1705 aa20.46■□□□□ 0.87
Trim39-203ENSMUST00000113706 Tmem2Q5FWI3 1383 aa20.45■□□□□ 0.86
Trim39-203ENSMUST00000113706 Nckap5lQ6GQX2 1323 aa20.45■□□□□ 0.86
Trim39-203ENSMUST00000113706 CastP51125 788 aa20.45■□□□□ 0.86
Trim39-203ENSMUST00000113706 MpripP97434 1024 aa20.45■□□□□ 0.86
Trim39-203ENSMUST00000113706 Rbm25B2RY56 838 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms