RNA–Protein interactions for RNA: ENSMUST00000112519.8

Chfr-202, Transcript of E3 ubiquitin-protein ligase CHFR, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Chfr, Length 3,159 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chfr-202ENSMUST00000112519 Senp3Q9EP97 568 aaKnown RBP16.87■□□□□ 0.29
Chfr-202ENSMUST00000112519 Safb2Q80YR5 991 aaKnown RBP16.86■□□□□ 0.29
Chfr-202ENSMUST00000112519 Birc3O08863 600 aa16.86■□□□□ 0.29
Chfr-202ENSMUST00000112519 NudcO35685 332 aaKnown RBP16.86■□□□□ 0.29
Chfr-202ENSMUST00000112519 NktrP30415 1453 aa16.86■□□□□ 0.29
Chfr-202ENSMUST00000112519 Map3k19E9Q3S4 1311 aa16.86■□□□□ 0.29
Chfr-202ENSMUST00000112519 Hsp90ab1P11499 724 aaKnown RBP16.85■□□□□ 0.29
Chfr-202ENSMUST00000112519 Eif2s2Q99L45 331 aaKnown RBP16.85■□□□□ 0.29
Chfr-202ENSMUST00000112519 Dnai1Q8C0M8 701 aa16.85■□□□□ 0.29
Chfr-202ENSMUST00000112519 Iqsec2Q5DU25 1478 aa16.84■□□□□ 0.29
Chfr-202ENSMUST00000112519 Ksr2Q3UVC0 959 aa16.84■□□□□ 0.29
Chfr-202ENSMUST00000112519 HnrnpmQ9D0E1 729 aaKnown RBP16.83■□□□□ 0.29
Chfr-202ENSMUST00000112519 Dusp27Q148W8 1138 aa16.83■□□□□ 0.28
Chfr-202ENSMUST00000112519 Kdm2bQ6P1G2 1309 aa16.83■□□□□ 0.28
Chfr-202ENSMUST00000112519 Zc3h13E9Q784 1729 aaKnown RBP16.82■□□□□ 0.28
Chfr-202ENSMUST00000112519 Cluap1Q8R3P7 413 aa16.82■□□□□ 0.28
Chfr-202ENSMUST00000112519 Slc12a5Q91V14 1138 aa16.82■□□□□ 0.28
Chfr-202ENSMUST00000112519 Ak7Q9D2H2 614 aa16.82■□□□□ 0.28
Chfr-202ENSMUST00000112519 Med14A2ABV5 1459 aaKnown RBP16.8■□□□□ 0.28
Chfr-202ENSMUST00000112519 TnikP83510 1323 aa16.8■□□□□ 0.28
Chfr-202ENSMUST00000112519 Adgrl1Q80TR1 1466 aa16.8■□□□□ 0.28
Chfr-202ENSMUST00000112519 Nwd1A6H603 1563 aa16.8■□□□□ 0.28
Chfr-202ENSMUST00000112519 Znf330Q922H9 316 aa16.8■□□□□ 0.28
Chfr-202ENSMUST00000112519 FanciQ8K368 1330 aa16.79■□□□□ 0.28
Chfr-202ENSMUST00000112519 NgefQ8CHT1 710 aa16.79■□□□□ 0.28
Chfr-202ENSMUST00000112519 PplQ9R269 1755 aa16.79■□□□□ 0.28
Chfr-202ENSMUST00000112519 Nkx1-2P42580 305 aa16.79■□□□□ 0.28
Chfr-202ENSMUST00000112519 Plekhg1F6S200 1446 aa16.78■□□□□ 0.28
Chfr-202ENSMUST00000112519 Smc5Q8CG46 1101 aaKnown RBP16.78■□□□□ 0.28
Chfr-202ENSMUST00000112519 PalmQ9Z0P4 383 aa16.78■□□□□ 0.28
Chfr-202ENSMUST00000112519 Plin1Q8CGN5 517 aa16.78■□□□□ 0.28
Chfr-202ENSMUST00000112519 Ppp1r3fQ9JIG4 799 aa16.78■□□□□ 0.28
Chfr-202ENSMUST00000112519 Adamtsl3G3UXC7 1706 aa16.77■□□□□ 0.28
Chfr-202ENSMUST00000112519 Mapk8ip3Q9ESN9 1337 aa16.76■□□□□ 0.27
Chfr-202ENSMUST00000112519 Dip2aQ8BWT5 1523 aa16.76■□□□□ 0.27
Chfr-202ENSMUST00000112519 Ppm1gQ61074 542 aa16.75■□□□□ 0.27
Chfr-202ENSMUST00000112519 Ipo8Q7TMY7 1010 aa16.75■□□□□ 0.27
Chfr-202ENSMUST00000112519 Gm6268A2A3U9 297 aa16.74■□□□□ 0.27
Chfr-202ENSMUST00000112519 Mcm10Q0VBD2 885 aa16.74■□□□□ 0.27
Chfr-202ENSMUST00000112519 KarsQ99MN1 595 aaKnown RBP16.74■□□□□ 0.27
Chfr-202ENSMUST00000112519 Plcd4Q8K3R3 807 aa16.73■□□□□ 0.27
Chfr-202ENSMUST00000112519 Chd2E9PZM4 1827 aaKnown RBP16.72■□□□□ 0.27
Chfr-202ENSMUST00000112519 Sox12Q04890 314 aa16.72■□□□□ 0.27
Chfr-202ENSMUST00000112519 Rlbp1Q9Z275 317 aa16.72■□□□□ 0.27
Chfr-202ENSMUST00000112519 Trim58Q5NCC9 485 aa16.71■□□□□ 0.27
Chfr-202ENSMUST00000112519 Spryd3E9Q9B3 442 aa16.71■□□□□ 0.27
Chfr-202ENSMUST00000112519 Uhrf1bp1lA2RSJ4 1457 aa16.71■□□□□ 0.27
Chfr-202ENSMUST00000112519 Ccdc183A2AJB1 534 aa16.71■□□□□ 0.26
Chfr-202ENSMUST00000112519 Gtf3c3Q3TMP1 882 aa16.71■□□□□ 0.26
Chfr-202ENSMUST00000112519 Trim28Q62318 834 aa16.7■□□□□ 0.26
Chfr-202ENSMUST00000112519 Idi2Q8BFZ6 227 aa16.7■□□□□ 0.26
Chfr-202ENSMUST00000112519 Chd4Q6PDQ2 1915 aaKnown RBP16.7■□□□□ 0.26
Chfr-202ENSMUST00000112519 Duxf3A0A0N4SV92 674 aa16.7■□□□□ 0.26
Chfr-202ENSMUST00000112519 Q4VA45 678 aa16.7■□□□□ 0.26
Chfr-202ENSMUST00000112519 Usp32F8VPZ3 1604 aa16.7■□□□□ 0.26
Chfr-202ENSMUST00000112519 Pik3c2bE9QAN8 1632 aa16.69■□□□□ 0.26
Chfr-202ENSMUST00000112519 Cavin4A2AMM0 362 aa16.69■□□□□ 0.26
Chfr-202ENSMUST00000112519 Nutm1Q8BHP2 1126 aa16.69■□□□□ 0.26
Chfr-202ENSMUST00000112519 Ccar1Q8CH18 1146 aaKnown RBP16.69■□□□□ 0.26
Chfr-202ENSMUST00000112519 Dip2bQ3UH60 1574 aa16.68■□□□□ 0.26
Chfr-202ENSMUST00000112519 MyclP10166 368 aa16.67■□□□□ 0.26
Chfr-202ENSMUST00000112519 Q3UJC8 639 aa16.67■□□□□ 0.26
Chfr-202ENSMUST00000112519 Rbm25B2RY56 838 aaKnown RBP16.66■□□□□ 0.26
Chfr-202ENSMUST00000112519 Pnmal2G3X9N3 661 aa16.66■□□□□ 0.26
Chfr-202ENSMUST00000112519 Ccdc60Q8C4J0 545 aa16.66■□□□□ 0.26
Chfr-202ENSMUST00000112519 CastP51125 788 aa16.65■□□□□ 0.26
Chfr-202ENSMUST00000112519 Nectin2P32507 530 aa16.65■□□□□ 0.26
Chfr-202ENSMUST00000112519 Cabp2Q9JLK4 216 aa16.65■□□□□ 0.26
Chfr-202ENSMUST00000112519 Znf521Q6KAS7 1311 aa16.65■□□□□ 0.26
Chfr-202ENSMUST00000112519 Tmco5bQ80X59 307 aa16.65■□□□□ 0.26
Chfr-202ENSMUST00000112519 Irx3P81067 507 aa16.64■□□□□ 0.25
Chfr-202ENSMUST00000112519 Pik3r4Q8VD65 1358 aa16.63■□□□□ 0.25
Chfr-202ENSMUST00000112519 CatipB9EKE5 520 aa16.63■□□□□ 0.25
Chfr-202ENSMUST00000112519 PtpruB1AUH1 1446 aa16.63■□□□□ 0.25
Chfr-202ENSMUST00000112519 PzpQ61838 1495 aa16.63■□□□□ 0.25
Chfr-202ENSMUST00000112519 Ppp1r15aP17564 657 aa16.63■□□□□ 0.25
Chfr-202ENSMUST00000112519 Mre11Q61216 706 aa16.63■□□□□ 0.25
Chfr-202ENSMUST00000112519 Ankrd50F7BE84 1390 aa16.63■□□□□ 0.25
Chfr-202ENSMUST00000112519 Slit3Q9WVB4 1523 aa16.63■□□□□ 0.25
Chfr-202ENSMUST00000112519 MpripP97434 1024 aa16.63■□□□□ 0.25
Chfr-202ENSMUST00000112519 Swt1Q9DBQ9 907 aa16.63■□□□□ 0.25
Chfr-202ENSMUST00000112519 Mfap1aC0HKD8 439 aaKnown RBP16.62■□□□□ 0.25
Chfr-202ENSMUST00000112519 Mfap1bC0HKD9 439 aaKnown RBP16.62■□□□□ 0.25
Chfr-202ENSMUST00000112519 Rsph6aQ8CDR2 708 aa16.62■□□□□ 0.25
Chfr-202ENSMUST00000112519 Tnrc6bQ8BKI2 1810 aaKnown RBP16.61■□□□□ 0.25
Chfr-202ENSMUST00000112519 Cps1Q8C196 1500 aa16.61■□□□□ 0.25
Chfr-202ENSMUST00000112519 Ttc21aQ8C0S4 1314 aa16.61■□□□□ 0.25
Chfr-202ENSMUST00000112519 Pcdh10E9PXQ7 1057 aa16.61■□□□□ 0.25
Chfr-202ENSMUST00000112519 Idi1P58044 227 aa16.61■□□□□ 0.25
Chfr-202ENSMUST00000112519 Gemin5Q8BX17 1502 aaKnown RBP16.6■□□□□ 0.25
Chfr-202ENSMUST00000112519 Klhdc4Q921I2 584 aa16.6■□□□□ 0.25
Chfr-202ENSMUST00000112519 Fchsd2Q3USJ8 740 aa16.59■□□□□ 0.25
Chfr-202ENSMUST00000112519 Fam135bQ9DAI6 1403 aa16.58■□□□□ 0.25
Chfr-202ENSMUST00000112519 Ccdc9Q8VC31 543 aaKnown RBP16.58■□□□□ 0.24
Chfr-202ENSMUST00000112519 Eif4a2P10630 407 aa16.58■□□□□ 0.24
Chfr-202ENSMUST00000112519 U2surpQ6NV83 1029 aaKnown RBP16.58■□□□□ 0.24
Chfr-202ENSMUST00000112519 Cdc37l1Q9CZP7 335 aa16.58■□□□□ 0.24
Chfr-202ENSMUST00000112519 4930407I10RikD3Z5T8 1512 aa16.58■□□□□ 0.24
Chfr-202ENSMUST00000112519 Maco1Q7TQE6 664 aaKnown RBP16.57■□□□□ 0.24
Chfr-202ENSMUST00000112519 Nckap5lQ6GQX2 1323 aa16.57■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms