RNA–Protein interactions for RNA: ENSMUST00000110416.2

Usp8-202, Transcript of Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp8, Length 4,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8-202ENSMUST00000110416 RbsnQ80Y56 783 aa9.58□□□□□ -0.88
Usp8-202ENSMUST00000110416 Xrn1P97789 1719 aaKnown RBP9.58□□□□□ -0.88
Usp8-202ENSMUST00000110416 Rbm25B2RY56 838 aaKnown RBP9.57□□□□□ -0.88
Usp8-202ENSMUST00000110416 Bag4Q8CI61 457 aa9.57□□□□□ -0.88
Usp8-202ENSMUST00000110416 Fan1Q69ZT1 1020 aa9.57□□□□□ -0.88
Usp8-202ENSMUST00000110416 Itsn2Q9Z0R6 1659 aa9.57□□□□□ -0.88
Usp8-202ENSMUST00000110416 Rnf214Q8BFU3 668 aaKnown RBP9.57□□□□□ -0.88
Usp8-202ENSMUST00000110416 Irx2P81066 474 aa9.56□□□□□ -0.88
Usp8-202ENSMUST00000110416 Klhdc4Q921I2 584 aa9.56□□□□□ -0.88
Usp8-202ENSMUST00000110416 Mbd3Q9Z2D8 285 aaKnown RBP9.56□□□□□ -0.88
Usp8-202ENSMUST00000110416 Sipa1l1Q8C0T5 1782 aa9.56□□□□□ -0.88
Usp8-202ENSMUST00000110416 Kiaa0556Q8C753 1610 aa9.56□□□□□ -0.88
Usp8-202ENSMUST00000110416 Erich6D3Z6S9 713 aa9.56□□□□□ -0.88
Usp8-202ENSMUST00000110416 Smarca5Q91ZW3 1051 aaKnown RBP9.56□□□□□ -0.88
Usp8-202ENSMUST00000110416 Abcc6Q9R1S7 1498 aa9.55□□□□□ -0.88
Usp8-202ENSMUST00000110416 KdrP35918 1367 aa9.55□□□□□ -0.88
Usp8-202ENSMUST00000110416 Ttc37F8VPK0 1563 aa9.55□□□□□ -0.88
Usp8-202ENSMUST00000110416 Zfyve16Q80U44 1528 aa9.54□□□□□ -0.88
Usp8-202ENSMUST00000110416 AU022751B1B0V2 589 aa9.54□□□□□ -0.88
Usp8-202ENSMUST00000110416 Pde4cQ3UEI1 686 aa9.54□□□□□ -0.88
Usp8-202ENSMUST00000110416 Stac3Q8BZ71 360 aa9.54□□□□□ -0.88
Usp8-202ENSMUST00000110416 Sart1Q9Z315 806 aaKnown RBP9.54□□□□□ -0.88
Usp8-202ENSMUST00000110416 Fam135bQ9DAI6 1403 aa9.54□□□□□ -0.88
Usp8-202ENSMUST00000110416 Usp54Q8BL06 1588 aaKnown RBP9.54□□□□□ -0.88
Usp8-202ENSMUST00000110416 Gm10093D3YYI8 482 aa9.54□□□□□ -0.88
Usp8-202ENSMUST00000110416 Hdac1O09106 482 aaKnown RBP9.54□□□□□ -0.88
Usp8-202ENSMUST00000110416 Cpa2Q504N0 417 aa9.54□□□□□ -0.88
Usp8-202ENSMUST00000110416 Ylpm1Q9R0I7 1386 aaKnown RBP9.53□□□□□ -0.88
Usp8-202ENSMUST00000110416 Mcm10Q0VBD2 885 aa9.53□□□□□ -0.88
Usp8-202ENSMUST00000110416 Atp2b2Q9R0K7 1198 aa9.53□□□□□ -0.88
Usp8-202ENSMUST00000110416 Syce3B5KM66 88 aa9.53□□□□□ -0.88
Usp8-202ENSMUST00000110416 Ccdc146E9Q9F7 977 aa9.53□□□□□ -0.88
Usp8-202ENSMUST00000110416 FanclQ9CR14 375 aa9.53□□□□□ -0.88
Usp8-202ENSMUST00000110416 Erich6bQ9D4S6 220 aa9.53□□□□□ -0.88
Usp8-202ENSMUST00000110416 Nup160Q9Z0W3 1402 aaKnown RBP9.53□□□□□ -0.88
Usp8-202ENSMUST00000110416 CastP51125 788 aa9.53□□□□□ -0.88
Usp8-202ENSMUST00000110416 SrrtQ99MR6 875 aaKnown RBP9.53□□□□□ -0.88
Usp8-202ENSMUST00000110416 Nxf2Q4ZGD8 691 aa9.52□□□□□ -0.89
Usp8-202ENSMUST00000110416 Htatsf1Q8BGC0 757 aa9.52□□□□□ -0.89
Usp8-202ENSMUST00000110416 Cbx1P83917 185 aaKnown RBP9.52□□□□□ -0.89
Usp8-202ENSMUST00000110416 Usp40Q8BWR4 1235 aa9.52□□□□□ -0.89
Usp8-202ENSMUST00000110416 Chd1lQ9CXF7 900 aa9.52□□□□□ -0.89
Usp8-202ENSMUST00000110416 Spag9Q58A65 1321 aaKnown RBP9.52□□□□□ -0.89
Usp8-202ENSMUST00000110416 Abca8aQ8K442 1620 aa9.52□□□□□ -0.89
Usp8-202ENSMUST00000110416 Adgrl1Q80TR1 1466 aa9.52□□□□□ -0.89
Usp8-202ENSMUST00000110416 Nek4Q9Z1J2 792 aa9.52□□□□□ -0.89
Usp8-202ENSMUST00000110416 Wdr63B2RY71 923 aa9.51□□□□□ -0.89
Usp8-202ENSMUST00000110416 Samd1D3YXK1 519 aa9.51□□□□□ -0.89
Usp8-202ENSMUST00000110416 Prdm2A2A7B5 1709 aaKnown RBP9.51□□□□□ -0.89
Usp8-202ENSMUST00000110416 Kcnf1Q7TSH7 493 aa9.51□□□□□ -0.89
Usp8-202ENSMUST00000110416 Med14A2ABV5 1459 aaKnown RBP9.51□□□□□ -0.89
Usp8-202ENSMUST00000110416 Knl1Q66JQ7 1612 aa9.51□□□□□ -0.89
Usp8-202ENSMUST00000110416 Kansl3A2RSY1 903 aaKnown RBP9.5□□□□□ -0.89
Usp8-202ENSMUST00000110416 Talpid3E9PV87 1520 aa9.5□□□□□ -0.89
Usp8-202ENSMUST00000110416 Hecw2Q6I6G8 1578 aa9.5□□□□□ -0.89
Usp8-202ENSMUST00000110416 Uggt2E9Q4X2 1504 aa9.5□□□□□ -0.89
Usp8-202ENSMUST00000110416 Nol12Q8BG17 217 aa9.5□□□□□ -0.89
Usp8-202ENSMUST00000110416 Tmem132aQ922P8 1018 aa9.5□□□□□ -0.89
Usp8-202ENSMUST00000110416 Naip7Q9JIB3 1402 aa9.5□□□□□ -0.89
Usp8-202ENSMUST00000110416 Neo1P97798 1493 aa9.49□□□□□ -0.89
Usp8-202ENSMUST00000110416 Lmod3E9QA62 571 aa9.49□□□□□ -0.89
Usp8-202ENSMUST00000110416 Mindy4Q3UQI9 744 aa9.49□□□□□ -0.89
Usp8-202ENSMUST00000110416 Tshz3Q8CGV9 1081 aa9.49□□□□□ -0.89
Usp8-202ENSMUST00000110416 Trpm1Q2TV84 1622 aa9.49□□□□□ -0.89
Usp8-202ENSMUST00000110416 Fndc1E9Q043 1732 aa9.49□□□□□ -0.89
Usp8-202ENSMUST00000110416 DroshaQ5HZJ0 1373 aaKnown RBP9.49□□□□□ -0.89
Usp8-202ENSMUST00000110416 AatkQ80YE4 1365 aa9.49□□□□□ -0.89
Usp8-202ENSMUST00000110416 Zpr1Q62384 459 aa9.49□□□□□ -0.89
Usp8-202ENSMUST00000110416 Fam43aQ8BUP8 424 aa9.49□□□□□ -0.89
Usp8-202ENSMUST00000110416 Kidins220E9Q9B7 1793 aa9.49□□□□□ -0.89
Usp8-202ENSMUST00000110416 Gprasp1Q5U4C1 1347 aa9.49□□□□□ -0.89
Usp8-202ENSMUST00000110416 Nlrp6Q91WS2 869 aa9.49□□□□□ -0.89
Usp8-202ENSMUST00000110416 Nsd3Q6P2L6 1439 aa9.48□□□□□ -0.89
Usp8-202ENSMUST00000110416 Tmem131lQ3U3D7 1597 aa9.48□□□□□ -0.89
Usp8-202ENSMUST00000110416 Q3UPC7 1272 aa9.48□□□□□ -0.89
Usp8-202ENSMUST00000110416 Rrp12Q6P5B0 1295 aaKnown RBP9.48□□□□□ -0.89
Usp8-202ENSMUST00000110416 Abca6Q8K441 1624 aa9.48□□□□□ -0.89
Usp8-202ENSMUST00000110416 Mast1Q9R1L5 1570 aa9.48□□□□□ -0.89
Usp8-202ENSMUST00000110416 Mum1Q6DID5 682 aa9.48□□□□□ -0.89
Usp8-202ENSMUST00000110416 Stk24Q99KH8 431 aa9.48□□□□□ -0.89
Usp8-202ENSMUST00000110416 4931400O07RikQ9D4M5 137 aa9.48□□□□□ -0.89
Usp8-202ENSMUST00000110416 Adgrl2Q8JZZ7 1487 aa9.48□□□□□ -0.89
Usp8-202ENSMUST00000110416 Ncbp1Q3UYV9 790 aaKnown RBP9.48□□□□□ -0.89
Usp8-202ENSMUST00000110416 Fam163aQ8CAA5 168 aa9.48□□□□□ -0.89
Usp8-202ENSMUST00000110416 Mlh3A0A1Y7VMP7 1443 aa9.48□□□□□ -0.89
Usp8-202ENSMUST00000110416 Fgd6Q69ZL1 1399 aa9.48□□□□□ -0.89
Usp8-202ENSMUST00000110416 Ppp6r3Q922D4 844 aa9.47□□□□□ -0.89
Usp8-202ENSMUST00000110416 InsrP15208 1372 aa9.47□□□□□ -0.89
Usp8-202ENSMUST00000110416 Myo5cE9Q1F5 1742 aa9.47□□□□□ -0.89
Usp8-202ENSMUST00000110416 EappQ5BU09 281 aa9.47□□□□□ -0.89
Usp8-202ENSMUST00000110416 Ppp1r18Q8BQ30 594 aa9.47□□□□□ -0.89
Usp8-202ENSMUST00000110416 Ptgs1P22437 602 aa9.47□□□□□ -0.89
Usp8-202ENSMUST00000110416 Gse1Q3U3C9 1213 aa9.47□□□□□ -0.89
Usp8-202ENSMUST00000110416 Ccdc60Q8C4J0 545 aa9.47□□□□□ -0.89
Usp8-202ENSMUST00000110416 Ino80Q6ZPV2 1559 aa9.47□□□□□ -0.89
Usp8-202ENSMUST00000110416 Abca17E9PX95 1733 aa9.46□□□□□ -0.89
Usp8-202ENSMUST00000110416 Lcmt1A0A0U1RNF2 332 aa9.46□□□□□ -0.89
Usp8-202ENSMUST00000110416 Bms1Q6PGF5 1284 aaKnown RBP9.46□□□□□ -0.89
Usp8-202ENSMUST00000110416 Prdm4Q80V63 803 aa9.46□□□□□ -0.89
Usp8-202ENSMUST00000110416 Cyp27a1Q9DBG1 533 aa9.46□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms