RNA–Protein interactions for RNA: ENSMUST00000110416.2

Usp8-202, Transcript of Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp8, Length 4,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8-202ENSMUST00000110416 NischQ80TM9 1593 aa13.55□□□□□ -0.24
Usp8-202ENSMUST00000110416 Ehmt2Q9Z148 1263 aaKnown RBP13.31□□□□□ -0.28
Usp8-202ENSMUST00000110416 Abcc9P70170 1546 aa13.17□□□□□ -0.3
Usp8-202ENSMUST00000110416 Rhox8Q6VSS7 320 aa13.03□□□□□ -0.32
Usp8-202ENSMUST00000110416 Pcgf6Q99NA9 353 aa12.99□□□□□ -0.33
Usp8-202ENSMUST00000110416 Gm35339A0A140LHH9 1649 aa12.99□□□□□ -0.33
Usp8-202ENSMUST00000110416 Zcchc6Q5BLK4 1491 aaKnown RBP12.94□□□□□ -0.34
Usp8-202ENSMUST00000110416 Acin1Q9JIX8 1338 aaKnown RBP12.92□□□□□ -0.34
Usp8-202ENSMUST00000110416 Abcc8B2RUS7 1588 aa12.79□□□□□ -0.36
Usp8-202ENSMUST00000110416 Ccdc180J3QNE4 1664 aa12.79□□□□□ -0.36
Usp8-202ENSMUST00000110416 Supt5hO55201 1082 aaKnown RBP12.77□□□□□ -0.36
Usp8-202ENSMUST00000110416 Rtl1Q7M732 1744 aa12.73□□□□□ -0.37
Usp8-202ENSMUST00000110416 Neurod1Q60867 357 aa12.7□□□□□ -0.38
Usp8-202ENSMUST00000110416 Rpgrip1Q9EPQ2 1331 aa12.65□□□□□ -0.38
Usp8-202ENSMUST00000110416 Trim41Q5NCC3 630 aa12.63□□□□□ -0.39
Usp8-202ENSMUST00000110416 Dcaf1Q80TR8 1506 aa12.45□□□□□ -0.42
Usp8-202ENSMUST00000110416 1700123L14RikQ3V2K7 440 aa12.37□□□□□ -0.43
Usp8-202ENSMUST00000110416 Ccdc136Q3TVA9 1136 aa12.33□□□□□ -0.44
Usp8-202ENSMUST00000110416 Csrnp3P59055 597 aa12.31□□□□□ -0.44
Usp8-202ENSMUST00000110416 Gm38655A0A286YDK6 273 aa12.28□□□□□ -0.44
Usp8-202ENSMUST00000110416 Sall2Q9QX96 1004 aa12.25□□□□□ -0.45
Usp8-202ENSMUST00000110416 Ppargc1bQ8VHJ7 1014 aa12.2□□□□□ -0.46
Usp8-202ENSMUST00000110416 Zeb1Q64318 1117 aa12.19□□□□□ -0.46
Usp8-202ENSMUST00000110416 HrcG5E8J6 738 aa12.14□□□□□ -0.47
Usp8-202ENSMUST00000110416 Aebp2Q9Z248 504 aaKnown RBP12.09□□□□□ -0.47
Usp8-202ENSMUST00000110416 Cngb1E1AZ71 1325 aa12.05□□□□□ -0.48
Usp8-202ENSMUST00000110416 Chic1Q8CBW7 227 aa12□□□□□ -0.49
Usp8-202ENSMUST00000110416 Mier1Q5UAK0 511 aa11.98□□□□□ -0.49
Usp8-202ENSMUST00000110416 ScribQ80U72 1612 aa11.97□□□□□ -0.49
Usp8-202ENSMUST00000110416 Rb1cc1Q9ESK9 1588 aa11.91□□□□□ -0.5
Usp8-202ENSMUST00000110416 Ifnlr1Q8CGK5 535 aa11.89□□□□□ -0.51
Usp8-202ENSMUST00000110416 Rsf1E9PWW9 1441 aaKnown RBP11.88□□□□□ -0.51
Usp8-202ENSMUST00000110416 Anks4bQ8K3X6 423 aa11.86□□□□□ -0.51
Usp8-202ENSMUST00000110416 Gab3Q8BSM5 595 aa11.86□□□□□ -0.51
Usp8-202ENSMUST00000110416 SafbD3YXK2 937 aaKnown RBP11.82□□□□□ -0.52
Usp8-202ENSMUST00000110416 PrkcshO08795 521 aa11.82□□□□□ -0.52
Usp8-202ENSMUST00000110416 DiexfQ8BTT6 772 aaKnown RBP11.79□□□□□ -0.52
Usp8-202ENSMUST00000110416 Ccdc88bQ4QRL3 1481 aa11.79□□□□□ -0.52
Usp8-202ENSMUST00000110416 Mapk8ip2Q9ERE9 830 aa11.79□□□□□ -0.52
Usp8-202ENSMUST00000110416 Bcl11aQ9QYE3 773 aa11.79□□□□□ -0.52
Usp8-202ENSMUST00000110416 Cep164Q5DU05 1446 aa11.78□□□□□ -0.52
Usp8-202ENSMUST00000110416 CenpbP27790 599 aa11.67□□□□□ -0.54
Usp8-202ENSMUST00000110416 Baz1aO88379 1555 aa11.67□□□□□ -0.54
Usp8-202ENSMUST00000110416 Hnrnpul2Q00PI9 745 aaKnown RBP11.65□□□□□ -0.54
Usp8-202ENSMUST00000110416 Kdm5dQ62240 1548 aa11.64□□□□□ -0.55
Usp8-202ENSMUST00000110416 Fam71e1A1L3C1 212 aa11.64□□□□□ -0.55
Usp8-202ENSMUST00000110416 Ap3b1Q9Z1T1 1105 aa11.6□□□□□ -0.55
Usp8-202ENSMUST00000110416 Smarca2Q6DIC0 1577 aa11.57□□□□□ -0.56
Usp8-202ENSMUST00000110416 Aplp2Q06335 707 aa11.57□□□□□ -0.56
Usp8-202ENSMUST00000110416 Las1lA2BE28 776 aaKnown RBP11.56□□□□□ -0.56
Usp8-202ENSMUST00000110416 Wdr66E9Q743 1299 aa11.55□□□□□ -0.56
Usp8-202ENSMUST00000110416 Nop58Q6DFW4 536 aaKnown RBP11.53□□□□□ -0.56
Usp8-202ENSMUST00000110416 UbtfP25976 765 aaKnown RBP11.53□□□□□ -0.56
Usp8-202ENSMUST00000110416 Cecr2E9Q2Z1 1453 aa11.52□□□□□ -0.57
Usp8-202ENSMUST00000110416 Cdk11bP24788 784 aaKnown RBP11.47□□□□□ -0.57
Usp8-202ENSMUST00000110416 Top2bQ64511 1612 aa11.46□□□□□ -0.57
Usp8-202ENSMUST00000110416 NefmP08553 848 aa11.45□□□□□ -0.58
Usp8-202ENSMUST00000110416 ClspnQ80YR7 1315 aa11.39□□□□□ -0.59
Usp8-202ENSMUST00000110416 Eid3Q3V124 375 aa11.35□□□□□ -0.59
Usp8-202ENSMUST00000110416 Nolc1E9Q5C9 702 aaKnown RBP11.35□□□□□ -0.59
Usp8-202ENSMUST00000110416 Synj1Q8CHC4 1574 aa11.35□□□□□ -0.59
Usp8-202ENSMUST00000110416 Cc2d2aQ8CFW7 1633 aa11.31□□□□□ -0.6
Usp8-202ENSMUST00000110416 Rpap1Q80TE0 1409 aa11.3□□□□□ -0.6
Usp8-202ENSMUST00000110416 Kdm5bQ80Y84 1544 aa11.3□□□□□ -0.6
Usp8-202ENSMUST00000110416 Znf710Q3U288 666 aa11.28□□□□□ -0.6
Usp8-202ENSMUST00000110416 Plekhg3Q4VAC9 1341 aa11.27□□□□□ -0.6
Usp8-202ENSMUST00000110416 Ncapd3Q6ZQK0 1506 aa11.24□□□□□ -0.61
Usp8-202ENSMUST00000110416 Myt1Q8CFC2 1127 aa11.24□□□□□ -0.61
Usp8-202ENSMUST00000110416 Golga3P55937 1487 aa11.24□□□□□ -0.61
Usp8-202ENSMUST00000110416 Rapgef2Q8CHG7 1496 aa11.23□□□□□ -0.61
Usp8-202ENSMUST00000110416 TonslQ6NZL6 1363 aa11.19□□□□□ -0.62
Usp8-202ENSMUST00000110416 Il27Q8K3I6 234 aa11.17□□□□□ -0.62
Usp8-202ENSMUST00000110416 Pak3Q61036 559 aa11.17□□□□□ -0.62
Usp8-202ENSMUST00000110416 NacadQ5SWP3 1504 aa11.15□□□□□ -0.63
Usp8-202ENSMUST00000110416 Myt1lP97500 1187 aa11.13□□□□□ -0.63
Usp8-202ENSMUST00000110416 Egfem1Q8C088 590 aa11.1□□□□□ -0.63
Usp8-202ENSMUST00000110416 Eif4g1Q6NZJ6 1600 aaKnown RBP11.1□□□□□ -0.63
Usp8-202ENSMUST00000110416 Cep162Q6ZQ06 1403 aa11.09□□□□□ -0.63
Usp8-202ENSMUST00000110416 BicraF8VPZ9 1578 aa11.08□□□□□ -0.64
Usp8-202ENSMUST00000110416 Sin3aQ60520 1274 aaKnown RBP11.08□□□□□ -0.64
Usp8-202ENSMUST00000110416 Liat1Q810M6 228 aa11.07□□□□□ -0.64
Usp8-202ENSMUST00000110416 CftrP26361 1476 aa11.06□□□□□ -0.64
Usp8-202ENSMUST00000110416 Crybg2B7ZCC2 1516 aa11.05□□□□□ -0.64
Usp8-202ENSMUST00000110416 Sycp2Q9CUU3 1500 aa11.05□□□□□ -0.64
Usp8-202ENSMUST00000110416 AqrQ8CFQ3 1481 aaKnown RBP11.04□□□□□ -0.64
Usp8-202ENSMUST00000110416 Kcnh8P59111 1102 aa11.03□□□□□ -0.64
Usp8-202ENSMUST00000110416 Hdac5Q9Z2V6 1113 aa11.03□□□□□ -0.64
Usp8-202ENSMUST00000110416 Supt16hQ920B9 1047 aa11.02□□□□□ -0.65
Usp8-202ENSMUST00000110416 Arap1Q4LDD4 1452 aa11.01□□□□□ -0.65
Usp8-202ENSMUST00000110416 PtprkP35822 1457 aa11□□□□□ -0.65
Usp8-202ENSMUST00000110416 Top2aQ01320 1528 aaKnown RBP10.99□□□□□ -0.65
Usp8-202ENSMUST00000110416 P3h3Q8CG70 732 aa10.98□□□□□ -0.65
Usp8-202ENSMUST00000110416 Brd4Q9ESU6 1400 aaKnown RBP10.98□□□□□ -0.65
Usp8-202ENSMUST00000110416 Slc4a3P16283 1227 aa10.97□□□□□ -0.65
Usp8-202ENSMUST00000110416 Arhgap27A2AB59 869 aa10.97□□□□□ -0.65
Usp8-202ENSMUST00000110416 Ttbk1Q6PCN3 1308 aa10.96□□□□□ -0.65
Usp8-202ENSMUST00000110416 Hspa5P20029 655 aaKnown RBP10.92□□□□□ -0.66
Usp8-202ENSMUST00000110416 Clip1Q922J3 1391 aa10.92□□□□□ -0.66
Usp8-202ENSMUST00000110416 Esf1Q3V1V3 845 aaKnown RBP10.9□□□□□ -0.67
Usp8-202ENSMUST00000110416 Smarca4Q3TKT4 1613 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms