RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Dip2aQ8BWT5 1523 aa10.84□□□□□ -0.67
Ccdc47-202ENSMUST00000106865 Wbp1lQ8BGW2 348 aa10.83□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 BlmO88700 1416 aa10.83□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 A930017K11RikE0CXQ2 571 aa10.82□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 Ankrd33bQ3U0L2 486 aa10.82□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 Limd1Q9QXD8 668 aa10.82□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 Itga6Q61739 1091 aa10.81□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 Scube3Q66PY1 993 aa10.81□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 NpatQ8BMA5 1420 aa10.81□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 Ankrd26Q811D2 1581 aa10.81□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 Arap1Q4LDD4 1452 aa10.81□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 Arhgap35Q91YM2 1499 aa10.81□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 Rapgef6Q5NCJ1 1609 aa10.8□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 Eml3Q8VC03 897 aa10.8□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 Creld1Q91XD7 420 aa10.8□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 Pcgf6Q99NA9 353 aa10.8□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 Yeats2Q3TUF7 1407 aa10.8□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 Ncapd3Q6ZQK0 1506 aa10.79□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 Topaz1E5FYH1 1653 aa10.79□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 MsmpB1AWI6 139 aa10.78□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 NefmP08553 848 aa10.78□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 Znf423Q80TS5 1292 aa10.78□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 Ltbp4Q8K4G1 1666 aa10.78□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 Dip2cE9PWR4 1557 aa10.77□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 Prex2Q3LAC4 1598 aa10.77□□□□□ -0.68
Ccdc47-202ENSMUST00000106865 Ncoa2Q61026 1462 aa10.77□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Klra1P20937 262 aa10.77□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Nubp1Q9R060 320 aa10.77□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Talpid3E9PV87 1520 aa10.77□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Fyco1Q8VDC1 1437 aa10.76□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Iqsec2Q5DU25 1478 aa10.76□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 4930407I10RikD3Z5T8 1512 aa10.76□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Myt1lP97500 1187 aa10.76□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Fam193bQ3U2K0 892 aa10.76□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Fbxo11Q7TPD1 930 aaKnown RBP10.76□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Rtn1Q8K0T0 780 aa10.76□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 RereQ80TZ9 1558 aa10.76□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Hhipl2Q9D2G9 717 aa10.75□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Dbn1Q9QXS6 706 aa10.75□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Abca6Q8K441 1624 aa10.75□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Kdm5cP41230 1554 aa10.74□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 PtpreP49446 699 aa10.74□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Ptch1Q61115 1434 aa10.74□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Magi1Q6RHR9 1471 aa10.74□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Dip2bQ3UH60 1574 aa10.73□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Fam208aQ69ZR9 1610 aaKnown RBP10.73□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Ccdc61Q3UJV1 511 aa10.73□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Mical1Q8VDP3 1048 aa10.73□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Arhgef40Q3UPH7 1517 aa10.73□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Pnma5Q5DTT8 618 aa10.72□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Foxj1Q61660 421 aa10.72□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Safb2Q80YR5 991 aaKnown RBP10.72□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Pcdhb3Q91XZ7 784 aa10.72□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Jph1Q9ET80 660 aa10.72□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Erich3F6QRE9 1637 aa10.71□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Myom2Q14BI5 1463 aa10.71□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 SowahdQ8BY98 327 aa10.71□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Thap11Q9JJD0 305 aa10.71□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Apbb1Q9QXJ1 710 aa10.71□□□□□ -0.69
Ccdc47-202ENSMUST00000106865 Hsd17b7O88736 334 aa10.7□□□□□ -0.7
Ccdc47-202ENSMUST00000106865 Ccdc34Q3UI66 367 aa10.7□□□□□ -0.7
Ccdc47-202ENSMUST00000106865 Slc5a4bQ91ZP4 660 aa10.7□□□□□ -0.7
Ccdc47-202ENSMUST00000106865 Kidins220E9Q9B7 1793 aa10.7□□□□□ -0.7
Ccdc47-202ENSMUST00000106865 Catsper2A2ARP9 588 aa10.69□□□□□ -0.7
Ccdc47-202ENSMUST00000106865 FanccP50652 591 aa10.69□□□□□ -0.7
Ccdc47-202ENSMUST00000106865 Cops2P61202 443 aaKnown RBP10.69□□□□□ -0.7
Ccdc47-202ENSMUST00000106865 Rnf25Q9QZR0 456 aa10.68□□□□□ -0.7
Ccdc47-202ENSMUST00000106865 Cfap65Q3V0B4 1847 aa10.68□□□□□ -0.7
Ccdc47-202ENSMUST00000106865 Rnf166Q3U9F6 237 aa10.67□□□□□ -0.7
Ccdc47-202ENSMUST00000106865 Gli3Q61602 1583 aa10.67□□□□□ -0.7
Ccdc47-202ENSMUST00000106865 Ncoa1P70365 1447 aa10.67□□□□□ -0.7
Ccdc47-202ENSMUST00000106865 Clip1Q922J3 1391 aa10.66□□□□□ -0.7
Ccdc47-202ENSMUST00000106865 Zpr1Q62384 459 aa10.66□□□□□ -0.7
Ccdc47-202ENSMUST00000106865 Trak1Q6PD31 939 aa10.66□□□□□ -0.7
Ccdc47-202ENSMUST00000106865 Map3k9Q3U1V8 1077 aa10.65□□□□□ -0.7
Ccdc47-202ENSMUST00000106865 Pip4k2bQ80XI4 416 aa10.65□□□□□ -0.7
Ccdc47-202ENSMUST00000106865 Phlpp1Q8CHE4 1687 aa10.65□□□□□ -0.7
Ccdc47-202ENSMUST00000106865 Trpm1Q2TV84 1622 aa10.63□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Pla2g2cP48076 150 aa10.63□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Tsen34Q8BMZ5 316 aa10.63□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Gtf2ird1Q9JI57 1104 aaKnown RBP10.63□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Cdc42bpaQ3UU96 1719 aa10.63□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Gemin5Q8BX17 1502 aaKnown RBP10.63□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Hecw1Q8K4P8 1604 aa10.62□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Dennd4bQ3U1Y4 1499 aa10.62□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 DgkhD3YXJ0 1156 aa10.62□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Hspa1lP16627 641 aa10.62□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Krtap4-1Q3UUY3 169 aa10.62□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Fut2Q9JL27 347 aa10.62□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Kif27Q7M6Z4 1394 aa10.62□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Nek1P51954 1203 aa10.61□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Trim26Q99PN3 545 aa10.61□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Mei1Q9D4I2 1268 aa10.61□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Kif7B7ZNG0 1348 aa10.6□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Arhgap5P97393 1501 aa10.6□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Kiaa1551Q5DTW7 1521 aa10.6□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Ogfod1Q3U0K8 545 aa10.6□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Rbm26Q6NZN0 1012 aaKnown RBP10.6□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 Atp2b4Q6Q477 1205 aa10.6□□□□□ -0.71
Ccdc47-202ENSMUST00000106865 TbcelQ8C5W3 424 aa10.6□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms