RNA–Protein interactions for RNA: ENSMUST00000093346.5

H2afv-201, Transcript of Histone H2A.V, mousemouse

TSL 1 (best) BASIC

Gene H2afv, Length 519 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2afv-201ENSMUST00000093346 Kif16bB1AVY7 1312 aa18.11■□□□□ 0.49
H2afv-201ENSMUST00000093346 Slit2Q9R1B9 1521 aa18.1■□□□□ 0.49
H2afv-201ENSMUST00000093346 NinlQ6ZQ12 1394 aa18.1■□□□□ 0.49
H2afv-201ENSMUST00000093346 Fbln2P37889 1221 aa18.1■□□□□ 0.49
H2afv-201ENSMUST00000093346 Bcl9lQ67FY2 1494 aa18.08■□□□□ 0.49
H2afv-201ENSMUST00000093346 Tex14Q7M6U3 1450 aa18.08■□□□□ 0.49
H2afv-201ENSMUST00000093346 ClspnQ80YR7 1315 aa18.08■□□□□ 0.49
H2afv-201ENSMUST00000093346 Tmf1B9EKI3 1091 aa18.08■□□□□ 0.48
H2afv-201ENSMUST00000093346 Fam184bQ0KK56 942 aa18.08■□□□□ 0.48
H2afv-201ENSMUST00000093346 Arhgef1Q61210 920 aaKnown RBP18.08■□□□□ 0.48
H2afv-201ENSMUST00000093346 Lrrc59Q922Q8 307 aaKnown RBP18.08■□□□□ 0.48
H2afv-201ENSMUST00000093346 Tet3Q8BG87 1668 aa18.08■□□□□ 0.48
H2afv-201ENSMUST00000093346 Astn2Q80Z10 1352 aa18.07■□□□□ 0.48
H2afv-201ENSMUST00000093346 PaskQ8CEE6 1383 aa18.07■□□□□ 0.48
H2afv-201ENSMUST00000093346 Smim5Q8BT42 78 aa18.07■□□□□ 0.48
H2afv-201ENSMUST00000093346 ZgpatQ8VDM1 511 aa18.07■□□□□ 0.48
H2afv-201ENSMUST00000093346 Acsbg1Q99PU5 721 aa18.07■□□□□ 0.48
H2afv-201ENSMUST00000093346 Col16a1Q8BLX7 1580 aa18.07■□□□□ 0.48
H2afv-201ENSMUST00000093346 Lrp6O88572 1613 aa18.06■□□□□ 0.48
H2afv-201ENSMUST00000093346 Emilin2Q8K482 1074 aa18.06■□□□□ 0.48
H2afv-201ENSMUST00000093346 PrxO55103 1391 aa18.05■□□□□ 0.48
H2afv-201ENSMUST00000093346 HdgfP51859 237 aaKnown RBP18.05■□□□□ 0.48
H2afv-201ENSMUST00000093346 Cypt2Q6P924 180 aa18.05■□□□□ 0.48
H2afv-201ENSMUST00000093346 Dzip1Q8BMD2 852 aa18.05■□□□□ 0.48
H2afv-201ENSMUST00000093346 MypopQ8R4U1 393 aa18.05■□□□□ 0.48
H2afv-201ENSMUST00000093346 Ncoa4Q5U4H9 625 aa18.04■□□□□ 0.48
H2afv-201ENSMUST00000093346 Plekhg5Q66T02 1073 aa18.04■□□□□ 0.48
H2afv-201ENSMUST00000093346 Ddx54Q8K4L0 874 aaKnown RBP18.04■□□□□ 0.48
H2afv-201ENSMUST00000093346 Nid2O88322 1403 aa18.03■□□□□ 0.48
H2afv-201ENSMUST00000093346 Ncapd2Q8K2Z4 1392 aa18.03■□□□□ 0.48
H2afv-201ENSMUST00000093346 Cdhr2E9Q7P9 1308 aa18.02■□□□□ 0.48
H2afv-201ENSMUST00000093346 Gm21190A0A0G2JGJ6 266 aa18.02■□□□□ 0.48
H2afv-201ENSMUST00000093346 Dennd6aQ8BH65 605 aa18.02■□□□□ 0.48
H2afv-201ENSMUST00000093346 Pank3Q8R2W9 370 aa18.02■□□□□ 0.48
H2afv-201ENSMUST00000093346 Cdk12Q14AX6 1484 aaKnown RBP18.01■□□□□ 0.47
H2afv-201ENSMUST00000093346 GapdhsQ64467 440 aa18.01■□□□□ 0.47
H2afv-201ENSMUST00000093346 Nfat5Q9WV30 1534 aa18■□□□□ 0.47
H2afv-201ENSMUST00000093346 Mdc1Q5PSV9 1707 aa18■□□□□ 0.47
H2afv-201ENSMUST00000093346 CemipQ8BI06 1361 aa17.99■□□□□ 0.47
H2afv-201ENSMUST00000093346 Prdm10Q3UTQ7 1184 aa17.98■□□□□ 0.47
H2afv-201ENSMUST00000093346 Scaf1Q5U4C3 1256 aaKnown RBP17.98■□□□□ 0.47
H2afv-201ENSMUST00000093346 Dmrt2Q8BG36 561 aa17.98■□□□□ 0.47
H2afv-201ENSMUST00000093346 Kcnh5Q920E3 988 aa17.98■□□□□ 0.47
H2afv-201ENSMUST00000093346 Nlgn1Q99K10 843 aa17.98■□□□□ 0.47
H2afv-201ENSMUST00000093346 Inpp5dQ9ES52 1191 aa17.97■□□□□ 0.47
H2afv-201ENSMUST00000093346 Gm21698A0A087WQP8 267 aa17.96■□□□□ 0.47
H2afv-201ENSMUST00000093346 Gm21671G3UY31 267 aa17.96■□□□□ 0.47
H2afv-201ENSMUST00000093346 Rtl5Q5DTT4 599 aa17.95■□□□□ 0.46
H2afv-201ENSMUST00000093346 Txnrd1Q9JMH6 613 aa17.95■□□□□ 0.46
H2afv-201ENSMUST00000093346 Smg6P61406 1418 aaKnown RBP17.95■□□□□ 0.46
H2afv-201ENSMUST00000093346 IbtkQ6ZPR6 1352 aaKnown RBP17.94■□□□□ 0.46
H2afv-201ENSMUST00000093346 Scn7aB1AYL1 1681 aa17.94■□□□□ 0.46
H2afv-201ENSMUST00000093346 Zscan10Q3URR7 782 aa17.94■□□□□ 0.46
H2afv-201ENSMUST00000093346 Cabp4Q8VHC5 271 aa17.94■□□□□ 0.46
H2afv-201ENSMUST00000093346 Ubr1O70481 1757 aa17.94■□□□□ 0.46
H2afv-201ENSMUST00000093346 TnrQ8BYI9 1358 aa17.92■□□□□ 0.46
H2afv-201ENSMUST00000093346 Dcaf11Q91VU6 549 aa17.92■□□□□ 0.46
H2afv-201ENSMUST00000093346 Gprasp1Q5U4C1 1347 aa17.92■□□□□ 0.46
H2afv-201ENSMUST00000093346 Fmnl2A2APV2 1086 aa17.91■□□□□ 0.46
H2afv-201ENSMUST00000093346 InhbeO08717 350 aa17.91■□□□□ 0.46
H2afv-201ENSMUST00000093346 Ano8Q6PB70 1060 aa17.91■□□□□ 0.46
H2afv-201ENSMUST00000093346 Chd4Q6PDQ2 1915 aaKnown RBP17.9■□□□□ 0.46
H2afv-201ENSMUST00000093346 Hoxb7P09024 217 aa17.9■□□□□ 0.46
H2afv-201ENSMUST00000093346 Card10P58660 1021 aa17.9■□□□□ 0.46
H2afv-201ENSMUST00000093346 TatQ8QZR1 454 aa17.9■□□□□ 0.46
H2afv-201ENSMUST00000093346 Aebp2Q9Z248 504 aaKnown RBP17.9■□□□□ 0.46
H2afv-201ENSMUST00000093346 Nckap5lQ6GQX2 1323 aa17.9■□□□□ 0.46
H2afv-201ENSMUST00000093346 FancaQ9JL70 1439 aa17.89■□□□□ 0.46
H2afv-201ENSMUST00000093346 Shank2Q80Z38 1476 aa17.88■□□□□ 0.45
H2afv-201ENSMUST00000093346 Robo1O89026 1612 aa17.88■□□□□ 0.45
H2afv-201ENSMUST00000093346 Wdr66E9Q743 1299 aa17.88■□□□□ 0.45
H2afv-201ENSMUST00000093346 Dnajc10Q9DC23 793 aa17.88■□□□□ 0.45
H2afv-201ENSMUST00000093346 Pard3Q99NH2 1333 aa17.88■□□□□ 0.45
H2afv-201ENSMUST00000093346 Birc3O08863 600 aa17.87■□□□□ 0.45
H2afv-201ENSMUST00000093346 Slx1bQ8BX32 270 aa17.87■□□□□ 0.45
H2afv-201ENSMUST00000093346 Kif7B7ZNG0 1348 aa17.86■□□□□ 0.45
H2afv-201ENSMUST00000093346 Map2P20357 1828 aa17.85■□□□□ 0.45
H2afv-201ENSMUST00000093346 Eno4Q8C042 619 aa17.85■□□□□ 0.45
H2afv-201ENSMUST00000093346 Amotl2Q8K371 772 aa17.85■□□□□ 0.45
H2afv-201ENSMUST00000093346 Psrc1Q9D0P7 329 aa17.85■□□□□ 0.45
H2afv-201ENSMUST00000093346 Zeb2Q9R0G7 1215 aa17.84■□□□□ 0.45
H2afv-201ENSMUST00000093346 Nol11Q8BJW5 723 aaKnown RBP17.83■□□□□ 0.44
H2afv-201ENSMUST00000093346 Sf3b2Q3UJB0 878 aaKnown RBP17.82■□□□□ 0.44
H2afv-201ENSMUST00000093346 Rad17Q6NXW6 688 aa17.82■□□□□ 0.44
H2afv-201ENSMUST00000093346 Tnrc6cQ3UHC0 1690 aaKnown RBP17.81■□□□□ 0.44
H2afv-201ENSMUST00000093346 Hoxc9P09633 260 aa17.77■□□□□ 0.44
H2afv-201ENSMUST00000093346 Cacna1sQ02789 1880 aa17.76■□□□□ 0.43
H2afv-201ENSMUST00000093346 Ccdc129Q14B48 1034 aa17.76■□□□□ 0.43
H2afv-201ENSMUST00000093346 Tmem132eQ6IEE6 982 aa17.76■□□□□ 0.43
H2afv-201ENSMUST00000093346 Pm20d1Q8C165 503 aa17.76■□□□□ 0.43
H2afv-201ENSMUST00000093346 Sgsm1Q8BPQ7 1093 aa17.75■□□□□ 0.43
H2afv-201ENSMUST00000093346 Mapk8ip2Q9ERE9 830 aa17.75■□□□□ 0.43
H2afv-201ENSMUST00000093346 Slit1Q80TR4 1531 aa17.74■□□□□ 0.43
H2afv-201ENSMUST00000093346 Cald1E9QA15 768 aaKnown RBP17.74■□□□□ 0.43
H2afv-201ENSMUST00000093346 CrklP47941 303 aa17.74■□□□□ 0.43
H2afv-201ENSMUST00000093346 RgmbQ7TQ33 436 aa17.74■□□□□ 0.43
H2afv-201ENSMUST00000093346 Ltbp1Q8CG19 1712 aa17.73■□□□□ 0.43
H2afv-201ENSMUST00000093346 Plekhd1B2RPU2 505 aa17.73■□□□□ 0.43
H2afv-201ENSMUST00000093346 OptnQ8K3K8 584 aa17.73■□□□□ 0.43
H2afv-201ENSMUST00000093346 Ptpn23Q6PB44 1692 aa17.73■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms