RNA–Protein interactions for RNA: ENSMUST00000087253.10

Tro-201, Transcript of Tro protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tro, Length 3,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-201ENSMUST00000087253 Fgd1P52734 960 aa13.41□□□□□ -0.26
Tro-201ENSMUST00000087253 Puf60Q3UEB3 564 aaKnown RBP13.4□□□□□ -0.26
Tro-201ENSMUST00000087253 Cluap1Q8R3P7 413 aa13.4□□□□□ -0.26
Tro-201ENSMUST00000087253 Ipo4Q8VI75 1082 aa13.4□□□□□ -0.26
Tro-201ENSMUST00000087253 Rlbp1Q9Z275 317 aa13.4□□□□□ -0.26
Tro-201ENSMUST00000087253 Cps1Q8C196 1500 aa13.39□□□□□ -0.27
Tro-201ENSMUST00000087253 Usp32F8VPZ3 1604 aa13.39□□□□□ -0.27
Tro-201ENSMUST00000087253 Ppp1r9bQ6R891 817 aaKnown RBP13.39□□□□□ -0.27
Tro-201ENSMUST00000087253 Ralbp1Q62172 648 aa13.39□□□□□ -0.27
Tro-201ENSMUST00000087253 Ecm2Q5FW85 670 aa13.38□□□□□ -0.27
Tro-201ENSMUST00000087253 Pik3c2bE9QAN8 1632 aa13.38□□□□□ -0.27
Tro-201ENSMUST00000087253 Duxf3A0A0N4SV92 674 aa13.38□□□□□ -0.27
Tro-201ENSMUST00000087253 Ksr2Q3UVC0 959 aa13.37□□□□□ -0.27
Tro-201ENSMUST00000087253 Trim58Q5NCC9 485 aa13.37□□□□□ -0.27
Tro-201ENSMUST00000087253 Uspl1Q3ULM6 1089 aa13.37□□□□□ -0.27
Tro-201ENSMUST00000087253 Htatsf1Q8BGC0 757 aa13.37□□□□□ -0.27
Tro-201ENSMUST00000087253 Bcl9Q9D219 1425 aa13.36□□□□□ -0.27
Tro-201ENSMUST00000087253 Apaf1O88879 1249 aa13.35□□□□□ -0.27
Tro-201ENSMUST00000087253 Tnpo1Q8BFY9 898 aaKnown RBP13.35□□□□□ -0.27
Tro-201ENSMUST00000087253 Kiaa1107Q80TK0 1369 aa13.34□□□□□ -0.27
Tro-201ENSMUST00000087253 Pnmal2G3X9N3 661 aa13.34□□□□□ -0.27
Tro-201ENSMUST00000087253 Dnttip2Q8R2M2 758 aaKnown RBP13.33□□□□□ -0.28
Tro-201ENSMUST00000087253 Mfap1aC0HKD8 439 aaKnown RBP13.33□□□□□ -0.28
Tro-201ENSMUST00000087253 Mfap1bC0HKD9 439 aaKnown RBP13.33□□□□□ -0.28
Tro-201ENSMUST00000087253 Afap1Q80YS6 731 aa13.33□□□□□ -0.28
Tro-201ENSMUST00000087253 Dnajc5gQ8C632 165 aa13.33□□□□□ -0.28
Tro-201ENSMUST00000087253 GsdmaQ9EST1 446 aa13.33□□□□□ -0.28
Tro-201ENSMUST00000087253 U2af1Q9D883 239 aaKnown RBP13.32□□□□□ -0.28
Tro-201ENSMUST00000087253 Mdc1Q5PSV9 1707 aa13.32□□□□□ -0.28
Tro-201ENSMUST00000087253 Ppp2r3aB2RXC8 1150 aa13.32□□□□□ -0.28
Tro-201ENSMUST00000087253 Stag3O70576 1240 aa13.32□□□□□ -0.28
Tro-201ENSMUST00000087253 Znf330Q922H9 316 aa13.32□□□□□ -0.28
Tro-201ENSMUST00000087253 Sptbn5F6UCX4 1208 aa13.31□□□□□ -0.28
Tro-201ENSMUST00000087253 N4bp2F8VQG7 1678 aaKnown RBP13.31□□□□□ -0.28
Tro-201ENSMUST00000087253 Ppp1r3fQ9JIG4 799 aa13.31□□□□□ -0.28
Tro-201ENSMUST00000087253 Kif1aP33173 1695 aa13.3□□□□□ -0.28
Tro-201ENSMUST00000087253 Pdlim2Q8R1G6 349 aa13.3□□□□□ -0.28
Tro-201ENSMUST00000087253 D430041D05RikF6ZGR6 1678 aa13.3□□□□□ -0.28
Tro-201ENSMUST00000087253 Scaf11E9PZM7 1456 aaKnown RBP13.29□□□□□ -0.28
Tro-201ENSMUST00000087253 Tnrc6bQ8BKI2 1810 aaKnown RBP13.29□□□□□ -0.28
Tro-201ENSMUST00000087253 Zmym3Q9JLM4 1370 aa13.29□□□□□ -0.28
Tro-201ENSMUST00000087253 Iqsec2Q5DU25 1478 aa13.29□□□□□ -0.28
Tro-201ENSMUST00000087253 P2rx7Q9Z1M0 595 aa13.28□□□□□ -0.28
Tro-201ENSMUST00000087253 Tsen2Q6P7W5 460 aa13.28□□□□□ -0.28
Tro-201ENSMUST00000087253 Rims2Q9EQZ7 1530 aa13.27□□□□□ -0.28
Tro-201ENSMUST00000087253 Rabep1O35551 862 aa13.27□□□□□ -0.29
Tro-201ENSMUST00000087253 Tmc1Q8R4P5 757 aa13.27□□□□□ -0.29
Tro-201ENSMUST00000087253 AU015836B2RUM3 263 aa13.26□□□□□ -0.29
Tro-201ENSMUST00000087253 Als2Q920R0 1651 aa13.26□□□□□ -0.29
Tro-201ENSMUST00000087253 4930407I10RikD3Z5T8 1512 aa13.26□□□□□ -0.29
Tro-201ENSMUST00000087253 Senp3Q9EP97 568 aaKnown RBP13.26□□□□□ -0.29
Tro-201ENSMUST00000087253 Znf521Q6KAS7 1311 aa13.26□□□□□ -0.29
Tro-201ENSMUST00000087253 Map4k4P97820 1233 aaKnown RBP13.26□□□□□ -0.29
Tro-201ENSMUST00000087253 Mon2Q80TL7 1715 aa13.25□□□□□ -0.29
Tro-201ENSMUST00000087253 Znf541Q0GGX2 1363 aa13.25□□□□□ -0.29
Tro-201ENSMUST00000087253 Pik3r4Q8VD65 1358 aa13.25□□□□□ -0.29
Tro-201ENSMUST00000087253 CenpjQ569L8 1344 aa13.25□□□□□ -0.29
Tro-201ENSMUST00000087253 Znf692Q3U381 531 aa13.25□□□□□ -0.29
Tro-201ENSMUST00000087253 NalcnQ8BXR5 1738 aa13.25□□□□□ -0.29
Tro-201ENSMUST00000087253 C5P06684 1680 aa13.24□□□□□ -0.29
Tro-201ENSMUST00000087253 Ccar1Q8CH18 1146 aaKnown RBP13.24□□□□□ -0.29
Tro-201ENSMUST00000087253 Plcb2A3KGF7 1181 aa13.24□□□□□ -0.29
Tro-201ENSMUST00000087253 Kif20bQ80WE4 1774 aaKnown RBP13.23□□□□□ -0.29
Tro-201ENSMUST00000087253 Nutm1Q8BHP2 1126 aa13.23□□□□□ -0.29
Tro-201ENSMUST00000087253 Spef2Q8C9J3 1734 aa13.23□□□□□ -0.29
Tro-201ENSMUST00000087253 Topaz1E5FYH1 1653 aa13.23□□□□□ -0.29
Tro-201ENSMUST00000087253 Cald1E9QA15 768 aaKnown RBP13.23□□□□□ -0.29
Tro-201ENSMUST00000087253 Atp1b4Q99ME6 356 aa13.23□□□□□ -0.29
Tro-201ENSMUST00000087253 Alpk3Q924C5 1678 aa13.23□□□□□ -0.29
Tro-201ENSMUST00000087253 IghaA0A0A6YXW6 389 aa13.22□□□□□ -0.29
Tro-201ENSMUST00000087253 Zranb1Q7M760 708 aa13.22□□□□□ -0.29
Tro-201ENSMUST00000087253 Stk26Q99JT2 416 aa13.22□□□□□ -0.29
Tro-201ENSMUST00000087253 Kcnn1Q9EQR3 537 aa13.22□□□□□ -0.29
Tro-201ENSMUST00000087253 Thsd7aQ69ZU6 1645 aa13.22□□□□□ -0.29
Tro-201ENSMUST00000087253 IbtkQ6ZPR6 1352 aaKnown RBP13.22□□□□□ -0.29
Tro-201ENSMUST00000087253 Catsper2A2ARP9 588 aa13.22□□□□□ -0.29
Tro-201ENSMUST00000087253 Dusp27Q148W8 1138 aa13.22□□□□□ -0.29
Tro-201ENSMUST00000087253 Tbc1d32Q3URV1 1296 aa13.22□□□□□ -0.29
Tro-201ENSMUST00000087253 Pknox2Q8BG99 474 aa13.22□□□□□ -0.29
Tro-201ENSMUST00000087253 Exosc9Q9JHI7 438 aaKnown RBP13.22□□□□□ -0.29
Tro-201ENSMUST00000087253 AU019823E9PUQ3 292 aa13.21□□□□□ -0.29
Tro-201ENSMUST00000087253 Vsig10D3YX43 558 aa13.21□□□□□ -0.29
Tro-201ENSMUST00000087253 Rfx1P48377 963 aa13.21□□□□□ -0.29
Tro-201ENSMUST00000087253 Pdcl3Q8BVF2 240 aa13.2□□□□□ -0.3
Tro-201ENSMUST00000087253 DekQ7TNV0 380 aaKnown RBP13.2□□□□□ -0.3
Tro-201ENSMUST00000087253 Ccdc60Q8C4J0 545 aa13.2□□□□□ -0.3
Tro-201ENSMUST00000087253 IqubQ8CDK3 788 aa13.2□□□□□ -0.3
Tro-201ENSMUST00000087253 PtpruB1AUH1 1446 aa13.19□□□□□ -0.3
Tro-201ENSMUST00000087253 Fam135bQ9DAI6 1403 aa13.19□□□□□ -0.3
Tro-201ENSMUST00000087253 Aplp1Q03157 653 aa13.19□□□□□ -0.3
Tro-201ENSMUST00000087253 Ssh1Q76I79 1042 aa13.19□□□□□ -0.3
Tro-201ENSMUST00000087253 Atl3Q91YH5 541 aa13.19□□□□□ -0.3
Tro-201ENSMUST00000087253 Med1Q925J9 1575 aa13.19□□□□□ -0.3
Tro-201ENSMUST00000087253 Nectin2P32507 530 aa13.18□□□□□ -0.3
Tro-201ENSMUST00000087253 Tmco5bQ80X59 307 aa13.18□□□□□ -0.3
Tro-201ENSMUST00000087253 Ncbp3Q8BZR9 615 aaKnown RBP13.18□□□□□ -0.3
Tro-201ENSMUST00000087253 Rreb1Q3UH06 1700 aaKnown RBP13.18□□□□□ -0.3
Tro-201ENSMUST00000087253 Scn7aB1AYL1 1681 aa13.18□□□□□ -0.3
Tro-201ENSMUST00000087253 Shq1Q7TMX5 569 aa13.18□□□□□ -0.3
Tro-201ENSMUST00000087253 Cog6Q8R3I3 657 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms