RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 U2af1Q9D883 239 aaKnown RBP5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Depdc5P61460 1591 aa5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Trim55G3X8Y1 545 aa5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Hoxb7P09024 217 aa5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Gps2Q921N8 327 aa5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 PrxO55103 1391 aa5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 SlkO54988 1233 aa5.52□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Cdc42bpaQ3UU96 1719 aa5.51□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Slc4a3P16283 1227 aa5.51□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Uggt1Q6P5E4 1551 aa5.51□□□□□ -1.53
Prkdc-201ENSMUST00000023352 AlkP97793 1621 aa5.51□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Cavin1O54724 392 aa5.51□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Usp40Q8BWR4 1235 aa5.51□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Abcc6Q9R1S7 1498 aa5.51□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Gsdma3Q5Y4Y6 464 aa5.51□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Iffo2Q8R2V2 512 aa5.51□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Slc4a2P13808 1237 aaKnown RBP5.51□□□□□ -1.53
Prkdc-201ENSMUST00000023352 1700010I14RikQ7TPG0 532 aa5.51□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Necab1Q8BG18 352 aa5.51□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Ccdc183A2AJB1 534 aa5.51□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Znf692Q3U381 531 aa5.51□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Prdm10Q3UTQ7 1184 aa5.51□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Fan1Q69ZT1 1020 aa5.51□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Pabpn1Q8CCS6 302 aaKnown RBP5.51□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Vsig10D3YX43 558 aa5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Tex14Q7M6U3 1450 aa5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Lekr1B2RVN1 116 aa5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 B4galnt3Q6L8S8 986 aa5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Dnmt1P13864 1620 aaKnown RBP5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Pola1P33609 1465 aa5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Filip1lQ6P6L0 1131 aa5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Cep170Q6A065 1588 aa5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 ChgaP26339 463 aaKnown RBP5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Atp7aQ64430 1491 aa5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 KdrP35918 1367 aa5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Rassf8Q8CJ96 419 aa5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Abcc3B2RX12 1523 aa5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Fam107bQ3TGF2 131 aa5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Mns1Q61884 491 aa5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Sycp1Q62209 993 aa5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Kdm5aQ3UXZ9 1690 aa5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 PdcQ9QW08 244 aa5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Gm16486A0A1D5RMD1 1434 aa5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Ssh2Q5SW75 1423 aa5.5□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Abcc1O35379 1528 aa5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Tsen2Q6P7W5 460 aa5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Nphp4P59240 1425 aa5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Tarbp1E9Q368 1579 aa5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Gcc1Q9D4H2 778 aa5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Lrriq1Q0P5X1 1673 aa5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Adgrb2Q8CGM1 1561 aa5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Kif1bQ60575 1816 aaKnown RBP5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Zbtb4Q5F293 982 aa5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Myom2Q14BI5 1463 aa5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Stk24Q99KH8 431 aa5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Itsn2Q9Z0R6 1659 aa5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Cep152A2AUM9 1736 aaKnown RBP5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Dnaaf4Q8R368 420 aa5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Dhx9O70133 1380 aaKnown RBP5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 MecomP14404 1042 aa5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Eif3aP23116 1344 aaKnown RBP5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Plekhg1F6S200 1446 aa5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Rims2Q9EQZ7 1530 aa5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Kdm5cP41230 1554 aa5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Zfp444Q3TDV8 331 aaKnown RBP5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Inpp5dQ9ES52 1191 aa5.49□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Puf60Q3UEB3 564 aaKnown RBP5.48□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Cnga1P29974 684 aa5.48□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Cers3Q1A3B0 383 aa5.48□□□□□ -1.53
Prkdc-201ENSMUST00000023352 PalldQ9ET54 1408 aa5.48□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Paip2Q9D6V8 124 aa5.48□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Cavin2Q63918 418 aaKnown RBP5.48□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Ssr1Q9CY50 286 aaKnown RBP5.48□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Znf518aB2RRF6 1478 aaKnown RBP5.48□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Ttll13A4Q9F6 804 aa5.48□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Gm21969J3QJZ1 289 aa5.48□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Nop14Q8R3N1 860 aaKnown RBP5.48□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Ppp2r1aQ76MZ3 589 aa5.48□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Ccdc30Q8BVF4 654 aa5.48□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Def6Q8C2K1 630 aa5.48□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Ccdc83Q9D4V3 305 aa5.48□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Rnf20Q5DTM8 973 aa5.48□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Tubb4bP68372 445 aaKnown RBP5.47□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Ak7Q9D2H2 614 aa5.47□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Swt1Q9DBQ9 907 aa5.47□□□□□ -1.53
Prkdc-201ENSMUST00000023352 OptnQ8K3K8 584 aa5.47□□□□□ -1.53
Prkdc-201ENSMUST00000023352 PhaxQ9JJT9 385 aaKnown RBP5.47□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Synj2Q9D2G5 1434 aa5.47□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Rpgrip1lQ8CG73 1264 aa5.47□□□□□ -1.53
Prkdc-201ENSMUST00000023352 SkilQ60665 675 aa5.47□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Ccdc94Q9D6J3 314 aa5.47□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Znf335A2A5K6 1337 aa5.47□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Spryd3E9Q9B3 442 aa5.47□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Pip4k2aO70172 405 aa5.47□□□□□ -1.53
Prkdc-201ENSMUST00000023352 CrebrfQ8CDG5 640 aaKnown RBP5.47□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Clcn1Q64347 994 aa5.47□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Ap3b2Q9JME5 1082 aa5.47□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Atp10aO54827 1508 aa5.47□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Adgrl3Q80TS3 1537 aa5.47□□□□□ -1.53
Prkdc-201ENSMUST00000023352 Zfp644E9QA22 1323 aa5.47□□□□□ -1.53
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms