RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Gtf3c3Q3TMP1 882 aa26.84■■□□□ 1.89
Trim47-201ENSMUST00000021120 Rab3gap2Q8BMG7 1366 aa26.83■■□□□ 1.89
Trim47-201ENSMUST00000021120 CatipB9EKE5 520 aa26.82■■□□□ 1.88
Trim47-201ENSMUST00000021120 Col18a1P39061 1774 aa26.82■■□□□ 1.88
Trim47-201ENSMUST00000021120 Iqsec2Q5DU25 1478 aa26.81■■□□□ 1.88
Trim47-201ENSMUST00000021120 KdrP35918 1367 aa26.81■■□□□ 1.88
Trim47-201ENSMUST00000021120 Kank1E9Q238 1360 aa26.8■■□□□ 1.88
Trim47-201ENSMUST00000021120 Sox12Q04890 314 aa26.8■■□□□ 1.88
Trim47-201ENSMUST00000021120 NgefQ8CHT1 710 aa26.8■■□□□ 1.88
Trim47-201ENSMUST00000021120 Mon2Q80TL7 1715 aa26.8■■□□□ 1.88
Trim47-201ENSMUST00000021120 Ppp2r1aQ76MZ3 589 aa26.8■■□□□ 1.88
Trim47-201ENSMUST00000021120 Slc4a3P16283 1227 aa26.79■■□□□ 1.88
Trim47-201ENSMUST00000021120 Slain2Q8CI08 581 aa26.79■■□□□ 1.88
Trim47-201ENSMUST00000021120 Idi1P58044 227 aa26.78■■□□□ 1.88
Trim47-201ENSMUST00000021120 Tex14Q7M6U3 1450 aa26.78■■□□□ 1.88
Trim47-201ENSMUST00000021120 Rpgrip1lQ8CG73 1264 aa26.77■■□□□ 1.88
Trim47-201ENSMUST00000021120 Ap3b2Q9JME5 1082 aa26.77■■□□□ 1.88
Trim47-201ENSMUST00000021120 Sipa1l2Q80TE4 1722 aa26.75■■□□□ 1.87
Trim47-201ENSMUST00000021120 Evi5lH3BKQ3 813 aa26.75■■□□□ 1.87
Trim47-201ENSMUST00000021120 Pknox2Q8BG99 474 aa26.75■■□□□ 1.87
Trim47-201ENSMUST00000021120 Kif16bB1AVY7 1312 aa26.73■■□□□ 1.87
Trim47-201ENSMUST00000021120 Kcnh8P59111 1102 aa26.72■■□□□ 1.87
Trim47-201ENSMUST00000021120 Gli3Q61602 1583 aa26.72■■□□□ 1.87
Trim47-201ENSMUST00000021120 Kif1aP33173 1695 aa26.71■■□□□ 1.87
Trim47-201ENSMUST00000021120 Q7TT23 1179 aa26.7■■□□□ 1.87
Trim47-201ENSMUST00000021120 Znf335A2A5K6 1337 aa26.7■■□□□ 1.86
Trim47-201ENSMUST00000021120 IbtkQ6ZPR6 1352 aaKnown RBP26.69■■□□□ 1.86
Trim47-201ENSMUST00000021120 Erbb3Q61526 1339 aa26.69■■□□□ 1.86
Trim47-201ENSMUST00000021120 Nlrp6Q91WS2 869 aa26.68■■□□□ 1.86
Trim47-201ENSMUST00000021120 Tmem2Q5FWI3 1383 aa26.67■■□□□ 1.86
Trim47-201ENSMUST00000021120 Cald1E9QA15 768 aaKnown RBP26.65■■□□□ 1.86
Trim47-201ENSMUST00000021120 Irx3P81067 507 aa26.65■■□□□ 1.86
Trim47-201ENSMUST00000021120 Zscan21Q07231 555 aa26.65■■□□□ 1.86
Trim47-201ENSMUST00000021120 TnikP83510 1323 aa26.64■■□□□ 1.85
Trim47-201ENSMUST00000021120 Chd4Q6PDQ2 1915 aaKnown RBP26.63■■□□□ 1.85
Trim47-201ENSMUST00000021120 Atf3Q60765 181 aa26.63■■□□□ 1.85
Trim47-201ENSMUST00000021120 Wnk3Q80XP9 1757 aa26.62■■□□□ 1.85
Trim47-201ENSMUST00000021120 Astn2Q80Z10 1352 aa26.62■■□□□ 1.85
Trim47-201ENSMUST00000021120 Pik3c2aQ61194 1686 aa26.59■■□□□ 1.85
Trim47-201ENSMUST00000021120 Amigo3Q8C2S7 508 aa26.59■■□□□ 1.85
Trim47-201ENSMUST00000021120 Prkrip1Q9CWV6 186 aaKnown RBP26.59■■□□□ 1.85
Trim47-201ENSMUST00000021120 Atf7ipQ7TT18 1306 aa26.57■■□□□ 1.84
Trim47-201ENSMUST00000021120 Camta1A2A891 1682 aa26.57■■□□□ 1.84
Trim47-201ENSMUST00000021120 Plcd4Q8K3R3 807 aa26.57■■□□□ 1.84
Trim47-201ENSMUST00000021120 Frmpd2A0A140LI67 1392 aa26.55■■□□□ 1.84
Trim47-201ENSMUST00000021120 Birc3O08863 600 aa26.54■■□□□ 1.84
Trim47-201ENSMUST00000021120 Zfp444Q3TDV8 331 aaKnown RBP26.54■■□□□ 1.84
Trim47-201ENSMUST00000021120 Kcna6Q61923 529 aa26.54■■□□□ 1.84
Trim47-201ENSMUST00000021120 Col16a1Q8BLX7 1580 aa26.54■■□□□ 1.84
Trim47-201ENSMUST00000021120 Farp2Q91VS8 1065 aa26.52■■□□□ 1.84
Trim47-201ENSMUST00000021120 Mak16Q8BGS0 296 aaKnown RBP26.51■■□□□ 1.84
Trim47-201ENSMUST00000021120 Cdk12Q14AX6 1484 aaKnown RBP26.51■■□□□ 1.83
Trim47-201ENSMUST00000021120 Brinp3Q499E0 766 aa26.5■■□□□ 1.83
Trim47-201ENSMUST00000021120 Wdr17E9Q271 1322 aa26.5■■□□□ 1.83
Trim47-201ENSMUST00000021120 Hsp90aa1P07901 733 aaKnown RBP26.5■■□□□ 1.83
Trim47-201ENSMUST00000021120 Slc35g1Q8BY79 368 aa26.49■■□□□ 1.83
Trim47-201ENSMUST00000021120 Iqcf3Q9D498 203 aa26.49■■□□□ 1.83
Trim47-201ENSMUST00000021120 Mdc1Q5PSV9 1707 aa26.49■■□□□ 1.83
Trim47-201ENSMUST00000021120 Hoxb7P09024 217 aa26.49■■□□□ 1.83
Trim47-201ENSMUST00000021120 P2rx7Q9Z1M0 595 aa26.49■■□□□ 1.83
Trim47-201ENSMUST00000021120 CemipQ8BI06 1361 aa26.48■■□□□ 1.83
Trim47-201ENSMUST00000021120 Ubr1O70481 1757 aa26.48■■□□□ 1.83
Trim47-201ENSMUST00000021120 Fyb1O35601 819 aa26.47■■□□□ 1.83
Trim47-201ENSMUST00000021120 GnpatP98192 678 aa26.47■■□□□ 1.83
Trim47-201ENSMUST00000021120 Dennd6aQ8BH65 605 aa26.46■■□□□ 1.83
Trim47-201ENSMUST00000021120 GsdmaQ9EST1 446 aa26.45■■□□□ 1.82
Trim47-201ENSMUST00000021120 Kiaa1107Q80TK0 1369 aa26.45■■□□□ 1.82
Trim47-201ENSMUST00000021120 Scn7aB1AYL1 1681 aa26.45■■□□□ 1.82
Trim47-201ENSMUST00000021120 Gm21190A0A0G2JGJ6 266 aa26.44■■□□□ 1.82
Trim47-201ENSMUST00000021120 NeflP08551 543 aa26.44■■□□□ 1.82
Trim47-201ENSMUST00000021120 Ttc41Q692V3 1318 aa26.42■■□□□ 1.82
Trim47-201ENSMUST00000021120 Map2P20357 1828 aa26.42■■□□□ 1.82
Trim47-201ENSMUST00000021120 Trim28Q62318 834 aa26.41■■□□□ 1.82
Trim47-201ENSMUST00000021120 Ipo4Q8VI75 1082 aa26.41■■□□□ 1.82
Trim47-201ENSMUST00000021120 Esx1O88933 382 aa26.41■■□□□ 1.82
Trim47-201ENSMUST00000021120 Nlgn1Q99K10 843 aa26.41■■□□□ 1.82
Trim47-201ENSMUST00000021120 TimelessQ9R1X4 1197 aa26.41■■□□□ 1.82
Trim47-201ENSMUST00000021120 DccP70211 1447 aa26.4■■□□□ 1.82
Trim47-201ENSMUST00000021120 Gimap6Q8K349 305 aa26.39■■□□□ 1.82
Trim47-201ENSMUST00000021120 Tsen2Q6P7W5 460 aa26.39■■□□□ 1.81
Trim47-201ENSMUST00000021120 Cabp4Q8VHC5 271 aa26.38■■□□□ 1.81
Trim47-201ENSMUST00000021120 FancaQ9JL70 1439 aa26.36■■□□□ 1.81
Trim47-201ENSMUST00000021120 Ppp1r15aP17564 657 aa26.36■■□□□ 1.81
Trim47-201ENSMUST00000021120 Ddx17Q501J6 650 aaKnown RBP26.35■■□□□ 1.81
Trim47-201ENSMUST00000021120 Mbd3Q9Z2D8 285 aaKnown RBP26.35■■□□□ 1.81
Trim47-201ENSMUST00000021120 U2af1Q9D883 239 aaKnown RBP26.35■■□□□ 1.81
Trim47-201ENSMUST00000021120 Uhrf1bp1lA2RSJ4 1457 aa26.35■■□□□ 1.81
Trim47-201ENSMUST00000021120 Ncapd2Q8K2Z4 1392 aa26.34■■□□□ 1.81
Trim47-201ENSMUST00000021120 Golga2Q921M4 999 aa26.34■■□□□ 1.81
Trim47-201ENSMUST00000021120 Ttll13A4Q9F6 804 aa26.33■■□□□ 1.81
Trim47-201ENSMUST00000021120 Nckap5lQ6GQX2 1323 aa26.33■■□□□ 1.81
Trim47-201ENSMUST00000021120 Ncoa4Q5U4H9 625 aa26.33■■□□□ 1.8
Trim47-201ENSMUST00000021120 Scaf1Q5U4C3 1256 aaKnown RBP26.32■■□□□ 1.8
Trim47-201ENSMUST00000021120 ChgaP26339 463 aaKnown RBP26.31■■□□□ 1.8
Trim47-201ENSMUST00000021120 Slc12a5Q91V14 1138 aa26.31■■□□□ 1.8
Trim47-201ENSMUST00000021120 Kif24Q6NWW5 1356 aa26.3■■□□□ 1.8
Trim47-201ENSMUST00000021120 Fam135bQ9DAI6 1403 aa26.28■■□□□ 1.8
Trim47-201ENSMUST00000021120 Nkx1-2P42580 305 aa26.28■■□□□ 1.8
Trim47-201ENSMUST00000021120 Siglec1Q62230 1695 aa26.28■■□□□ 1.8
Trim47-201ENSMUST00000021120 Dixdc1Q80Y83 711 aa26.27■■□□□ 1.8
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms