RNA–Protein interactions for RNA: YOR129C

AFI1, Transcript of Arf3p polarization-specific docking factor, yeastyeast

Gene AFI1, Length 2,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFI1YOR129C YLR307C-AQ3E825 87 aa1.22□□□□□ -2.21
AFI1YOR129C YHR213W-BQ8TGK1 99 aa1.22□□□□□ -2.21
AFI1YOR129C YJL133C-AQ3E7A3 74 aa1.21□□□□□ -2.22
AFI1YOR129C YGL258W-AQ3E740 77 aa1.2□□□□□ -2.22
AFI1YOR129C YLL006W-AQ3E814 58 aa1.2□□□□□ -2.22
AFI1YOR129C FLO1P32768 1537 aa1.19□□□□□ -2.22
AFI1YOR129C RPS27BP38711 82 aa1.18□□□□□ -2.22
AFI1YOR129C DDR2P89113 61 aa1.18□□□□□ -2.22
AFI1YOR129C YBL044WP38194 122 aa1.17□□□□□ -2.22
AFI1YOR129C RPL29P05747 59 aaPredicted RBP1.17□□□□□ -2.22
AFI1YOR129C RPL43AP0CX25 92 aaKnown RBP1.17□□□□□ -2.22
AFI1YOR129C RPL43BP0CX26 92 aa1.17□□□□□ -2.22
AFI1YOR129C YCR108CQ3E819 63 aa1.17□□□□□ -2.22
AFI1YOR129C YGR146C-AQ8TGT9 53 aa1.16□□□□□ -2.22
AFI1YOR129C YBR016WP38216 128 aa1.15□□□□□ -2.23
AFI1YOR129C HFA1P32874 2273 aa1.15□□□□□ -2.23
AFI1YOR129C RPL37BP51402 88 aaKnown RBP1.14□□□□□ -2.23
AFI1YOR129C SEN1Q00416 2231 aaKnown RBP1.14□□□□□ -2.23
AFI1YOR129C YJL127C-BQ3E828 52 aa1.13□□□□□ -2.23
AFI1YOR129C YOR316C-AQ3E806 69 aa1.11□□□□□ -2.23
AFI1YOR129C URA2P07259 2214 aaKnown RBP1.1□□□□□ -2.23
AFI1YOR129C YOL164W-AQ3E7A5 60 aa1.09□□□□□ -2.24
AFI1YOR129C PMP3P87284 55 aa1.08□□□□□ -2.24
AFI1YOR129C NCE101Q02820 53 aa1.08□□□□□ -2.24
AFI1YOR129C YOR072W-BQ3E832 53 aa1.06□□□□□ -2.24
AFI1YOR129C HOR7Q05827 59 aa1.06□□□□□ -2.24
AFI1YOR129C YLR157W-EP0CF00 54 aa1.05□□□□□ -2.24
AFI1YOR129C YDR524C-BQ3E6R4 66 aa1.05□□□□□ -2.24
AFI1YOR129C YHR073W-AP0C5N7 58 aa1.04□□□□□ -2.24
AFI1YOR129C RPL37AP49166 88 aaKnown RBP1.04□□□□□ -2.24
AFI1YOR129C YDR034C-AP0C289 58 aa1□□□□□ -2.25
AFI1YOR129C NUM1Q00402 2748 aa0.94□□□□□ -2.26
AFI1YOR129C RPS29BP41058 56 aaKnown RBP0.92□□□□□ -2.26
AFI1YOR129C YMR105W-AQ8TGS8 64 aa0.92□□□□□ -2.26
AFI1YOR129C YPR117WQ06116 2489 aa0.9□□□□□ -2.27
AFI1YOR129C TAO3P40468 2376 aa0.89□□□□□ -2.27
AFI1YOR129C RPL39P04650 51 aa0.88□□□□□ -2.27
AFI1YOR129C RPS29AP41057 56 aaKnown RBP0.86□□□□□ -2.27
AFI1YOR129C YML054C-AQ3E809 52 aa0.86□□□□□ -2.27
AFI1YOR129C YLL066W-BQ8TGJ7 56 aa0.82□□□□□ -2.28
AFI1YOR129C YHR050W-AQ05451 56 aa0.81□□□□□ -2.28
AFI1YOR129C Q0017Q9ZZX8 53 aa0.81□□□□□ -2.28
AFI1YOR129C MEC1P38111 2368 aa0.79□□□□□ -2.28
AFI1YOR129C TOR1P35169 2470 aa0.78□□□□□ -2.28
AFI1YOR129C PRP8P33334 2413 aaKnown RBP0.77□□□□□ -2.29
AFI1YOR129C YIL046W-AQ3E7Z4 54 aa0.76□□□□□ -2.29
AFI1YOR129C TRA1P38811 3744 aa0.68□□□□□ -2.3
AFI1YOR129C FMP27Q06179 2628 aa0.68□□□□□ -2.3
AFI1YOR129C GCN1P33892 2672 aaKnown RBP0.66□□□□□ -2.3
AFI1YOR129C UTP20P35194 2493 aaKnown RBP0.65□□□□□ -2.31
AFI1YOR129C CUP1-1P0CX80 61 aa0.65□□□□□ -2.31
AFI1YOR129C CUP1-2P0CX81 61 aa0.65□□□□□ -2.31
AFI1YOR129C CSF1Q12150 2958 aa0.64□□□□□ -2.31
AFI1YOR129C IRA2P19158 3079 aa0.64□□□□□ -2.31
AFI1YOR129C MDN1Q12019 4910 aaKnown RBP0.62□□□□□ -2.31
AFI1YOR129C IRA1P18963 3092 aa0.61□□□□□ -2.31
AFI1YOR129C TOR2P32600 2474 aaKnown RBP0.61□□□□□ -2.31
AFI1YOR129C DYN1P36022 4092 aa0.61□□□□□ -2.31
AFI1YOR129C VPS13Q07878 3144 aa0.57□□□□□ -2.32
AFI1YOR129C Q0297Q9ZZV8 51 aa0.53□□□□□ -2.32
AFI1YOR129C TEL1P38110 2787 aa0.51□□□□□ -2.33
AFI1YOR129C TOM1Q03280 3268 aa0.5□□□□□ -2.33
AFI1YOR129C YDR034W-BQ6Q5X2 51 aa0.24□□□□□ -2.37
Retrieved 63 of 5,963 RNA–protein pairs in 47.4 ms