RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeastyeast

Gene VAM10, Length 345 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM10YOR068C YHR213W-BQ8TGK1 99 aa1.81□□□□□ -2.12
VAM10YOR068C YGL258W-AQ3E740 77 aa1.8□□□□□ -2.12
VAM10YOR068C YJL133C-AQ3E7A3 74 aa1.8□□□□□ -2.12
VAM10YOR068C HFA1P32874 2273 aa1.79□□□□□ -2.12
VAM10YOR068C FLO1P32768 1537 aa1.78□□□□□ -2.12
VAM10YOR068C SEN1Q00416 2231 aaKnown RBP1.78□□□□□ -2.13
VAM10YOR068C RPS27BP38711 82 aa1.77□□□□□ -2.13
VAM10YOR068C YLL006W-AQ3E814 58 aa1.77□□□□□ -2.13
VAM10YOR068C RPL29P05747 59 aaPredicted RBP1.76□□□□□ -2.13
VAM10YOR068C DDR2P89113 61 aa1.76□□□□□ -2.13
VAM10YOR068C YCR108CQ3E819 63 aa1.75□□□□□ -2.13
VAM10YOR068C RPL43AP0CX25 92 aaKnown RBP1.74□□□□□ -2.13
VAM10YOR068C RPL43BP0CX26 92 aa1.74□□□□□ -2.13
VAM10YOR068C YGR146C-AQ8TGT9 53 aa1.74□□□□□ -2.13
VAM10YOR068C YBR016WP38216 128 aa1.73□□□□□ -2.13
VAM10YOR068C RPL37BP51402 88 aaKnown RBP1.73□□□□□ -2.13
VAM10YOR068C YBL044WP38194 122 aa1.72□□□□□ -2.13
VAM10YOR068C URA2P07259 2214 aaKnown RBP1.71□□□□□ -2.14
VAM10YOR068C YJL127C-BQ3E828 52 aa1.68□□□□□ -2.14
VAM10YOR068C YOR316C-AQ3E806 69 aa1.66□□□□□ -2.14
VAM10YOR068C NCE101Q02820 53 aa1.63□□□□□ -2.15
VAM10YOR068C PMP3P87284 55 aa1.6□□□□□ -2.15
VAM10YOR068C YOL164W-AQ3E7A5 60 aa1.6□□□□□ -2.15
VAM10YOR068C YDR524C-BQ3E6R4 66 aa1.58□□□□□ -2.16
VAM10YOR068C HOR7Q05827 59 aa1.57□□□□□ -2.16
VAM10YOR068C YHR073W-AP0C5N7 58 aa1.56□□□□□ -2.16
VAM10YOR068C YLR157W-EP0CF00 54 aa1.56□□□□□ -2.16
VAM10YOR068C RPL37AP49166 88 aaKnown RBP1.56□□□□□ -2.16
VAM10YOR068C YOR072W-BQ3E832 53 aa1.56□□□□□ -2.16
VAM10YOR068C YDR034C-AP0C289 58 aa1.49□□□□□ -2.17
VAM10YOR068C YMR105W-AQ8TGS8 64 aa1.38□□□□□ -2.19
VAM10YOR068C RPS29BP41058 56 aaKnown RBP1.37□□□□□ -2.19
VAM10YOR068C TAO3P40468 2376 aa1.35□□□□□ -2.19
VAM10YOR068C RPS29AP41057 56 aaKnown RBP1.3□□□□□ -2.2
VAM10YOR068C RPL39P04650 51 aa1.29□□□□□ -2.2
VAM10YOR068C YML054C-AQ3E809 52 aa1.26□□□□□ -2.21
VAM10YOR068C YLL066W-BQ8TGJ7 56 aa1.24□□□□□ -2.21
VAM10YOR068C MEC1P38111 2368 aa1.21□□□□□ -2.22
VAM10YOR068C Q0017Q9ZZX8 53 aa1.2□□□□□ -2.22
VAM10YOR068C YHR050W-AQ05451 56 aa1.18□□□□□ -2.22
VAM10YOR068C YIL046W-AQ3E7Z4 54 aa1.15□□□□□ -2.23
VAM10YOR068C PRP8P33334 2413 aaKnown RBP1.14□□□□□ -2.23
VAM10YOR068C TOR1P35169 2470 aa1.05□□□□□ -2.24
VAM10YOR068C TRA1P38811 3744 aa1.05□□□□□ -2.24
VAM10YOR068C CSF1Q12150 2958 aa0.96□□□□□ -2.26
VAM10YOR068C IRA2P19158 3079 aa0.96□□□□□ -2.26
VAM10YOR068C UTP20P35194 2493 aaKnown RBP0.95□□□□□ -2.26
VAM10YOR068C DYN1P36022 4092 aa0.91□□□□□ -2.26
VAM10YOR068C TOR2P32600 2474 aaKnown RBP0.89□□□□□ -2.27
VAM10YOR068C IRA1P18963 3092 aa0.87□□□□□ -2.27
VAM10YOR068C FMP27Q06179 2628 aa0.85□□□□□ -2.27
VAM10YOR068C VPS13Q07878 3144 aa0.85□□□□□ -2.27
VAM10YOR068C GCN1P33892 2672 aaKnown RBP0.83□□□□□ -2.28
VAM10YOR068C NUM1Q00402 2748 aa0.81□□□□□ -2.28
VAM10YOR068C CUP1-1P0CX80 61 aa0.78□□□□□ -2.28
VAM10YOR068C CUP1-2P0CX81 61 aa0.78□□□□□ -2.28
VAM10YOR068C Q0297Q9ZZV8 51 aa0.77□□□□□ -2.29
VAM10YOR068C YPR117WQ06116 2489 aa0.76□□□□□ -2.29
VAM10YOR068C TOM1Q03280 3268 aa0.76□□□□□ -2.29
VAM10YOR068C TEL1P38110 2787 aa0.73□□□□□ -2.29
VAM10YOR068C YBR056W-AI2HB52 66 aa0.37□□□□□ -2.35
VAM10YOR068C YDR034W-BQ6Q5X2 51 aa0.26□□□□□ -2.37
VAM10YOR068C MDN1Q12019 4910 aaKnown RBP0.24□□□□□ -2.37
Retrieved 63 of 5,963 RNA–protein pairs in 9.7 ms