RNA–Protein interactions for RNA: YNL093W

YPT53, Transcript of Stress-induced Rab family GTPase, yeastyeast

Gene YPT53, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT53YNL093W YHR213W-BQ8TGK1 99 aa2.19□□□□□ -2.06
YPT53YNL093W RPS27BP38711 82 aa2.17□□□□□ -2.06
YPT53YNL093W YJL133C-AQ3E7A3 74 aa2.17□□□□□ -2.06
YPT53YNL093W RPL43AP0CX25 92 aaKnown RBP2.16□□□□□ -2.06
YPT53YNL093W RPL43BP0CX26 92 aa2.16□□□□□ -2.06
YPT53YNL093W YGL258W-AQ3E740 77 aa2.16□□□□□ -2.06
YPT53YNL093W FAB1P34756 2278 aa2.15□□□□□ -2.06
YPT53YNL093W YLL006W-AQ3E814 58 aa2.15□□□□□ -2.07
YPT53YNL093W YCR108CQ3E819 63 aa2.13□□□□□ -2.07
YPT53YNL093W SEN1Q00416 2231 aaKnown RBP2.11□□□□□ -2.07
YPT53YNL093W RPL29P05747 59 aaPredicted RBP2.11□□□□□ -2.07
YPT53YNL093W DDR2P89113 61 aa2.11□□□□□ -2.07
YPT53YNL093W YBR016WP38216 128 aa2.1□□□□□ -2.07
YPT53YNL093W HFA1P32874 2273 aa2.09□□□□□ -2.07
YPT53YNL093W YGR146C-AQ8TGT9 53 aa2.09□□□□□ -2.07
YPT53YNL093W RPL37BP51402 88 aaKnown RBP2.08□□□□□ -2.08
YPT53YNL093W YBL044WP38194 122 aa2.07□□□□□ -2.08
YPT53YNL093W YJL127C-BQ3E828 52 aa2.01□□□□□ -2.09
YPT53YNL093W URA2P07259 2214 aaKnown RBP2.01□□□□□ -2.09
YPT53YNL093W YOR316C-AQ3E806 69 aa1.98□□□□□ -2.09
YPT53YNL093W NCE101Q02820 53 aa1.94□□□□□ -2.1
YPT53YNL093W YOL164W-AQ3E7A5 60 aa1.91□□□□□ -2.1
YPT53YNL093W PMP3P87284 55 aa1.9□□□□□ -2.11
YPT53YNL093W YHR073W-AP0C5N7 58 aa1.87□□□□□ -2.11
YPT53YNL093W YLR157W-EP0CF00 54 aa1.87□□□□□ -2.11
YPT53YNL093W RPL37AP49166 88 aaKnown RBP1.87□□□□□ -2.11
YPT53YNL093W HOR7Q05827 59 aa1.87□□□□□ -2.11
YPT53YNL093W YDR524C-BQ3E6R4 66 aa1.86□□□□□ -2.11
YPT53YNL093W YOR072W-BQ3E832 53 aa1.85□□□□□ -2.11
YPT53YNL093W YDR034C-AP0C289 58 aa1.76□□□□□ -2.13
YPT53YNL093W YMR105W-AQ8TGS8 64 aa1.67□□□□□ -2.14
YPT53YNL093W TAO3P40468 2376 aa1.63□□□□□ -2.15
YPT53YNL093W RPS29BP41058 56 aaKnown RBP1.61□□□□□ -2.15
YPT53YNL093W RPL39P04650 51 aa1.56□□□□□ -2.16
YPT53YNL093W RPS29AP41057 56 aaKnown RBP1.52□□□□□ -2.17
YPT53YNL093W YLL066W-BQ8TGJ7 56 aa1.5□□□□□ -2.17
YPT53YNL093W YML054C-AQ3E809 52 aa1.46□□□□□ -2.18
YPT53YNL093W MEC1P38111 2368 aa1.45□□□□□ -2.18
YPT53YNL093W YIL046W-AQ3E7Z4 54 aa1.41□□□□□ -2.18
YPT53YNL093W TRA1P38811 3744 aa1.4□□□□□ -2.18
YPT53YNL093W YHR050W-AQ05451 56 aa1.39□□□□□ -2.19
YPT53YNL093W Q0017Q9ZZX8 53 aa1.39□□□□□ -2.19
YPT53YNL093W PRP8P33334 2413 aaKnown RBP1.38□□□□□ -2.19
YPT53YNL093W IRA2P19158 3079 aa1.24□□□□□ -2.21
YPT53YNL093W DYN1P36022 4092 aa1.24□□□□□ -2.21
YPT53YNL093W CSF1Q12150 2958 aa1.23□□□□□ -2.21
YPT53YNL093W TOR1P35169 2470 aa1.22□□□□□ -2.21
YPT53YNL093W VPS13Q07878 3144 aa1.2□□□□□ -2.22
YPT53YNL093W IRA1P18963 3092 aa1.16□□□□□ -2.22
YPT53YNL093W UTP20P35194 2493 aaKnown RBP1.14□□□□□ -2.23
YPT53YNL093W GCN1P33892 2672 aaKnown RBP1.14□□□□□ -2.23
YPT53YNL093W TOM1Q03280 3268 aa1.1□□□□□ -2.23
YPT53YNL093W FMP27Q06179 2628 aa1.09□□□□□ -2.23
YPT53YNL093W TOR2P32600 2474 aaKnown RBP1.08□□□□□ -2.24
YPT53YNL093W NUM1Q00402 2748 aa1.06□□□□□ -2.24
YPT53YNL093W YPR117WQ06116 2489 aa0.98□□□□□ -2.25
YPT53YNL093W TEL1P38110 2787 aa0.96□□□□□ -2.26
YPT53YNL093W Q0297Q9ZZV8 51 aa0.92□□□□□ -2.26
YPT53YNL093W CUP1-1P0CX80 61 aa0.9□□□□□ -2.27
YPT53YNL093W CUP1-2P0CX81 61 aa0.9□□□□□ -2.27
YPT53YNL093W YDR034W-BQ6Q5X2 51 aa0.77□□□□□ -2.29
YPT53YNL093W YBR056W-AI2HB52 66 aa0.76□□□□□ -2.29
YPT53YNL093W MDN1Q12019 4910 aaKnown RBP0.55□□□□□ -2.32
Retrieved 63 of 5,963 RNA–protein pairs in 39.5 ms