RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W TOR1P35169 2470 aa0.43□□□□□ -2.34
TRM2YKR056W YPR117WQ06116 2489 aa0.43□□□□□ -2.34
TRM2YKR056W YPR010C-AA5Z2X5 72 aa0.42□□□□□ -2.34
TRM2YKR056W YLL006W-AQ3E814 58 aa0.4□□□□□ -2.34
TRM2YKR056W MDN1Q12019 4910 aaKnown RBP0.39□□□□□ -2.35
TRM2YKR056W NUP188P52593 1655 aaKnown RBP0.38□□□□□ -2.35
TRM2YKR056W RPS29AP41057 56 aaKnown RBP0.37□□□□□ -2.35
TRM2YKR056W SSK2P53599 1579 aa0.36□□□□□ -2.35
TRM2YKR056W USO1P25386 1790 aa0.36□□□□□ -2.35
TRM2YKR056W PEP1P32319 1579 aa0.35□□□□□ -2.35
TRM2YKR056W ULS1Q08562 1619 aa0.35□□□□□ -2.35
TRM2YKR056W YGL258W-AQ3E740 77 aa0.33□□□□□ -2.36
TRM2YKR056W NUP192P47054 1683 aa0.3□□□□□ -2.36
TRM2YKR056W YDR524C-BQ3E6R4 66 aa0.29□□□□□ -2.36
TRM2YKR056W YOR072W-BQ3E832 53 aa0.28□□□□□ -2.36
TRM2YKR056W COA2Q3E823 68 aa0.27□□□□□ -2.37
TRM2YKR056W GCN1P33892 2672 aaKnown RBP0.27□□□□□ -2.37
TRM2YKR056W BUD3P25558 1636 aa0.25□□□□□ -2.37
TRM2YKR056W FMP27Q06179 2628 aa0.25□□□□□ -2.37
TRM2YKR056W STU1P38198 1513 aa0.23□□□□□ -2.37
TRM2YKR056W RKR1Q04781 1562 aa0.22□□□□□ -2.37
TRM2YKR056W FIG2P25653 1609 aa0.2□□□□□ -2.38
TRM2YKR056W THO2P53552 1597 aaKnown RBP0.18□□□□□ -2.38
TRM2YKR056W TOR2P32600 2474 aaKnown RBP0.17□□□□□ -2.38
TRM2YKR056W HIR3P47171 1648 aa0.16□□□□□ -2.38
TRM2YKR056W NUP170P38181 1502 aa0.16□□□□□ -2.38
TRM2YKR056W YOR316C-AQ3E806 69 aa0.16□□□□□ -2.38
TRM2YKR056W TEL1P38110 2787 aa0.14□□□□□ -2.39
TRM2YKR056W ATG2P53855 1592 aa0.14□□□□□ -2.39
TRM2YKR056W YJL133C-AQ3E7A3 74 aa0.14□□□□□ -2.39
TRM2YKR056W YLR342W-AQ3E810 57 aa0.14□□□□□ -2.39
TRM2YKR056W MEC1P38111 2368 aa0.13□□□□□ -2.39
TRM2YKR056W GCN2P15442 1659 aa0.13□□□□□ -2.39
TRM2YKR056W YHR050W-AQ05451 56 aa0.1□□□□□ -2.39
TRM2YKR056W YDR034C-AP0C289 58 aa0.09□□□□□ -2.4
TRM2YKR056W DYN1P36022 4092 aa0.08□□□□□ -2.4
TRM2YKR056W DDR2P89113 61 aa0.07□□□□□ -2.4
TRM2YKR056W IRA1P18963 3092 aa0.07□□□□□ -2.4
TRM2YKR056W IRA2P19158 3079 aa0.06□□□□□ -2.4
TRM2YKR056W FLO1P32768 1537 aa0.06□□□□□ -2.4
TRM2YKR056W COX9P07255 59 aa0.06□□□□□ -2.4
TRM2YKR056W CHC1P22137 1653 aaKnown RBP0.04□□□□□ -2.4
TRM2YKR056W YDR034W-BQ6Q5X2 51 aa0.04□□□□□ -2.4
TRM2YKR056W TRA1P38811 3744 aa0.04□□□□□ -2.4
TRM2YKR056W RPL29P05747 59 aaPredicted RBP0.02□□□□□ -2.41
TRM2YKR056W VPS13Q07878 3144 aa0.02□□□□□ -2.41
TRM2YKR056W CSF1Q12150 2958 aa0.02□□□□□ -2.41
TRM2YKR056W TOM1Q03280 3268 aa0.01□□□□□ -2.41
TRM2YKR056W SMX2P40204 77 aaKnown RBP-0.01□□□□□ -2.41
TRM2YKR056W YJL127C-BQ3E828 52 aa-0.07□□□□□ -2.42
TRM2YKR056W Q0017Q9ZZX8 53 aa-0.07□□□□□ -2.42
TRM2YKR056W YHR073W-AP0C5N7 58 aa-0.09□□□□□ -2.42
TRM2YKR056W MLP2P40457 1679 aa-0.11□□□□□ -2.43
TRM2YKR056W YML054C-AQ3E809 52 aa-0.13□□□□□ -2.43
TRM2YKR056W TOM7P53507 60 aa-0.14□□□□□ -2.43
TRM2YKR056W YIL046W-AQ3E7Z4 54 aa-0.19□□□□□ -2.44
TRM2YKR056W Q0297Q9ZZV8 51 aa-0.26□□□□□ -2.45
TRM2YKR056W PMP3P87284 55 aa-0.3□□□□□ -2.46
TRM2YKR056W YMR105W-AQ8TGS8 64 aa-0.32□□□□□ -2.46
TRM2YKR056W HOR7Q05827 59 aa-0.38□□□□□ -2.47
TRM2YKR056W YLL066W-BQ8TGJ7 56 aa-0.52□□□□□ -2.49
TRM2YKR056W NCE101Q02820 53 aa-0.54□□□□□ -2.5
TRM2YKR056W RPL39P04650 51 aa-0.64□□□□□ -2.51
Retrieved 63 of 5,963 RNA–protein pairs in 20.3 ms