RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W SEC16P48415 2195 aaKnown RBP2.25□□□□□ -2.05
NSP1YJL041W RPL39P04650 51 aa2.25□□□□□ -2.05
NSP1YJL041W RPL37BP51402 88 aaKnown RBP2.25□□□□□ -2.05
NSP1YJL041W YOR316C-AQ3E806 69 aa2.24□□□□□ -2.05
NSP1YJL041W YJR085CP47131 105 aaKnown RBP2.23□□□□□ -2.05
NSP1YJL041W CMC4Q3E7A9 73 aa2.22□□□□□ -2.05
NSP1YJL041W LCL1Q02786 101 aa2.2□□□□□ -2.06
NSP1YJL041W BLM10P43583 2143 aa2.2□□□□□ -2.06
NSP1YJL041W YCL042WP25572 119 aa2.17□□□□□ -2.06
NSP1YJL041W YJL144WP47009 104 aa2.17□□□□□ -2.06
NSP1YJL041W YBR072C-AQ3E794 53 aa2.17□□□□□ -2.06
NSP1YJL041W YAL067W-AQ8TGK6 75 aa2.16□□□□□ -2.06
NSP1YJL041W RPL43AP0CX25 92 aaKnown RBP2.15□□□□□ -2.06
NSP1YJL041W RPL43BP0CX26 92 aa2.15□□□□□ -2.06
NSP1YJL041W CUP1-1P0CX80 61 aa2.15□□□□□ -2.07
NSP1YJL041W CUP1-2P0CX81 61 aa2.15□□□□□ -2.07
NSP1YJL041W YJR128WP47162 119 aa2.15□□□□□ -2.07
NSP1YJL041W GIS2P53849 153 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
NSP1YJL041W YBR016WP38216 128 aa2.13□□□□□ -2.07
NSP1YJL041W TAR1Q8TGM6 124 aa2.13□□□□□ -2.07
NSP1YJL041W SEN1Q00416 2231 aaKnown RBP2.11□□□□□ -2.07
NSP1YJL041W BRR2P32639 2163 aaKnown RBP2.1□□□□□ -2.07
NSP1YJL041W POL2P21951 2222 aaKnown RBP2.08□□□□□ -2.08
NSP1YJL041W YLL066W-BQ8TGJ7 56 aa2.08□□□□□ -2.08
NSP1YJL041W YCR108CQ3E819 63 aa2.07□□□□□ -2.08
NSP1YJL041W YBL044WP38194 122 aa2.06□□□□□ -2.08
NSP1YJL041W ACC1Q00955 2233 aaKnown RBP2.05□□□□□ -2.08
NSP1YJL041W BPH1P25356 2167 aa2.04□□□□□ -2.08
NSP1YJL041W RPL37AP49166 88 aaKnown RBP2.04□□□□□ -2.08
NSP1YJL041W YOR072W-BQ3E832 53 aa2.04□□□□□ -2.08
NSP1YJL041W FAB1P34756 2278 aa2.02□□□□□ -2.09
NSP1YJL041W YHR212W-AP0CX91 67 aa2.01□□□□□ -2.09
NSP1YJL041W HHY1P39982 102 aa2.01□□□□□ -2.09
NSP1YJL041W YDR034C-AP0C289 58 aa2□□□□□ -2.09
NSP1YJL041W GCN1P33892 2672 aaKnown RBP1.96□□□□□ -2.1
NSP1YJL041W PRP8P33334 2413 aaKnown RBP1.95□□□□□ -2.1
NSP1YJL041W TAO3P40468 2376 aa1.94□□□□□ -2.1
NSP1YJL041W UTP20P35194 2493 aaKnown RBP1.92□□□□□ -2.1
NSP1YJL041W URA2P07259 2214 aaKnown RBP1.9□□□□□ -2.1
NSP1YJL041W YML054C-AQ3E809 52 aa1.9□□□□□ -2.11
NSP1YJL041W Q0297Q9ZZV8 51 aa1.9□□□□□ -2.11
NSP1YJL041W TOM1Q03280 3268 aa1.87□□□□□ -2.11
NSP1YJL041W TOR2P32600 2474 aaKnown RBP1.83□□□□□ -2.12
NSP1YJL041W TEL1P38110 2787 aa1.82□□□□□ -2.12
NSP1YJL041W Q0017Q9ZZX8 53 aa1.81□□□□□ -2.12
NSP1YJL041W HFA1P32874 2273 aa1.81□□□□□ -2.12
NSP1YJL041W FMP27Q06179 2628 aa1.8□□□□□ -2.12
NSP1YJL041W YHR086W-AQ3E746 53 aa1.75□□□□□ -2.13
NSP1YJL041W YDR034W-BQ6Q5X2 51 aa1.68□□□□□ -2.14
NSP1YJL041W YOL164W-AQ3E7A5 60 aa1.67□□□□□ -2.14
NSP1YJL041W VPS13Q07878 3144 aa1.66□□□□□ -2.14
NSP1YJL041W RPS29AP41057 56 aaKnown RBP1.65□□□□□ -2.14
NSP1YJL041W YHR050W-AQ05451 56 aa1.63□□□□□ -2.15
NSP1YJL041W MDN1Q12019 4910 aaKnown RBP1.6□□□□□ -2.15
NSP1YJL041W DYN1P36022 4092 aa1.6□□□□□ -2.15
NSP1YJL041W IRA2P19158 3079 aa1.59□□□□□ -2.16
NSP1YJL041W YLR157W-EP0CF00 54 aa1.56□□□□□ -2.16
NSP1YJL041W CSF1Q12150 2958 aa1.55□□□□□ -2.16
NSP1YJL041W MEC1P38111 2368 aa1.54□□□□□ -2.16
NSP1YJL041W RPS29BP41058 56 aaKnown RBP1.52□□□□□ -2.17
NSP1YJL041W TRA1P38811 3744 aa1.52□□□□□ -2.17
NSP1YJL041W IRA1P18963 3092 aa1.5□□□□□ -2.17
NSP1YJL041W YBR056W-AI2HB52 66 aa1.48□□□□□ -2.17
Retrieved 63 of 5,963 RNA–protein pairs in 63.5 ms