RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A YCR108CQ3E819 63 aa0.99□□□□□ -2.25
EFG1YGR271C-A TOS6P48560 102 aa0.98□□□□□ -2.25
EFG1YGR271C-A NUP170P38181 1502 aa0.97□□□□□ -2.25
EFG1YGR271C-A BUD3P25558 1636 aa0.97□□□□□ -2.25
EFG1YGR271C-A HIR3P47171 1648 aa0.95□□□□□ -2.26
EFG1YGR271C-A PRP8P33334 2413 aaKnown RBP0.94□□□□□ -2.26
EFG1YGR271C-A SEN1Q00416 2231 aaKnown RBP0.91□□□□□ -2.26
EFG1YGR271C-A COA2Q3E823 68 aa0.9□□□□□ -2.27
EFG1YGR271C-A SMX2P40204 77 aaKnown RBP0.86□□□□□ -2.27
EFG1YGR271C-A YDR524C-BQ3E6R4 66 aa0.86□□□□□ -2.27
EFG1YGR271C-A YLL006W-AQ3E814 58 aa0.86□□□□□ -2.27
EFG1YGR271C-A ATG2P53855 1592 aa0.85□□□□□ -2.27
EFG1YGR271C-A FIG2P25653 1609 aa0.85□□□□□ -2.27
EFG1YGR271C-A YGL258W-AQ3E740 77 aa0.83□□□□□ -2.28
EFG1YGR271C-A YOR072W-BQ3E832 53 aa0.83□□□□□ -2.28
EFG1YGR271C-A MLP2P40457 1679 aa0.81□□□□□ -2.28
EFG1YGR271C-A CHC1P22137 1653 aaKnown RBP0.79□□□□□ -2.28
EFG1YGR271C-A COX9P07255 59 aa0.79□□□□□ -2.28
EFG1YGR271C-A RPS29AP41057 56 aaKnown RBP0.79□□□□□ -2.28
EFG1YGR271C-A YLR342W-AQ3E810 57 aa0.79□□□□□ -2.28
EFG1YGR271C-A YJL133C-AQ3E7A3 74 aa0.77□□□□□ -2.29
EFG1YGR271C-A GCN2P15442 1659 aa0.76□□□□□ -2.29
EFG1YGR271C-A YOR316C-AQ3E806 69 aa0.75□□□□□ -2.29
EFG1YGR271C-A DDR2P89113 61 aa0.74□□□□□ -2.29
EFG1YGR271C-A TAO3P40468 2376 aa0.69□□□□□ -2.3
EFG1YGR271C-A FLO1P32768 1537 aa0.64□□□□□ -2.31
EFG1YGR271C-A YDR034C-AP0C289 58 aa0.63□□□□□ -2.31
EFG1YGR271C-A YJL127C-BQ3E828 52 aa0.59□□□□□ -2.31
EFG1YGR271C-A RPL29P05747 59 aaPredicted RBP0.58□□□□□ -2.32
EFG1YGR271C-A YHR050W-AQ05451 56 aa0.57□□□□□ -2.32
EFG1YGR271C-A YHR073W-AP0C5N7 58 aa0.55□□□□□ -2.32
EFG1YGR271C-A TOM7P53507 60 aa0.55□□□□□ -2.32
EFG1YGR271C-A UTP20P35194 2493 aaKnown RBP0.51□□□□□ -2.33
EFG1YGR271C-A TOR1P35169 2470 aa0.48□□□□□ -2.33
EFG1YGR271C-A YML054C-AQ3E809 52 aa0.45□□□□□ -2.34
EFG1YGR271C-A Q0017Q9ZZX8 53 aa0.44□□□□□ -2.34
EFG1YGR271C-A PMP3P87284 55 aa0.42□□□□□ -2.34
EFG1YGR271C-A HOR7Q05827 59 aa0.36□□□□□ -2.35
EFG1YGR271C-A TOR2P32600 2474 aaKnown RBP0.28□□□□□ -2.36
EFG1YGR271C-A DYN1P36022 4092 aa0.27□□□□□ -2.37
EFG1YGR271C-A FMP27Q06179 2628 aa0.25□□□□□ -2.37
EFG1YGR271C-A NCE101Q02820 53 aa0.21□□□□□ -2.38
EFG1YGR271C-A MEC1P38111 2368 aa0.2□□□□□ -2.38
EFG1YGR271C-A YPR117WQ06116 2489 aa0.19□□□□□ -2.38
EFG1YGR271C-A TRA1P38811 3744 aa0.11□□□□□ -2.39
EFG1YGR271C-A YMR105W-AQ8TGS8 64 aa0.1□□□□□ -2.39
EFG1YGR271C-A GCN1P33892 2672 aaKnown RBP0.09□□□□□ -2.4
EFG1YGR271C-A TEL1P38110 2787 aa0.06□□□□□ -2.4
EFG1YGR271C-A CSF1Q12150 2958 aa0.05□□□□□ -2.4
EFG1YGR271C-A CUP1-1P0CX80 61 aa0.04□□□□□ -2.4
EFG1YGR271C-A CUP1-2P0CX81 61 aa0.04□□□□□ -2.4
EFG1YGR271C-A YLL066W-BQ8TGJ7 56 aa0.01□□□□□ -2.41
EFG1YGR271C-A IRA1P18963 3092 aa0.01□□□□□ -2.41
EFG1YGR271C-A NUM1Q00402 2748 aa-0.16□□□□□ -2.43
EFG1YGR271C-A IRA2P19158 3079 aa-0.16□□□□□ -2.44
EFG1YGR271C-A RPL39P04650 51 aa-0.18□□□□□ -2.44
EFG1YGR271C-A MDN1Q12019 4910 aaKnown RBP-0.19□□□□□ -2.44
EFG1YGR271C-A VPS13Q07878 3144 aa-0.23□□□□□ -2.45
EFG1YGR271C-A YIL046W-AQ3E7Z4 54 aa-0.51□□□□□ -2.49
EFG1YGR271C-A YBR056W-AI2HB52 66 aa-0.66□□□□□ -2.52
EFG1YGR271C-A TOM1Q03280 3268 aa-0.68□□□□□ -2.52
EFG1YGR271C-A Q0297Q9ZZV8 51 aa-0.73□□□□□ -2.53
EFG1YGR271C-A YDR034W-BQ6Q5X2 51 aa-1.65□□□□□ -2.67
Retrieved 63 of 5,963 RNA–protein pairs in 63 ms