RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W YBR230W-AQ3E762 66 aa0.73□□□□□ -2.29
CBF2YGR140W URA2P07259 2214 aaKnown RBP0.73□□□□□ -2.29
CBF2YGR140W YLR157W-DP0CE99 70 aa0.72□□□□□ -2.29
CBF2YGR140W CUP1-1P0CX80 61 aa0.71□□□□□ -2.3
CBF2YGR140W CUP1-2P0CX81 61 aa0.71□□□□□ -2.3
CBF2YGR140W YOR008C-AQ3E7B9 74 aa0.67□□□□□ -2.3
CBF2YGR140W SIP18P50263 79 aa0.67□□□□□ -2.3
CBF2YGR140W DYN1P36022 4092 aa0.66□□□□□ -2.3
CBF2YGR140W RPS27BP38711 82 aa0.66□□□□□ -2.3
CBF2YGR140W YCR108CQ3E819 63 aa0.63□□□□□ -2.31
CBF2YGR140W YDR034W-BQ6Q5X2 51 aa0.62□□□□□ -2.31
CBF2YGR140W SMX2P40204 77 aaKnown RBP0.62□□□□□ -2.31
CBF2YGR140W TOS6P48560 102 aa0.62□□□□□ -2.31
CBF2YGR140W YOR192C-CQ3E736 78 aa0.62□□□□□ -2.31
CBF2YGR140W BPH1P25356 2167 aa0.61□□□□□ -2.31
CBF2YGR140W YGR146C-AQ8TGT9 53 aa0.6□□□□□ -2.31
CBF2YGR140W MDN1Q12019 4910 aaKnown RBP0.6□□□□□ -2.31
CBF2YGR140W COX9P07255 59 aa0.6□□□□□ -2.31
CBF2YGR140W YDR524C-BQ3E6R4 66 aa0.59□□□□□ -2.32
CBF2YGR140W COA2Q3E823 68 aa0.59□□□□□ -2.32
CBF2YGR140W YPR010C-AA5Z2X5 72 aa0.57□□□□□ -2.32
CBF2YGR140W RPS29AP41057 56 aaKnown RBP0.57□□□□□ -2.32
CBF2YGR140W YLR342W-AQ3E810 57 aa0.53□□□□□ -2.32
CBF2YGR140W RPL29P05747 59 aaPredicted RBP0.53□□□□□ -2.32
CBF2YGR140W DDR2P89113 61 aa0.51□□□□□ -2.33
CBF2YGR140W YGL258W-AQ3E740 77 aa0.51□□□□□ -2.33
CBF2YGR140W PRP8P33334 2413 aaKnown RBP0.5□□□□□ -2.33
CBF2YGR140W HOR7Q05827 59 aa0.5□□□□□ -2.33
CBF2YGR140W YIL046W-AQ3E7Z4 54 aa0.49□□□□□ -2.33
CBF2YGR140W YOR072W-BQ3E832 53 aa0.49□□□□□ -2.33
CBF2YGR140W YHR073W-AP0C5N7 58 aa0.47□□□□□ -2.33
CBF2YGR140W YOR316C-AQ3E806 69 aa0.47□□□□□ -2.33
CBF2YGR140W YLL006W-AQ3E814 58 aa0.46□□□□□ -2.34
CBF2YGR140W PMP3P87284 55 aa0.45□□□□□ -2.34
CBF2YGR140W SEN1Q00416 2231 aaKnown RBP0.45□□□□□ -2.34
CBF2YGR140W YJL133C-AQ3E7A3 74 aa0.44□□□□□ -2.34
CBF2YGR140W YJL127C-BQ3E828 52 aa0.43□□□□□ -2.34
CBF2YGR140W NCE101Q02820 53 aa0.43□□□□□ -2.34
CBF2YGR140W TOM7P53507 60 aa0.41□□□□□ -2.34
CBF2YGR140W YPR117WQ06116 2489 aa0.41□□□□□ -2.34
CBF2YGR140W YML054C-AQ3E809 52 aa0.4□□□□□ -2.35
CBF2YGR140W NUM1Q00402 2748 aa0.39□□□□□ -2.35
CBF2YGR140W YDR034C-AP0C289 58 aa0.39□□□□□ -2.35
CBF2YGR140W Q0297Q9ZZV8 51 aa0.38□□□□□ -2.35
CBF2YGR140W TEL1P38110 2787 aa0.38□□□□□ -2.35
CBF2YGR140W Q0017Q9ZZX8 53 aa0.37□□□□□ -2.35
CBF2YGR140W YMR105W-AQ8TGS8 64 aa0.36□□□□□ -2.35
CBF2YGR140W YHR050W-AQ05451 56 aa0.36□□□□□ -2.35
CBF2YGR140W YLL066W-BQ8TGJ7 56 aa0.35□□□□□ -2.35
CBF2YGR140W TAO3P40468 2376 aa0.33□□□□□ -2.36
CBF2YGR140W TOR1P35169 2470 aa0.3□□□□□ -2.36
CBF2YGR140W RPL39P04650 51 aa0.28□□□□□ -2.36
CBF2YGR140W GCN1P33892 2672 aaKnown RBP0.27□□□□□ -2.37
CBF2YGR140W FMP27Q06179 2628 aa0.25□□□□□ -2.37
CBF2YGR140W IRA1P18963 3092 aa0.22□□□□□ -2.37
CBF2YGR140W TOR2P32600 2474 aaKnown RBP0.15□□□□□ -2.38
CBF2YGR140W UTP20P35194 2493 aaKnown RBP0.15□□□□□ -2.39
CBF2YGR140W TRA1P38811 3744 aa0.11□□□□□ -2.39
CBF2YGR140W VPS13Q07878 3144 aa0.09□□□□□ -2.39
CBF2YGR140W TOM1Q03280 3268 aa0.09□□□□□ -2.4
CBF2YGR140W MEC1P38111 2368 aa0.08□□□□□ -2.4
CBF2YGR140W CSF1Q12150 2958 aa0.07□□□□□ -2.4
CBF2YGR140W IRA2P19158 3079 aa0.03□□□□□ -2.4
Retrieved 63 of 5,963 RNA–protein pairs in 119 ms