RNA–Protein interactions for RNA: YBL050W

SEC17, Transcript of Alpha-SNAP cochaperone, yeastyeast

Gene SEC17, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC17YBL050W YLR342W-AQ3E810 57 aa2.81□□□□□ -1.96
SEC17YBL050W YLR307C-AQ3E825 87 aa2.79□□□□□ -1.96
SEC17YBL050W RPS27BP38711 82 aa2.78□□□□□ -1.96
SEC17YBL050W RPL43AP0CX25 92 aaKnown RBP2.77□□□□□ -1.97
SEC17YBL050W RPL43BP0CX26 92 aa2.77□□□□□ -1.97
SEC17YBL050W SEN1Q00416 2231 aaKnown RBP2.76□□□□□ -1.97
SEC17YBL050W YBL044WP38194 122 aa2.74□□□□□ -1.97
SEC17YBL050W YGR146C-AQ8TGT9 53 aa2.74□□□□□ -1.97
SEC17YBL050W YJL133C-AQ3E7A3 74 aa2.73□□□□□ -1.97
SEC17YBL050W YCR108CQ3E819 63 aa2.73□□□□□ -1.97
SEC17YBL050W YBR016WP38216 128 aa2.71□□□□□ -1.98
SEC17YBL050W TOM7P53507 60 aa2.7□□□□□ -1.98
SEC17YBL050W YOL164W-AQ3E7A5 60 aa2.69□□□□□ -1.98
SEC17YBL050W DDR2P89113 61 aa2.66□□□□□ -1.98
SEC17YBL050W RPL37BP51402 88 aaKnown RBP2.65□□□□□ -1.99
SEC17YBL050W YLR157W-EP0CF00 54 aa2.64□□□□□ -1.99
SEC17YBL050W YLL006W-AQ3E814 58 aa2.64□□□□□ -1.99
SEC17YBL050W RPL29P05747 59 aaPredicted RBP2.58□□□□□ -2
SEC17YBL050W YGL258W-AQ3E740 77 aa2.56□□□□□ -2
SEC17YBL050W RPL37AP49166 88 aaKnown RBP2.55□□□□□ -2
SEC17YBL050W YOR316C-AQ3E806 69 aa2.53□□□□□ -2
SEC17YBL050W YJL127C-BQ3E828 52 aa2.5□□□□□ -2.01
SEC17YBL050W YDR524C-BQ3E6R4 66 aa2.47□□□□□ -2.01
SEC17YBL050W FLO1P32768 1537 aa2.46□□□□□ -2.02
SEC17YBL050W YOR072W-BQ3E832 53 aa2.45□□□□□ -2.02
SEC17YBL050W YHR073W-AP0C5N7 58 aa2.32□□□□□ -2.04
SEC17YBL050W RPS29BP41058 56 aaKnown RBP2.31□□□□□ -2.04
SEC17YBL050W PMP3P87284 55 aa2.31□□□□□ -2.04
SEC17YBL050W HOR7Q05827 59 aa2.27□□□□□ -2.05
SEC17YBL050W YDR034C-AP0C289 58 aa2.25□□□□□ -2.05
SEC17YBL050W NCE101Q02820 53 aa2.25□□□□□ -2.05
SEC17YBL050W TAO3P40468 2376 aa2.22□□□□□ -2.05
SEC17YBL050W PRP8P33334 2413 aaKnown RBP2.09□□□□□ -2.07
SEC17YBL050W RPS29AP41057 56 aaKnown RBP2.06□□□□□ -2.08
SEC17YBL050W YML054C-AQ3E809 52 aa1.91□□□□□ -2.1
SEC17YBL050W YHR050W-AQ05451 56 aa1.85□□□□□ -2.11
SEC17YBL050W MEC1P38111 2368 aa1.84□□□□□ -2.11
SEC17YBL050W YMR105W-AQ8TGS8 64 aa1.81□□□□□ -2.12
SEC17YBL050W Q0017Q9ZZX8 53 aa1.81□□□□□ -2.12
SEC17YBL050W TOR1P35169 2470 aa1.79□□□□□ -2.12
SEC17YBL050W UTP20P35194 2493 aaKnown RBP1.72□□□□□ -2.13
SEC17YBL050W RPL39P04650 51 aa1.66□□□□□ -2.14
SEC17YBL050W YLL066W-BQ8TGJ7 56 aa1.63□□□□□ -2.15
SEC17YBL050W TRA1P38811 3744 aa1.55□□□□□ -2.16
SEC17YBL050W TOR2P32600 2474 aaKnown RBP1.48□□□□□ -2.17
SEC17YBL050W DYN1P36022 4092 aa1.46□□□□□ -2.18
SEC17YBL050W CSF1Q12150 2958 aa1.44□□□□□ -2.18
SEC17YBL050W GCN1P33892 2672 aaKnown RBP1.35□□□□□ -2.19
SEC17YBL050W FMP27Q06179 2628 aa1.35□□□□□ -2.19
SEC17YBL050W IRA1P18963 3092 aa1.32□□□□□ -2.2
SEC17YBL050W YIL046W-AQ3E7Z4 54 aa1.32□□□□□ -2.2
SEC17YBL050W YPR117WQ06116 2489 aa1.3□□□□□ -2.2
SEC17YBL050W IRA2P19158 3079 aa1.22□□□□□ -2.21
SEC17YBL050W NUM1Q00402 2748 aa1.21□□□□□ -2.22
SEC17YBL050W TEL1P38110 2787 aa1.16□□□□□ -2.22
SEC17YBL050W VPS13Q07878 3144 aa1.14□□□□□ -2.23
SEC17YBL050W CUP1-1P0CX80 61 aa1.06□□□□□ -2.24
SEC17YBL050W CUP1-2P0CX81 61 aa1.06□□□□□ -2.24
SEC17YBL050W TOM1Q03280 3268 aa0.8□□□□□ -2.28
SEC17YBL050W Q0297Q9ZZV8 51 aa0.76□□□□□ -2.29
SEC17YBL050W MDN1Q12019 4910 aaKnown RBP0.49□□□□□ -2.33
SEC17YBL050W YBR056W-AI2HB52 66 aa0.29□□□□□ -2.36
SEC17YBL050W YDR034W-BQ6Q5X2 51 aa-0.07□□□□□ -2.42
Retrieved 63 of 5,963 RNA–protein pairs in 36 ms