RNA–Protein interactions for RNA: ENST00000581250.5

PPP4R1-219, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-219ENST00000581250 TCF3P15923 654 aa12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 GJA4P35212 333 aa12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 TUBP50607 506 aa12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 MLLT6P55198 1093 aaPredicted RBP12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 SLC8A3P57103 927 aa12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 CSTF1Q05048 431 aaKnown RBP12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 PDE4CQ08493 712 aa12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 BST2Q10589 180 aaKnown RBP12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 LRRC32Q14392 662 aa12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 GAS6Q14393 721 aa12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 C10orf120Q5SQS8 335 aa12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 SNX30Q5VWJ9 437 aa12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 GJB7Q6PEY0 223 aa12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 TSSK4Q6SA08 328 aa12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 PIGZQ86VD9 579 aa12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 ANKRD52Q8NB46 1076 aa12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 UBA3Q8TBC4 463 aa12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 TFAP2BQ92481 460 aa12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 HESX1Q9UBX0 185 aa12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 DACH1Q9UI36 760 aa12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 FANCMQ8IYD8 2048 aa12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 KIAA1549LQ6ZVL6 1849 aa12.53□□□□□ -0.4
PPP4R1-219ENST00000581250 M0QYV0 167 aa12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 RNF225M0QZC1 329 aaPredicted RBP12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 PES1O00541 588 aaKnown RBP12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 PAEPP09466 180 aa12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 VDRP11473 427 aa12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 RARGP13631 454 aa12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 SLC9A1P19634 815 aa12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 TKTL1P51854 596 aa12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 GCNT1Q02742 428 aa12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 ADIGQ0VDE8 80 aa12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 CCINQ13939 588 aa12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 FSTL4Q6MZW2 842 aa12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 C1orf228Q6PIY5 440 aa12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 TRIM65Q6PJ69 517 aa12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 CCDC186Q7Z3E2 898 aa12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 SCD5Q86SK9 330 aa12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 DDX42Q86XP3 938 aaKnown RBP eCLIP12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 NDRG1Q92597 394 aaKnown RBP12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 ZSWIM1Q9BR11 485 aa12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 ULBP1Q9BZM6 244 aa12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 THAP9Q9H5L6 903 aa12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 FBRSL1Q9HCM7 1045 aaKnown RBP12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 UBE2TQ9NPD8 197 aaPredicted RBP12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 C2orf42Q9NWW7 574 aa12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 SH3BP1Q9Y3L3 701 aa12.52□□□□□ -0.41
PPP4R1-219ENST00000581250 FRYLO94915 3013 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 PIK3R2O00459 728 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 XPO1O14980 1071 aaKnown RBP12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 EGFP01133 1207 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 PRKCSHP14314 528 aaPredicted RBP12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 ERCC5P28715 1186 aaPredicted RBP12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 HOXD11P31277 338 aaPredicted RBP12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 NBL1P41271 181 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 RGS7P49802 495 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 ZNF132P52740 706 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 SATB1Q01826 763 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 GRSF1Q12849 480 aaKnown RBP eCLIP12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 NR1H3Q13133 447 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 MAN2A1Q16706 1144 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 ARHGAP44Q17R89 818 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 EXOC3L4Q17RC7 722 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 TMEM196Q5HYL7 178 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 PKN3Q6P5Z2 889 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 GBP6Q6ZN66 633 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 MIB1Q86YT6 1006 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 FAM114A1Q8IWE2 563 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 BBS7Q8IWZ6 715 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 P2RY13Q9BPV8 354 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 LRRC4Q9HBW1 653 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 CYLDQ9NQC7 956 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 PRMT8Q9NR22 394 aaPredicted RBP12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 SAMSN1Q9NSI8 373 aaKnown RBP12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 USP3Q9Y6I4 520 aa12.51□□□□□ -0.41
PPP4R1-219ENST00000581250 E2F8A0AVK6 867 aa12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 KCNJ18B7U540 433 aa12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 TRDMT1O14717 391 aaKnown RBP12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 SLC9A3R1O14745 358 aaPredicted RBP12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 GFRA3O60609 400 aa12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 RNF40O75150 1001 aa12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 ZBED1O96006 694 aa12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 SETSIPP0DME0 302 aa12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 RALAP11233 206 aa12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 LCP1P13796 627 aa12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 HOXC13P31276 330 aa12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 ATP5C1P36542 298 aaKnown RBP12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 USP8P40818 1118 aa12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 GALK1P51570 392 aa12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 AMPD2Q01433 879 aa12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 KDSRQ06136 332 aa12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 EFEMP1Q12805 493 aa12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 KCNJ12Q14500 433 aa12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 DHCR24Q15392 516 aa12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 GAB4Q2WGN9 574 aa12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 RAB41Q5JT25 222 aa12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 DGKKQ5KSL6 1271 aa12.5□□□□□ -0.41
PPP4R1-219ENST00000581250 LCLAT1Q6UWP7 414 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms