RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W NIT1P40447 199 aa6.73□□□□□ -1.33
SSO1YPL232W SPR3P41901 512 aa6.73□□□□□ -1.33
SSO1YPL232W ULP1Q02724 621 aa6.72□□□□□ -1.33
SSO1YPL232W FCP1Q03254 732 aa6.72□□□□□ -1.33
SSO1YPL232W POL5P39985 1022 aaKnown RBP6.71□□□□□ -1.34
SSO1YPL232W RRP46P53256 223 aaPredicted RBP6.71□□□□□ -1.34
SSO1YPL232W PKH1Q03407 766 aa6.71□□□□□ -1.34
SSO1YPL232W SAC3P46674 1301 aa6.71□□□□□ -1.34
SSO1YPL232W ARG82P07250 355 aa6.7□□□□□ -1.34
SSO1YPL232W RPS7AP26786 190 aaKnown RBP6.7□□□□□ -1.34
SSO1YPL232W YJL171CP46992 396 aa6.7□□□□□ -1.34
SSO1YPL232W EAR1Q03212 550 aa6.7□□□□□ -1.34
SSO1YPL232W TOS4Q06266 489 aa6.7□□□□□ -1.34
SSO1YPL232W ACK1Q07622 623 aaPredicted RBP6.7□□□□□ -1.34
SSO1YPL232W COQ4O13525 335 aa6.69□□□□□ -1.34
SSO1YPL232W OXP1P28273 1286 aa6.69□□□□□ -1.34
SSO1YPL232W MGM1P32266 881 aa6.69□□□□□ -1.34
SSO1YPL232W PSF2P40359 213 aa6.69□□□□□ -1.34
SSO1YPL232W EPS1P40557 701 aa6.69□□□□□ -1.34
SSO1YPL232W GIN4Q12263 1142 aa6.69□□□□□ -1.34
SSO1YPL232W VPS62P53285 467 aa6.68□□□□□ -1.34
SSO1YPL232W THI3Q07471 609 aa6.68□□□□□ -1.34
SSO1YPL232W PPM2Q08282 695 aa6.68□□□□□ -1.34
SSO1YPL232W BMS1Q08965 1183 aaKnown RBP6.68□□□□□ -1.34
SSO1YPL232W SWI1P09547 1314 aa6.68□□□□□ -1.34
SSO1YPL232W LCB1P25045 558 aaKnown RBP6.67□□□□□ -1.34
SSO1YPL232W ZDS1P50111 915 aaKnown RBP6.67□□□□□ -1.34
SSO1YPL232W IRC4Q03036 179 aa6.67□□□□□ -1.34
SSO1YPL232W YMR084WA2P2R3 262 aa6.66□□□□□ -1.34
SSO1YPL232W PFK2P16862 959 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
SSO1YPL232W NGR1P32831 672 aaKnown RBP6.66□□□□□ -1.34
SSO1YPL232W LDH1P38139 375 aa6.66□□□□□ -1.34
SSO1YPL232W ERG7P38604 731 aa6.66□□□□□ -1.34
SSO1YPL232W MAM1P40065 302 aa6.66□□□□□ -1.34
SSO1YPL232W YJR008WP47085 338 aa6.66□□□□□ -1.34
SSO1YPL232W DNM1P54861 757 aa6.66□□□□□ -1.34
SSO1YPL232W PEX29Q03370 554 aa6.66□□□□□ -1.34
SSO1YPL232W ECM30Q06673 1274 aa6.66□□□□□ -1.34
SSO1YPL232W YOL057WQ08225 711 aa6.66□□□□□ -1.34
SSO1YPL232W WRS1Q12109 432 aaKnown RBP6.66□□□□□ -1.34
SSO1YPL232W ADR1P07248 1323 aa6.66□□□□□ -1.34
SSO1YPL232W FIR1P40020 876 aa6.65□□□□□ -1.34
SSO1YPL232W WHI3P34761 661 aaKnown RBP6.64□□□□□ -1.35
SSO1YPL232W SET1P38827 1080 aaKnown RBP6.64□□□□□ -1.35
SSO1YPL232W IXR1P33417 597 aa6.63□□□□□ -1.35
SSO1YPL232W KEL1P38853 1164 aaKnown RBP6.63□□□□□ -1.35
SSO1YPL232W CST6P40535 587 aa6.63□□□□□ -1.35
SSO1YPL232W NET1P47035 1189 aa6.63□□□□□ -1.35
SSO1YPL232W PSF3Q12146 194 aa6.63□□□□□ -1.35
SSO1YPL232W PRD1P25375 712 aa6.62□□□□□ -1.35
SSO1YPL232W TPS3P38426 1054 aaKnown RBP6.62□□□□□ -1.35
SSO1YPL232W JJJ2P46997 583 aa6.62□□□□□ -1.35
SSO1YPL232W ATG1P53104 897 aa6.62□□□□□ -1.35
SSO1YPL232W ITC1P53125 1264 aa6.62□□□□□ -1.35
SSO1YPL232W YDR306CQ06640 478 aa6.62□□□□□ -1.35
SSO1YPL232W ECM29P38737 1868 aa6.62□□□□□ -1.35
SSO1YPL232W RAD53P22216 821 aa6.61□□□□□ -1.35
SSO1YPL232W YBR287WP38355 427 aa6.61□□□□□ -1.35
SSO1YPL232W SRC1Q03707 834 aa6.61□□□□□ -1.35
SSO1YPL232W NUP133P36161 1157 aa6.6□□□□□ -1.35
SSO1YPL232W YFL040WP43562 540 aa6.6□□□□□ -1.35
SSO1YPL232W PSH1Q12161 406 aa6.6□□□□□ -1.35
SSO1YPL232W TY3A-GQ12173 290 aa6.6□□□□□ -1.35
SSO1YPL232W TY3A-IQ99219 290 aa6.6□□□□□ -1.35
SSO1YPL232W CDC60P26637 1090 aaKnown RBP6.59□□□□□ -1.35
SSO1YPL232W MTC5Q03897 1148 aa6.59□□□□□ -1.35
SSO1YPL232W ICL2Q12031 575 aa6.59□□□□□ -1.35
SSO1YPL232W UBR2Q07963 1872 aa6.59□□□□□ -1.35
SSO1YPL232W OCT1P35999 772 aa6.58□□□□□ -1.36
SSO1YPL232W NUG1P40010 520 aaKnown RBP6.58□□□□□ -1.36
SSO1YPL232W RTR1P40084 226 aaPredicted RBP6.58□□□□□ -1.36
SSO1YPL232W AIM21P40563 679 aa6.58□□□□□ -1.36
SSO1YPL232W PUS6P53294 404 aa6.58□□□□□ -1.36
SSO1YPL232W YPL034WQ03083 165 aa6.58□□□□□ -1.36
SSO1YPL232W CFT2Q12102 859 aaPredicted RBP6.58□□□□□ -1.36
SSO1YPL232W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
SSO1YPL232W YDR034W-BQ6Q5X2 51 aa6.58□□□□□ -1.36
SSO1YPL232W SUP35P05453 685 aaKnown RBP6.57□□□□□ -1.36
SSO1YPL232W YFH7P43591 353 aa6.57□□□□□ -1.36
SSO1YPL232W BBC1P47068 1157 aa6.57□□□□□ -1.36
SSO1YPL232W GYP7P48365 746 aa6.57□□□□□ -1.36
SSO1YPL232W FMP30Q02883 468 aa6.57□□□□□ -1.36
SSO1YPL232W PMA1P05030 918 aaKnown RBP6.56□□□□□ -1.36
SSO1YPL232W ADP1P25371 1049 aa6.56□□□□□ -1.36
SSO1YPL232W YDJ1P25491 409 aaKnown RBP6.56□□□□□ -1.36
SSO1YPL232W UIP5P36137 443 aa6.56□□□□□ -1.36
SSO1YPL232W AHC1Q12433 566 aa6.56□□□□□ -1.36
SSO1YPL232W MRP7P12687 371 aa6.55□□□□□ -1.36
SSO1YPL232W RPT3P33298 428 aaKnown RBP6.55□□□□□ -1.36
SSO1YPL232W MCD4P36051 919 aa6.55□□□□□ -1.36
SSO1YPL232W THI22Q06490 572 aa6.55□□□□□ -1.36
SSO1YPL232W RTT109Q07794 436 aa6.55□□□□□ -1.36
SSO1YPL232W YOR131CQ12486 218 aa6.55□□□□□ -1.36
SSO1YPL232W TUS1Q06412 1307 aa6.54□□□□□ -1.36
SSO1YPL232W SNF3P10870 884 aa6.54□□□□□ -1.36
SSO1YPL232W ACA1P39970 489 aa6.54□□□□□ -1.36
SSO1YPL232W APL6P46682 809 aa6.54□□□□□ -1.36
SSO1YPL232W RSM7P47150 247 aa6.54□□□□□ -1.36
SSO1YPL232W SRT1Q03175 343 aa6.54□□□□□ -1.36
SSO1YPL232W SUT2Q12286 268 aa6.54□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms