RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W FOX2Q02207 900 aaKnown RBP4.38□□□□□ -1.71
MSD1YPL104W RPS19AP07280 144 aaKnown RBP4.38□□□□□ -1.71
MSD1YPL104W RPS19BP07281 144 aaPredicted RBP4.38□□□□□ -1.71
MSD1YPL104W SIS2P36024 562 aa4.38□□□□□ -1.71
MSD1YPL104W ILV3P39522 585 aaKnown RBP4.38□□□□□ -1.71
MSD1YPL104W YDR306CQ06640 478 aa4.38□□□□□ -1.71
MSD1YPL104W COBP00163 385 aa4.37□□□□□ -1.71
MSD1YPL104W RAD24P32641 659 aa4.37□□□□□ -1.71
MSD1YPL104W YNG2P38806 282 aaKnown RBP4.37□□□□□ -1.71
MSD1YPL104W TIF4632P39936 914 aaKnown RBP4.37□□□□□ -1.71
MSD1YPL104W DOT5P40553 215 aa4.37□□□□□ -1.71
MSD1YPL104W RIM21P48565 533 aa4.37□□□□□ -1.71
MSD1YPL104W SPO1P53541 631 aa4.37□□□□□ -1.71
MSD1YPL104W GAP1P19145 602 aaPredicted RBP4.36□□□□□ -1.71
MSD1YPL104W SPT5P27692 1063 aaKnown RBP4.36□□□□□ -1.71
MSD1YPL104W YKR075CP36155 307 aa4.36□□□□□ -1.71
MSD1YPL104W YGR122WP53272 402 aa4.36□□□□□ -1.71
MSD1YPL104W DNM1P54861 757 aa4.36□□□□□ -1.71
MSD1YPL104W CSC1Q06538 782 aa4.36□□□□□ -1.71
MSD1YPL104W SWI1P09547 1314 aa4.36□□□□□ -1.71
MSD1YPL104W NUP133P36161 1157 aa4.36□□□□□ -1.71
MSD1YPL104W BOI2P39969 1040 aa4.36□□□□□ -1.71
MSD1YPL104W KTR7P40504 517 aa4.36□□□□□ -1.71
MSD1YPL104W ZDS2P54786 942 aa4.36□□□□□ -1.71
MSD1YPL104W ECM23Q02710 187 aa4.36□□□□□ -1.71
MSD1YPL104W ECM16Q04217 1267 aaKnown RBP4.36□□□□□ -1.71
MSD1YPL104W MPH3P0CE00 602 aa4.35□□□□□ -1.71
MSD1YPL104W MAK16P10962 306 aaPredicted RBP4.35□□□□□ -1.71
MSD1YPL104W SIT4P20604 311 aa4.35□□□□□ -1.71
MSD1YPL104W GRX1P25373 110 aaKnown RBP4.35□□□□□ -1.71
MSD1YPL104W CST6P40535 587 aa4.35□□□□□ -1.71
MSD1YPL104W MDG1P53885 366 aa4.35□□□□□ -1.71
MSD1YPL104W LAM6Q08001 693 aa4.35□□□□□ -1.71
MSD1YPL104W SSP2Q08646 371 aa4.35□□□□□ -1.71
MSD1YPL104W YBL113CQ7M4S9 792 aa4.35□□□□□ -1.71
MSD1YPL104W PRP40P33203 583 aaKnown RBP4.34□□□□□ -1.71
MSD1YPL104W SLI15P38283 698 aa4.34□□□□□ -1.71
MSD1YPL104W RSC30P38781 883 aa4.34□□□□□ -1.71
MSD1YPL104W NMD2P38798 1089 aaKnown RBP4.34□□□□□ -1.71
MSD1YPL104W STM1P39015 273 aaKnown RBP4.34□□□□□ -1.71
MSD1YPL104W VPS64Q03944 604 aa4.34□□□□□ -1.71
MSD1YPL104W AI4P03878 556 aa4.34□□□□□ -1.71
MSD1YPL104W SLY41P22215 453 aa4.34□□□□□ -1.71
MSD1YPL104W GCD7P32502 381 aaPredicted RBP4.34□□□□□ -1.71
MSD1YPL104W YJR008WP47085 338 aa4.34□□□□□ -1.71
MSD1YPL104W ALD2P47771 506 aa4.34□□□□□ -1.71
MSD1YPL104W RPP1BP10622 106 aaKnown RBP4.33□□□□□ -1.72
MSD1YPL104W SWC3P31376 625 aa4.33□□□□□ -1.72
MSD1YPL104W ERP5P38819 212 aa4.33□□□□□ -1.72
MSD1YPL104W YJL181WP46987 611 aa4.33□□□□□ -1.72
MSD1YPL104W CDC73Q06697 393 aa4.33□□□□□ -1.72
MSD1YPL104W TUM1Q08686 304 aaKnown RBP4.33□□□□□ -1.72
MSD1YPL104W PHM7Q12252 991 aa4.33□□□□□ -1.72
MSD1YPL104W RAD50P12753 1312 aa4.33□□□□□ -1.72
MSD1YPL104W PEP12P32854 288 aa4.33□□□□□ -1.72
MSD1YPL104W RPN11P43588 306 aaKnown RBP4.33□□□□□ -1.72
MSD1YPL104W PEX21P50091 288 aa4.33□□□□□ -1.72
MSD1YPL104W HTA1P04911 132 aaKnown RBP4.32□□□□□ -1.72
MSD1YPL104W HTA2P04912 132 aa4.32□□□□□ -1.72
MSD1YPL104W SEC20P28791 383 aa4.32□□□□□ -1.72
MSD1YPL104W ASF1P32447 279 aa4.32□□□□□ -1.72
MSD1YPL104W APL2P36000 726 aaPredicted RBP4.32□□□□□ -1.72
MSD1YPL104W UBX7P38349 436 aa4.32□□□□□ -1.72
MSD1YPL104W GTT3P39996 337 aa4.32□□□□□ -1.72
MSD1YPL104W YIR014WP40570 242 aa4.32□□□□□ -1.72
MSD1YPL104W YMR074CQ04773 145 aa4.32□□□□□ -1.72
MSD1YPL104W NKP2Q06162 153 aa4.32□□□□□ -1.72
MSD1YPL104W TFB4Q12004 338 aa4.32□□□□□ -1.72
MSD1YPL104W LPD1P09624 499 aaKnown RBP4.31□□□□□ -1.72
MSD1YPL104W RDS2P19541 446 aaKnown RBP4.31□□□□□ -1.72
MSD1YPL104W RFC1P38630 861 aaKnown RBP4.31□□□□□ -1.72
MSD1YPL104W TGL3P40308 642 aa4.31□□□□□ -1.72
MSD1YPL104W SET4P42948 560 aa4.31□□□□□ -1.72
MSD1YPL104W PKH1Q03407 766 aa4.31□□□□□ -1.72
MSD1YPL104W YOL036WQ08206 761 aa4.31□□□□□ -1.72
MSD1YPL104W MSB4Q12317 492 aa4.31□□□□□ -1.72
MSD1YPL104W CDC16P09798 840 aa4.31□□□□□ -1.72
MSD1YPL104W UBP1P25037 809 aa4.31□□□□□ -1.72
MSD1YPL104W UBP12P39538 1254 aa4.31□□□□□ -1.72
MSD1YPL104W BDP1P46678 594 aa4.31□□□□□ -1.72
MSD1YPL104W MSC6Q08818 692 aaKnown RBP4.31□□□□□ -1.72
MSD1YPL104W ISF1P32488 338 aa4.3□□□□□ -1.72
MSD1YPL104W NPR2P39923 615 aa4.3□□□□□ -1.72
MSD1YPL104W DAN4P47179 1161 aa4.3□□□□□ -1.72
MSD1YPL104W YGL082WP53155 381 aa4.3□□□□□ -1.72
MSD1YPL104W KAR5Q04746 504 aa4.3□□□□□ -1.72
MSD1YPL104W MCM16Q12262 181 aa4.3□□□□□ -1.72
MSD1YPL104W NCB2Q92317 146 aa4.3□□□□□ -1.72
MSD1YPL104W GAL2P13181 574 aa4.29□□□□□ -1.72
MSD1YPL104W TRM1P15565 570 aaKnown RBP4.29□□□□□ -1.72
MSD1YPL104W SER1P33330 395 aaKnown RBP4.29□□□□□ -1.72
MSD1YPL104W OPY1P38271 328 aa4.29□□□□□ -1.72
MSD1YPL104W DUR1,2P32528 1835 aaKnown RBP4.29□□□□□ -1.72
MSD1YPL104W GRS1P38088 690 aaKnown RBP4.29□□□□□ -1.72
MSD1YPL104W TPS3P38426 1054 aaKnown RBP4.29□□□□□ -1.72
MSD1YPL104W YHL050CP38721 697 aa4.29□□□□□ -1.72
MSD1YPL104W YHR219WP38900 624 aa4.29□□□□□ -1.72
MSD1YPL104W ITC1P53125 1264 aa4.29□□□□□ -1.72
MSD1YPL104W YNL115CP53925 644 aa4.29□□□□□ -1.72
MSD1YPL104W MTC5Q03897 1148 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms