RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W BOI1P38041 980 aaKnown RBP2.52□□□□□ -2.01
SEC16YPL085W UBP12P39538 1254 aa2.52□□□□□ -2.01
SEC16YPL085W SRC1Q03707 834 aa2.52□□□□□ -2.01
SEC16YPL085W CHC1P22137 1653 aaKnown RBP2.52□□□□□ -2.01
SEC16YPL085W SWI6P09959 803 aa2.52□□□□□ -2.01
SEC16YPL085W BIK1P11709 440 aa2.52□□□□□ -2.01
SEC16YPL085W SAP190P36123 1033 aa2.52□□□□□ -2.01
SEC16YPL085W VAB2P40003 282 aa2.52□□□□□ -2.01
SEC16YPL085W RLP24Q07915 199 aaKnown RBP2.52□□□□□ -2.01
SEC16YPL085W TIP41Q12199 356 aa2.52□□□□□ -2.01
SEC16YPL085W CIT2P08679 460 aa2.52□□□□□ -2.01
SEC16YPL085W TRL1P09880 827 aaKnown RBP2.52□□□□□ -2.01
SEC16YPL085W GAL2P13181 574 aa2.52□□□□□ -2.01
SEC16YPL085W STU2P46675 888 aa2.52□□□□□ -2.01
SEC16YPL085W TCB2P48231 1178 aa2.52□□□□□ -2.01
SEC16YPL085W ARP5P53946 755 aa2.52□□□□□ -2.01
SEC16YPL085W APL5Q08951 932 aaKnown RBP2.52□□□□□ -2.01
SEC16YPL085W RIO1Q12196 484 aaKnown RBP2.52□□□□□ -2.01
SEC16YPL085W NBL1Q3E7Y6 73 aa2.52□□□□□ -2.01
SEC16YPL085W LAM4P38800 1345 aa2.51□□□□□ -2.01
SEC16YPL085W CTT1P06115 562 aa2.51□□□□□ -2.01
SEC16YPL085W SAK1P38990 1142 aa2.51□□□□□ -2.01
SEC16YPL085W DPH6Q12429 685 aa2.51□□□□□ -2.01
SEC16YPL085W EFG1Q3E705 233 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W TY1B-HO13535 1793 aa2.51□□□□□ -2.01
SEC16YPL085W TY1B-DR5P0C2I2 1755 aa2.51□□□□□ -2.01
SEC16YPL085W TY1B-DR6P0C2I3 1755 aa2.51□□□□□ -2.01
SEC16YPL085W TY1B-LR2P0C2I5 1755 aa2.51□□□□□ -2.01
SEC16YPL085W TY1B-LR3P0C2I6 1755 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W TY1B-PR1P0C2I9 1755 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W TY1B-PR2P0C2J0 1756 aa2.51□□□□□ -2.01
SEC16YPL085W TY1B-PR3P0C2J1 1755 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W TY1B-JR1P47098 1755 aa2.51□□□□□ -2.01
SEC16YPL085W TY1B-ML2Q03434 1755 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W TY1B-ER1Q03612 1755 aa2.51□□□□□ -2.01
SEC16YPL085W TY1B-ML1Q04711 1755 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W TY1B-GR2Q12269 1755 aa2.51□□□□□ -2.01
SEC16YPL085W TY1B-OLQ12273 1755 aa2.51□□□□□ -2.01
SEC16YPL085W TY1B-PLQ12414 1755 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W YEL043WP32618 956 aa2.51□□□□□ -2.01
SEC16YPL085W BDH2P39713 417 aa2.51□□□□□ -2.01
SEC16YPL085W LSB1P53281 241 aa2.51□□□□□ -2.01
SEC16YPL085W CAB1Q04430 367 aa2.51□□□□□ -2.01
SEC16YPL085W CFT2Q12102 859 aaPredicted RBP2.51□□□□□ -2.01
SEC16YPL085W RUD3Q12234 484 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W SSA4P22202 642 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W SMY1P32364 656 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W APL2P36000 726 aaPredicted RBP2.51□□□□□ -2.01
SEC16YPL085W BSD2P38356 321 aa2.51□□□□□ -2.01
SEC16YPL085W YIL092WP40497 633 aa2.51□□□□□ -2.01
SEC16YPL085W YNL247WP53852 767 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W APP1P53933 587 aa2.51□□□□□ -2.01
SEC16YPL085W CTR9P89105 1077 aa2.51□□□□□ -2.01
SEC16YPL085W TOM70P07213 617 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W SPE3Q12074 293 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W TYS1P36421 394 aaKnown RBP2.51□□□□□ -2.01
SEC16YPL085W NOP13P53883 403 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
SEC16YPL085W ISW2Q08773 1120 aa2.51□□□□□ -2.01
SEC16YPL085W PWP2P25635 923 aaKnown RBP2.5□□□□□ -2.01
SEC16YPL085W NIP100P33420 868 aa2.5□□□□□ -2.01
SEC16YPL085W RXT2P38255 430 aa2.5□□□□□ -2.01
SEC16YPL085W VPS64Q03944 604 aa2.5□□□□□ -2.01
SEC16YPL085W YCG1Q06680 1035 aa2.5□□□□□ -2.01
SEC16YPL085W HFI1Q12060 488 aa2.5□□□□□ -2.01
SEC16YPL085W PUP2P32379 260 aa2.5□□□□□ -2.01
SEC16YPL085W RRT6P53117 311 aaPredicted RBP2.5□□□□□ -2.01
SEC16YPL085W DPS1P04802 557 aaKnown RBP2.5□□□□□ -2.01
SEC16YPL085W SEC21P32074 935 aaKnown RBP2.5□□□□□ -2.01
SEC16YPL085W YAP1801P38856 637 aa2.5□□□□□ -2.01
SEC16YPL085W RRP8P38961 392 aaKnown RBP2.5□□□□□ -2.01
SEC16YPL085W SHC1P39000 512 aa2.5□□□□□ -2.01
SEC16YPL085W YKE2P52553 114 aa2.5□□□□□ -2.01
SEC16YPL085W YDL121CQ07541 149 aa2.5□□□□□ -2.01
SEC16YPL085W TAH18Q12181 623 aa2.5□□□□□ -2.01
SEC16YPL085W TY1B-BRQ12193 1756 aa2.5□□□□□ -2.01
SEC16YPL085W TY1B-GR3Q12316 1755 aa2.5□□□□□ -2.01
SEC16YPL085W TY1B-ORQ92393 1755 aa2.5□□□□□ -2.01
SEC16YPL085W PBY1P38254 753 aa2.5□□□□□ -2.01
SEC16YPL085W BTN2P53286 410 aa2.5□□□□□ -2.01
SEC16YPL085W DOS2P54858 310 aa2.5□□□□□ -2.01
SEC16YPL085W BDF2Q07442 638 aa2.5□□□□□ -2.01
SEC16YPL085W YVC1Q12324 675 aa2.5□□□□□ -2.01
SEC16YPL085W ERT1P38140 529 aa2.5□□□□□ -2.01
SEC16YPL085W BRN1P38170 754 aa2.5□□□□□ -2.01
SEC16YPL085W VPS53P47061 822 aa2.5□□□□□ -2.01
SEC16YPL085W YJR098CP47139 656 aa2.5□□□□□ -2.01
SEC16YPL085W OPY2Q06810 360 aa2.5□□□□□ -2.01
SEC16YPL085W NOP58Q12499 511 aaKnown RBP2.5□□□□□ -2.01
SEC16YPL085W RRP14P36080 434 aaKnown RBP2.49□□□□□ -2.01
SEC16YPL085W HMT1P38074 348 aa2.49□□□□□ -2.01
SEC16YPL085W EFM2P38347 419 aa2.49□□□□□ -2.01
SEC16YPL085W SSA2P10592 639 aaKnown RBP2.49□□□□□ -2.01
SEC16YPL085W BCD1P38772 366 aa2.49□□□□□ -2.01
SEC16YPL085W NDC80P40460 691 aa2.49□□□□□ -2.01
SEC16YPL085W FET4P40988 552 aa2.49□□□□□ -2.01
SEC16YPL085W YFL040WP43562 540 aa2.49□□□□□ -2.01
SEC16YPL085W TUS1Q06412 1307 aa2.49□□□□□ -2.01
SEC16YPL085W FOB1O13329 566 aa2.49□□□□□ -2.01
SEC16YPL085W SNA3P14359 133 aa2.49□□□□□ -2.01
SEC16YPL085W CTM1P38818 585 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms