RNA–Protein interactions for RNA: YPL019C

VTC3, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC3, Length 2,508 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC3	YPL019C	TAP42	Q04372	366 aa		3.22	□□□□□ -1.89
VTC3	YPL019C	INP54	Q08227	384 aa	Known RBP	3.22	□□□□□ -1.89
VTC3	YPL019C	YPR204W	Q08995	1032 aa		3.22	□□□□□ -1.89
VTC3	YPL019C	KEX2	P13134	814 aa		3.21	□□□□□ -1.9
VTC3	YPL019C	GEF1	P37020	779 aa		3.21	□□□□□ -1.9
VTC3	YPL019C	NMA111	P53920	997 aa		3.21	□□□□□ -1.9
VTC3	YPL019C	YNL035C	P53962	389 aa	Known RBP	3.21	□□□□□ -1.9
VTC3	YPL019C	YML083C	Q04526	418 aa		3.21	□□□□□ -1.9
VTC3	YPL019C	NYV1	Q12255	253 aa		3.21	□□□□□ -1.9
VTC3	YPL019C	ENO1	P00924	437 aa	Known RBP	3.21	□□□□□ -1.9
VTC3	YPL019C	RDS2	P19541	446 aa	Known RBP	3.21	□□□□□ -1.9
VTC3	YPL019C	AGE1	Q04412	482 aa		3.21	□□□□□ -1.9
VTC3	YPL019C	TY1A-DR4	O74302	440 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	TY1A-H	P0C2I4	478 aa	Known RBP	3.2	□□□□□ -1.9
VTC3	YPL019C	TY1A-A	P0CX57	440 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	TY1A-PR1	P0CX58	440 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	TY1A-OR	P0CX59	440 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	TY1A-PR2	P0CX60	440 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	TY1A-DR5	P0CX65	440 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	TY1A-ER2	P0CX66	440 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	TY1A-GR3	P0CX67	440 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	TY1A-LR1	P0CX68	440 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	TY1A-MR2	P0CX69	440 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	MAK16	P10962	306 aa	Predicted RBP	3.2	□□□□□ -1.9
VTC3	YPL019C	SEC2	P17065	759 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	ARG8	P18544	423 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	SLY41	P22215	453 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	PUP1	P25043	261 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	PFF1	P38244	976 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	TY1A-JR2	P47099	440 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	STR2	P47164	639 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	RIM21	P48565	533 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	YNL115C	P53925	644 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	TY1A-DR1	Q03856	440 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	TY1A-ML1	Q04706	440 aa	Known RBP	3.2	□□□□□ -1.9
VTC3	YPL019C	ISU2	Q12056	156 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	TY1A-BR	Q12217	440 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	TY1A-NL2	Q12470	440 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	TY1A-GR2	Q12485	440 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	TRM1	P15565	570 aa	Known RBP	3.2	□□□□□ -1.9
VTC3	YPL019C	RAM1	P22007	431 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	RTG1	P32607	177 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	CTF4	Q01454	927 aa		3.2	□□□□□ -1.9
VTC3	YPL019C	AUS1	Q08409	1394 aa		3.19	□□□□□ -1.9
VTC3	YPL019C	ISM1	P48526	1002 aa		3.19	□□□□□ -1.9
VTC3	YPL019C	MDG1	P53885	366 aa		3.19	□□□□□ -1.9
VTC3	YPL019C	CTI6	Q08923	506 aa		3.19	□□□□□ -1.9
VTC3	YPL019C	RET1	P22276	1149 aa	Known RBP	3.19	□□□□□ -1.9
VTC3	YPL019C	NUD1	P32336	851 aa		3.19	□□□□□ -1.9
VTC3	YPL019C	PEP12	P32854	288 aa		3.19	□□□□□ -1.9
VTC3	YPL019C	NUP145	P49687	1317 aa		3.18	□□□□□ -1.9
VTC3	YPL019C	TOP1	P04786	769 aa		3.18	□□□□□ -1.9
VTC3	YPL019C	THS1	P04801	734 aa	Known RBP	3.18	□□□□□ -1.9
VTC3	YPL019C	LPD1	P09624	499 aa	Known RBP	3.18	□□□□□ -1.9
VTC3	YPL019C	HSP104	P31539	908 aa	Known RBP	3.18	□□□□□ -1.9
VTC3	YPL019C	SLX8	P40072	274 aa		3.18	□□□□□ -1.9
VTC3	YPL019C	DUS1	P53759	423 aa	Known RBP	3.18	□□□□□ -1.9
VTC3	YPL019C	HIM1	Q06674	414 aa		3.18	□□□□□ -1.9
VTC3	YPL019C	ATG20	Q07528	640 aa		3.18	□□□□□ -1.9
VTC3	YPL019C	RPP1B	P10622	106 aa	Known RBP	3.18	□□□□□ -1.9
VTC3	YPL019C	SMY1	P32364	656 aa	Known RBP	3.18	□□□□□ -1.9
VTC3	YPL019C	SEC61	P32915	480 aa		3.18	□□□□□ -1.9
VTC3	YPL019C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
VTC3	YPL019C	RAT1	Q02792	1006 aa	Known RBP	3.18	□□□□□ -1.9
VTC3	YPL019C	RMT2	Q03305	412 aa		3.18	□□□□□ -1.9
VTC3	YPL019C	NCR1	Q12200	1170 aa		3.18	□□□□□ -1.9
VTC3	YPL019C	YPR015C	Q12531	247 aa		3.18	□□□□□ -1.9
VTC3	YPL019C	SHC1	P39000	512 aa		3.17	□□□□□ -1.9
VTC3	YPL019C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
VTC3	YPL019C	DSD1	P53095	428 aa		3.17	□□□□□ -1.9
VTC3	YPL019C	ERO1	Q03103	563 aa		3.17	□□□□□ -1.9
VTC3	YPL019C	IRC3	Q06683	689 aa		3.17	□□□□□ -1.9
VTC3	YPL019C	KAR2	P16474	682 aa	Known RBP	3.17	□□□□□ -1.9
VTC3	YPL019C	ICL1	P28240	557 aa	Predicted RBP	3.17	□□□□□ -1.9
VTC3	YPL019C	YKU70	P32807	602 aa		3.17	□□□□□ -1.9
VTC3	YPL019C	SER1	P33330	395 aa	Known RBP	3.17	□□□□□ -1.9
VTC3	YPL019C	ETP1	P38748	585 aa	Known RBP	3.17	□□□□□ -1.9
VTC3	YPL019C	RPL34B	P40525	121 aa	Known RBP	3.17	□□□□□ -1.9
VTC3	YPL019C	YFR016C	P43597	1233 aa	Known RBP	3.17	□□□□□ -1.9
VTC3	YPL019C	DIB1	Q06819	143 aa	Predicted RBP	3.17	□□□□□ -1.9
VTC3	YPL019C	TUB4	P53378	473 aa		3.16	□□□□□ -1.9
VTC3	YPL019C	BDF2	Q07442	638 aa		3.16	□□□□□ -1.9
VTC3	YPL019C	BUD20	Q08004	166 aa	Predicted RBP	3.16	□□□□□ -1.9
VTC3	YPL019C	PHM7	Q12252	991 aa		3.16	□□□□□ -1.9
VTC3	YPL019C	POM152	P39685	1337 aa		3.16	□□□□□ -1.9
VTC3	YPL019C	YLR278C	Q05854	1341 aa		3.16	□□□□□ -1.9
VTC3	YPL019C	PUS6	P53294	404 aa		3.16	□□□□□ -1.9
VTC3	YPL019C	YPR084W	Q06821	456 aa		3.16	□□□□□ -1.9
VTC3	YPL019C	GRX6	Q12438	231 aa		3.16	□□□□□ -1.9
VTC3	YPL019C	SPT5	P27692	1063 aa	Known RBP	3.15	□□□□□ -1.91
VTC3	YPL019C	ISF1	P32488	338 aa		3.15	□□□□□ -1.91
VTC3	YPL019C	TGL4	P36165	910 aa		3.15	□□□□□ -1.91
VTC3	YPL019C	AOS1	Q06624	347 aa		3.15	□□□□□ -1.91
VTC3	YPL019C	YDL129W	Q07555	291 aa		3.15	□□□□□ -1.91
VTC3	YPL019C	FAS2	P19097	1887 aa	Known RBP	3.15	□□□□□ -1.91
VTC3	YPL019C	KCC4	P25389	1037 aa		3.15	□□□□□ -1.91
VTC3	YPL019C	ARH1	P48360	493 aa		3.15	□□□□□ -1.91
VTC3	YPL019C	MCM16	Q12262	181 aa		3.15	□□□□□ -1.91
VTC3	YPL019C	UTP10	P42945	1769 aa	Known RBP	3.14	□□□□□ -1.91
VTC3	YPL019C	MSM1	P22438	575 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms