RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL1	YPL008W	MSB3	P48566	633 aa	Predicted RBP	4.81	□□□□□ -1.64
CHL1	YPL008W	FRT1	Q99332	602 aa		4.81	□□□□□ -1.64
CHL1	YPL008W	COQ4	O13525	335 aa		4.8	□□□□□ -1.64
CHL1	YPL008W	OPY1	P38271	328 aa		4.8	□□□□□ -1.64
CHL1	YPL008W	NUP145	P49687	1317 aa		4.8	□□□□□ -1.64
CHL1	YPL008W	YHL050C	P38721	697 aa		4.8	□□□□□ -1.64
CHL1	YPL008W	YHR219W	P38900	624 aa		4.8	□□□□□ -1.64
CHL1	YPL008W	DNM1	P54861	757 aa		4.8	□□□□□ -1.64
CHL1	YPL008W	ECM23	Q02710	187 aa		4.8	□□□□□ -1.64
CHL1	YPL008W	YEL077C	Q3E7X8	1277 aa		4.8	□□□□□ -1.64
CHL1	YPL008W	CST6	P40535	587 aa		4.79	□□□□□ -1.64
CHL1	YPL008W	MDG1	P53885	366 aa		4.79	□□□□□ -1.64
CHL1	YPL008W	CSI1	Q04368	295 aa		4.79	□□□□□ -1.64
CHL1	YPL008W	INP54	Q08227	384 aa	Known RBP	4.79	□□□□□ -1.64
CHL1	YPL008W	LSP1	Q12230	341 aa	Known RBP	4.79	□□□□□ -1.64
CHL1	YPL008W	MRP7	P12687	371 aa		4.79	□□□□□ -1.64
CHL1	YPL008W	MET4	P32389	672 aa		4.79	□□□□□ -1.64
CHL1	YPL008W	GCD7	P32502	381 aa	Predicted RBP	4.79	□□□□□ -1.64
CHL1	YPL008W	YPR109W	Q06104	294 aa		4.79	□□□□□ -1.64
CHL1	YPL008W	ROM2	P51862	1356 aa	Known RBP	4.78	□□□□□ -1.64
CHL1	YPL008W	MPH3	P0CE00	602 aa		4.78	□□□□□ -1.64
CHL1	YPL008W	VPS24	P36095	224 aa	Known RBP	4.78	□□□□□ -1.64
CHL1	YPL008W	CDC73	Q06697	393 aa		4.78	□□□□□ -1.64
CHL1	YPL008W	YIL177C	P40434	1758 aa		4.78	□□□□□ -1.64
CHL1	YPL008W	YJL225C	P40889	1758 aa		4.78	□□□□□ -1.64
CHL1	YPL008W	CLC1	P17891	233 aa		4.78	□□□□□ -1.64
CHL1	YPL008W	KIC1	P38692	1080 aa		4.78	□□□□□ -1.64
CHL1	YPL008W	NMD2	P38798	1089 aa	Known RBP	4.78	□□□□□ -1.64
CHL1	YPL008W	YJR008W	P47085	338 aa		4.78	□□□□□ -1.64
CHL1	YPL008W	YDR306C	Q06640	478 aa		4.78	□□□□□ -1.64
CHL1	YPL008W	AI4	P03878	556 aa		4.77	□□□□□ -1.65
CHL1	YPL008W	ISF1	P32488	338 aa		4.77	□□□□□ -1.65
CHL1	YPL008W	IOC3	P43596	787 aa		4.77	□□□□□ -1.65
CHL1	YPL008W	CDC16	P09798	840 aa		4.77	□□□□□ -1.65
CHL1	YPL008W	RAD4	P14736	754 aa		4.77	□□□□□ -1.65
CHL1	YPL008W	ARG8	P18544	423 aa		4.77	□□□□□ -1.65
CHL1	YPL008W	SEC8	P32855	1065 aa		4.77	□□□□□ -1.65
CHL1	YPL008W	SPO1	P53541	631 aa		4.77	□□□□□ -1.65
CHL1	YPL008W	RMT2	Q03305	412 aa		4.77	□□□□□ -1.65
CHL1	YPL008W	ERF2	Q06551	359 aa		4.77	□□□□□ -1.65
CHL1	YPL008W	ATG13	Q06628	738 aa		4.77	□□□□□ -1.65
CHL1	YPL008W	GPI13	Q07830	1017 aa		4.77	□□□□□ -1.65
CHL1	YPL008W	SUP35	P05453	685 aa	Known RBP	4.76	□□□□□ -1.65
CHL1	YPL008W	YBR287W	P38355	427 aa		4.76	□□□□□ -1.65
CHL1	YPL008W	SNF7	P39929	240 aa	Known RBP	4.76	□□□□□ -1.65
CHL1	YPL008W	BOI2	P39969	1040 aa		4.76	□□□□□ -1.65
CHL1	YPL008W	APL6	P46682	809 aa		4.76	□□□□□ -1.65
CHL1	YPL008W	NKP2	Q06162	153 aa		4.76	□□□□□ -1.65
CHL1	YPL008W	SSP2	Q08646	371 aa		4.76	□□□□□ -1.65
CHL1	YPL008W	NCB2	Q92317	146 aa		4.76	□□□□□ -1.65
CHL1	YPL008W	PCT1	P13259	424 aa		4.76	□□□□□ -1.65
CHL1	YPL008W	OSM1	P21375	501 aa	Known RBP	4.76	□□□□□ -1.65
CHL1	YPL008W	YJR107W	P47145	328 aa		4.76	□□□□□ -1.65
CHL1	YPL008W	YPR084W	Q06821	456 aa		4.76	□□□□□ -1.65
CHL1	YPL008W	ENT1	Q12518	454 aa		4.76	□□□□□ -1.65
CHL1	YPL008W	RFC1	P38630	861 aa	Known RBP	4.75	□□□□□ -1.65
CHL1	YPL008W	STM1	P39015	273 aa	Known RBP	4.75	□□□□□ -1.65
CHL1	YPL008W	ROM1	P53046	1155 aa		4.75	□□□□□ -1.65
CHL1	YPL008W	MCM16	Q12262	181 aa		4.75	□□□□□ -1.65
CHL1	YPL008W	GAL2	P13181	574 aa		4.75	□□□□□ -1.65
CHL1	YPL008W	BRN1	P38170	754 aa		4.75	□□□□□ -1.65
CHL1	YPL008W	TAT2	P38967	592 aa		4.75	□□□□□ -1.65
CHL1	YPL008W	KRI1	P42846	591 aa	Known RBP	4.75	□□□□□ -1.65
CHL1	YPL008W	YBP2	P53169	641 aa		4.75	□□□□□ -1.65
CHL1	YPL008W	GCR2	Q01722	534 aa		4.75	□□□□□ -1.65
CHL1	YPL008W	GRX1	P25373	110 aa	Known RBP	4.74	□□□□□ -1.65
CHL1	YPL008W	CLB5	P30283	435 aa		4.74	□□□□□ -1.65
CHL1	YPL008W	RAD24	P32641	659 aa		4.74	□□□□□ -1.65
CHL1	YPL008W	KTR2	P33550	425 aa		4.74	□□□□□ -1.65
CHL1	YPL008W	EBP2	P36049	427 aa	Known RBP	4.74	□□□□□ -1.65
CHL1	YPL008W	YKL133C	P36066	463 aa		4.74	□□□□□ -1.65
CHL1	YPL008W	PPX1	P38698	397 aa		4.74	□□□□□ -1.65
CHL1	YPL008W	YAP5	P40574	245 aa		4.74	□□□□□ -1.65
CHL1	YPL008W	MST1	P07236	462 aa		4.74	□□□□□ -1.65
CHL1	YPL008W	TPM1	P17536	199 aa	Known RBP	4.74	□□□□□ -1.65
CHL1	YPL008W	FYV10	P40492	516 aa		4.74	□□□□□ -1.65
CHL1	YPL008W	SUV3	P32580	737 aa		4.73	□□□□□ -1.65
CHL1	YPL008W	SWE1	P32944	819 aa		4.73	□□□□□ -1.65
CHL1	YPL008W	UBX7	P38349	436 aa		4.73	□□□□□ -1.65
CHL1	YPL008W	KTR7	P40504	517 aa		4.73	□□□□□ -1.65
CHL1	YPL008W	ADE16	P54113	591 aa	Known RBP	4.73	□□□□□ -1.65
CHL1	YPL008W	AGE1	Q04412	482 aa		4.73	□□□□□ -1.65
CHL1	YPL008W	COG8	Q04632	607 aa		4.73	□□□□□ -1.65
CHL1	YPL008W	ALE1	Q08548	619 aa		4.73	□□□□□ -1.65
CHL1	YPL008W	ENV9	Q08651	330 aa		4.73	□□□□□ -1.65
CHL1	YPL008W	GYP5	Q12344	894 aa		4.73	□□□□□ -1.65
CHL1	YPL008W	RNR2	P09938	399 aa	Known RBP	4.73	□□□□□ -1.65
CHL1	YPL008W	SPT5	P27692	1063 aa	Known RBP	4.73	□□□□□ -1.65
CHL1	YPL008W	ITC1	P53125	1264 aa		4.73	□□□□□ -1.65
CHL1	YPL008W	NUT2	Q06213	157 aa		4.73	□□□□□ -1.65
CHL1	YPL008W	IMH1	Q06704	911 aa	Known RBP	4.73	□□□□□ -1.65
CHL1	YPL008W	MNL2	Q12205	849 aa		4.73	□□□□□ -1.65
CHL1	YPL008W	TRM1	P15565	570 aa	Known RBP	4.72	□□□□□ -1.65
CHL1	YPL008W	ROX1	P25042	368 aa		4.72	□□□□□ -1.65
CHL1	YPL008W	DLD1	P32891	587 aa		4.72	□□□□□ -1.65
CHL1	YPL008W	NUP133	P36161	1157 aa		4.72	□□□□□ -1.65
CHL1	YPL008W	DAN4	P47179	1161 aa		4.72	□□□□□ -1.65
CHL1	YPL008W	ALD3	P54114	506 aa		4.72	□□□□□ -1.65
CHL1	YPL008W	TOS4	Q06266	489 aa		4.72	□□□□□ -1.65
CHL1	YPL008W	PHM7	Q12252	991 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms