RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C YFL034WP43564 1073 aa6.98□□□□□ -1.29
SNF8YPL002C YNL165WP53891 406 aa6.97□□□□□ -1.29
SNF8YPL002C TSC13Q99190 310 aa6.97□□□□□ -1.29
SNF8YPL002C MRPL16P38064 232 aa6.96□□□□□ -1.3
SNF8YPL002C DRS2P39524 1355 aa6.95□□□□□ -1.3
SNF8YPL002C TRM732Q03496 1420 aa6.94□□□□□ -1.3
SNF8YPL002C MCM1P11746 286 aa6.94□□□□□ -1.3
SNF8YPL002C KTR7P40504 517 aa6.94□□□□□ -1.3
SNF8YPL002C SBE2P42223 864 aaKnown RBP6.94□□□□□ -1.3
SNF8YPL002C STB3Q12427 513 aa6.94□□□□□ -1.3
SNF8YPL002C FPS1P23900 669 aa6.93□□□□□ -1.3
SNF8YPL002C LSB3P43603 459 aaKnown RBP6.93□□□□□ -1.3
SNF8YPL002C ALD2P47771 506 aa6.93□□□□□ -1.3
SNF8YPL002C LEU1P07264 779 aaKnown RBP6.92□□□□□ -1.3
SNF8YPL002C ACS2P52910 683 aaKnown RBP6.92□□□□□ -1.3
SNF8YPL002C GPM1P00950 247 aaKnown RBP6.91□□□□□ -1.3
SNF8YPL002C CYT1P07143 309 aa6.91□□□□□ -1.3
SNF8YPL002C SPR3P41901 512 aa6.91□□□□□ -1.3
SNF8YPL002C TOP2P06786 1428 aaKnown RBP6.91□□□□□ -1.3
SNF8YPL002C MMS22Q06164 1454 aa6.91□□□□□ -1.3
SNF8YPL002C TY1B-HO13535 1793 aa6.9□□□□□ -1.31
SNF8YPL002C TY1B-DR5P0C2I2 1755 aa6.9□□□□□ -1.31
SNF8YPL002C TY1B-DR6P0C2I3 1755 aa6.9□□□□□ -1.31
SNF8YPL002C TY1B-LR2P0C2I5 1755 aa6.9□□□□□ -1.31
SNF8YPL002C TY1B-LR3P0C2I6 1755 aaKnown RBP6.9□□□□□ -1.31
SNF8YPL002C TY1B-PR1P0C2I9 1755 aaKnown RBP6.9□□□□□ -1.31
SNF8YPL002C TY1B-PR2P0C2J0 1756 aa6.9□□□□□ -1.31
SNF8YPL002C TY1B-PR3P0C2J1 1755 aaKnown RBP6.9□□□□□ -1.31
SNF8YPL002C TY1B-JR1P47098 1755 aa6.9□□□□□ -1.31
SNF8YPL002C TY1B-ML2Q03434 1755 aaKnown RBP6.9□□□□□ -1.31
SNF8YPL002C TY1B-ER1Q03612 1755 aa6.9□□□□□ -1.31
SNF8YPL002C TY1B-ML1Q04711 1755 aaKnown RBP6.9□□□□□ -1.31
SNF8YPL002C TY1B-GR2Q12269 1755 aa6.9□□□□□ -1.31
SNF8YPL002C TY1B-OLQ12273 1755 aa6.9□□□□□ -1.31
SNF8YPL002C TY1B-PLQ12414 1755 aaKnown RBP6.9□□□□□ -1.31
SNF8YPL002C TY2B-BQ12491 1770 aa6.9□□□□□ -1.31
SNF8YPL002C PHO87P25360 923 aa6.89□□□□□ -1.31
SNF8YPL002C MLF3P32047 452 aa6.89□□□□□ -1.31
SNF8YPL002C TDA6Q06466 467 aa6.89□□□□□ -1.31
SNF8YPL002C Q0182Q9ZZW1 134 aa6.89□□□□□ -1.31
SNF8YPL002C DMA2P53924 522 aa6.87□□□□□ -1.31
SNF8YPL002C TY1A-DR2Q03964 440 aaKnown RBP6.87□□□□□ -1.31
SNF8YPL002C YPR053CQ6Q5F3 151 aa6.87□□□□□ -1.31
SNF8YPL002C RGP1P16664 663 aa6.86□□□□□ -1.31
SNF8YPL002C YTA6P40328 754 aa6.86□□□□□ -1.31
SNF8YPL002C YRF1-1P0CX20 1796 aa6.85□□□□□ -1.31
SNF8YPL002C YRF1-5P0CX21 1796 aa6.85□□□□□ -1.31
SNF8YPL002C YRF1-8P0CX22 1796 aa6.85□□□□□ -1.31
SNF8YPL002C HAP4P14064 554 aa6.85□□□□□ -1.31
SNF8YPL002C UBP1P25037 809 aa6.85□□□□□ -1.31
SNF8YPL002C MSC7P38694 644 aa6.85□□□□□ -1.31
SNF8YPL002C CCT8P47079 568 aaKnown RBP6.85□□□□□ -1.31
SNF8YPL002C YNR014WP53719 212 aa6.85□□□□□ -1.31
SNF8YPL002C VPS15P22219 1454 aa6.85□□□□□ -1.31
SNF8YPL002C NUP159P40477 1460 aa6.85□□□□□ -1.31
SNF8YPL002C TY1B-DR3Q99231 1755 aa6.85□□□□□ -1.31
SNF8YPL002C PDC5P16467 563 aaKnown RBP6.84□□□□□ -1.31
SNF8YPL002C SIS2P36024 562 aa6.84□□□□□ -1.31
SNF8YPL002C ROM1P53046 1155 aa6.84□□□□□ -1.31
SNF8YPL002C GAS4Q08271 471 aa6.84□□□□□ -1.31
SNF8YPL002C IRC20Q06554 1556 aa6.83□□□□□ -1.32
SNF8YPL002C GAL2P13181 574 aa6.83□□□□□ -1.32
SNF8YPL002C KNS1P32350 737 aaPredicted RBP6.82□□□□□ -1.32
SNF8YPL002C TTI1P36097 1038 aa6.81□□□□□ -1.32
SNF8YPL002C MCX1P38323 520 aaPredicted RBP6.81□□□□□ -1.32
SNF8YPL002C HXT5P38695 592 aa6.81□□□□□ -1.32
SNF8YPL002C SKN7P38889 622 aa6.81□□□□□ -1.32
SNF8YPL002C BOI2P39969 1040 aa6.81□□□□□ -1.32
SNF8YPL002C YMR187CQ03236 431 aa6.81□□□□□ -1.32
SNF8YPL002C NGR1P32831 672 aaKnown RBP6.8□□□□□ -1.32
SNF8YPL002C TGL4P36165 910 aa6.8□□□□□ -1.32
SNF8YPL002C MTO1P53070 669 aa6.8□□□□□ -1.32
SNF8YPL002C UTP4Q06679 776 aaKnown RBP6.79□□□□□ -1.32
SNF8YPL002C DNF2Q12675 1612 aa6.79□□□□□ -1.32
SNF8YPL002C SPP41P38904 1435 aa6.78□□□□□ -1.32
SNF8YPL002C YCK2P23292 546 aaKnown RBP6.78□□□□□ -1.32
SNF8YPL002C SCD5P34758 872 aa6.78□□□□□ -1.32
SNF8YPL002C RPP1AP05318 106 aaPredicted RBP6.77□□□□□ -1.33
SNF8YPL002C ECM23Q02710 187 aa6.77□□□□□ -1.33
SNF8YPL002C SKP1P52286 194 aa6.76□□□□□ -1.33
SNF8YPL002C CUS1Q02554 436 aaPredicted RBP6.76□□□□□ -1.33
SNF8YPL002C YDR215CQ12240 137 aa6.76□□□□□ -1.33
SNF8YPL002C SMC4Q12267 1418 aa6.76□□□□□ -1.33
SNF8YPL002C TY1B-JR2P47100 1755 aaKnown RBP6.75□□□□□ -1.33
SNF8YPL002C TY1B-ER2Q03619 1755 aa6.75□□□□□ -1.33
SNF8YPL002C TY1B-MR1Q04214 1755 aa6.75□□□□□ -1.33
SNF8YPL002C TY1B-MR2Q04670 1755 aaKnown RBP6.75□□□□□ -1.33
SNF8YPL002C TY1B-LR1Q12088 1755 aaKnown RBP6.75□□□□□ -1.33
SNF8YPL002C TY1B-NL1Q12112 1755 aa6.75□□□□□ -1.33
SNF8YPL002C TY1B-GR1Q12141 1755 aa6.75□□□□□ -1.33
SNF8YPL002C TY1B-BLQ12490 1755 aa6.75□□□□□ -1.33
SNF8YPL002C KAP122P32767 1081 aa6.75□□□□□ -1.33
SNF8YPL002C MET1P36150 593 aa6.75□□□□□ -1.33
SNF8YPL002C SLN1P39928 1220 aaPredicted RBP6.75□□□□□ -1.33
SNF8YPL002C VAN1P23642 535 aa6.74□□□□□ -1.33
SNF8YPL002C CPS1P27614 576 aa6.74□□□□□ -1.33
SNF8YPL002C SUV3P32580 737 aa6.74□□□□□ -1.33
SNF8YPL002C MET10P39692 1035 aa6.74□□□□□ -1.33
SNF8YPL002C PRK1P40494 810 aa6.74□□□□□ -1.33
SNF8YPL002C TSC11P40061 1430 aa6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms