RNA–Protein interactions for RNA: YOR060C

SLD7, Transcript of Protein with a role in chromosomal DNA replication, yeastyeast

Gene SLD7, Length 774 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD7YOR060C PEP7P32609 515 aa8.38□□□□□ -1.07
SLD7YOR060C SPC42P36094 363 aa8.38□□□□□ -1.07
SLD7YOR060C CIC1P38779 376 aaKnown RBP8.38□□□□□ -1.07
SLD7YOR060C HXT8P40886 569 aa8.38□□□□□ -1.07
SLD7YOR060C YGR122WP53272 402 aa8.38□□□□□ -1.07
SLD7YOR060C RSC4Q02206 625 aa8.38□□□□□ -1.07
SLD7YOR060C NMD2P38798 1089 aaKnown RBP8.37□□□□□ -1.07
SLD7YOR060C OXR1Q08952 273 aa8.37□□□□□ -1.07
SLD7YOR060C CYC8P14922 966 aa8.36□□□□□ -1.07
SLD7YOR060C DLD3P39976 496 aaKnown RBP8.35□□□□□ -1.07
SLD7YOR060C RTT106P40161 455 aa8.35□□□□□ -1.07
SLD7YOR060C YAF9P53930 226 aa8.35□□□□□ -1.07
SLD7YOR060C TOS4Q06266 489 aa8.35□□□□□ -1.07
SLD7YOR060C UTP4Q06679 776 aaKnown RBP8.35□□□□□ -1.07
SLD7YOR060C NOC3Q07896 663 aaPredicted RBP8.35□□□□□ -1.07
SLD7YOR060C LDH1P38139 375 aa8.34□□□□□ -1.07
SLD7YOR060C BSC2Q05611 235 aa8.34□□□□□ -1.07
SLD7YOR060C RAD2P07276 1031 aa8.33□□□□□ -1.08
SLD7YOR060C MNR2P35724 969 aa8.33□□□□□ -1.08
SLD7YOR060C RAD55P38953 406 aa8.33□□□□□ -1.08
SLD7YOR060C SSF2Q12153 453 aaPredicted RBP8.33□□□□□ -1.08
SLD7YOR060C Q0182Q9ZZW1 134 aa8.33□□□□□ -1.08
SLD7YOR060C PET112P33893 541 aa8.32□□□□□ -1.08
SLD7YOR060C YNL165WP53891 406 aa8.32□□□□□ -1.08
SLD7YOR060C HXK1P04806 485 aaKnown RBP8.31□□□□□ -1.08
SLD7YOR060C DYS1P38791 387 aa8.31□□□□□ -1.08
SLD7YOR060C FAA3P39002 694 aa8.31□□□□□ -1.08
SLD7YOR060C NTA1P40354 457 aa8.31□□□□□ -1.08
SLD7YOR060C RGD2P43556 714 aa8.31□□□□□ -1.08
SLD7YOR060C IOC3P43596 787 aa8.31□□□□□ -1.08
SLD7YOR060C SRP40P32583 406 aaPredicted RBP8.3□□□□□ -1.08
SLD7YOR060C YJL049WP47048 450 aa8.3□□□□□ -1.08
SLD7YOR060C RNH70P53331 553 aa8.3□□□□□ -1.08
SLD7YOR060C SRC1Q03707 834 aa8.3□□□□□ -1.08
SLD7YOR060C WRS1Q12109 432 aaKnown RBP8.3□□□□□ -1.08
SLD7YOR060C MSN1P22148 382 aa8.29□□□□□ -1.08
SLD7YOR060C MLF3P32047 452 aa8.29□□□□□ -1.08
SLD7YOR060C QDR2P40474 542 aa8.29□□□□□ -1.08
SLD7YOR060C RAS1P01119 309 aa8.28□□□□□ -1.08
SLD7YOR060C IRS4P36115 615 aaKnown RBP8.28□□□□□ -1.08
SLD7YOR060C TIF6Q12522 245 aaKnown RBP8.28□□□□□ -1.08
SLD7YOR060C YKL091CP33324 310 aaKnown RBP8.27□□□□□ -1.09
SLD7YOR060C FIR1P40020 876 aa8.27□□□□□ -1.09
SLD7YOR060C PSY2P40164 858 aa8.27□□□□□ -1.09
SLD7YOR060C ALA1P40825 983 aaKnown RBP8.27□□□□□ -1.09
SLD7YOR060C CWC24P53769 259 aa8.27□□□□□ -1.09
SLD7YOR060C HED1Q03937 162 aa8.27□□□□□ -1.09
SLD7YOR060C INP54Q08227 384 aaKnown RBP8.27□□□□□ -1.09
SLD7YOR060C FAR11P53917 953 aa8.26□□□□□ -1.09
SLD7YOR060C DAL4Q04895 635 aa8.26□□□□□ -1.09
SLD7YOR060C NSE3Q05541 303 aa8.26□□□□□ -1.09
SLD7YOR060C SSN3P39073 555 aa8.25□□□□□ -1.09
SLD7YOR060C CIT2P08679 460 aa8.24□□□□□ -1.09
SLD7YOR060C STI1P15705 589 aaKnown RBP RIP-Chip data8.24□□□□□ -1.09not detected
SLD7YOR060C PRP40P33203 583 aaKnown RBP8.24□□□□□ -1.09
SLD7YOR060C MRPS18P42847 217 aa8.24□□□□□ -1.09
SLD7YOR060C OSW7P43611 510 aa8.24□□□□□ -1.09
SLD7YOR060C JJJ2P46997 583 aa8.24□□□□□ -1.09
SLD7YOR060C YCS4Q06156 1176 aa8.24□□□□□ -1.09
SLD7YOR060C MCD1Q12158 566 aa8.24□□□□□ -1.09
SLD7YOR060C FLP1P03870 423 aa8.23□□□□□ -1.09
SLD7YOR060C PRE9P23638 258 aaKnown RBP8.23□□□□□ -1.09
SLD7YOR060C PPG1P32838 368 aa8.23□□□□□ -1.09
SLD7YOR060C YHL008CP38750 627 aa8.23□□□□□ -1.09
SLD7YOR060C MTO1P53070 669 aa8.23□□□□□ -1.09
SLD7YOR060C RPS31P05759 152 aaKnown RBP8.22□□□□□ -1.09
SLD7YOR060C KAP122P32767 1081 aa8.22□□□□□ -1.09
SLD7YOR060C RPN4Q03465 531 aa8.22□□□□□ -1.09
SLD7YOR060C SHM1P37292 490 aaPredicted RBP8.21□□□□□ -1.1
SLD7YOR060C ISW1P38144 1129 aa8.21□□□□□ -1.1
SLD7YOR060C YTA6P40328 754 aa8.21□□□□□ -1.1
SLD7YOR060C MSN5P52918 1224 aa8.21□□□□□ -1.1
SLD7YOR060C YOR296WQ08748 1289 aa8.21□□□□□ -1.1
SLD7YOR060C RPC31P17890 251 aa8.2□□□□□ -1.1
SLD7YOR060C AMS1P22855 1083 aa8.2□□□□□ -1.1
SLD7YOR060C GIP1P38229 639 aa8.2□□□□□ -1.1
SLD7YOR060C YBR287WP38355 427 aa8.2□□□□□ -1.1
SLD7YOR060C BSD2P38356 321 aa8.2□□□□□ -1.1
SLD7YOR060C ALG12P53730 551 aa8.2□□□□□ -1.1
SLD7YOR060C YPL109CQ02981 657 aa8.2□□□□□ -1.1
SLD7YOR060C BDF2Q07442 638 aa8.2□□□□□ -1.1
SLD7YOR060C CDC53Q12018 815 aaKnown RBP8.2□□□□□ -1.1
SLD7YOR060C MET32Q12041 191 aa8.2□□□□□ -1.1
SLD7YOR060C CDC34P14682 295 aa8.19□□□□□ -1.1
SLD7YOR060C KAR2P16474 682 aaKnown RBP8.19□□□□□ -1.1
SLD7YOR060C MCM5P29496 775 aaKnown RBP8.19□□□□□ -1.1
SLD7YOR060C RRP14P36080 434 aaKnown RBP8.19□□□□□ -1.1
SLD7YOR060C TAT2P38967 592 aa8.19□□□□□ -1.1
SLD7YOR060C FAA4P47912 694 aaKnown RBP8.19□□□□□ -1.1
SLD7YOR060C GDE1Q02979 1223 aa8.19□□□□□ -1.1
SLD7YOR060C BUD6P41697 788 aa8.18□□□□□ -1.1
SLD7YOR060C CTR9P89105 1077 aa8.18□□□□□ -1.1
SLD7YOR060C GRX1P25373 110 aaKnown RBP8.17□□□□□ -1.1
SLD7YOR060C IRE1P32361 1115 aa8.17□□□□□ -1.1
SLD7YOR060C NAB2P32505 525 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1 RIP-Chip
SLD7YOR060C UGA4P32837 571 aa8.17□□□□□ -1.1
SLD7YOR060C PBP2P38151 413 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
SLD7YOR060C FPR3P38911 411 aaKnown RBP8.17□□□□□ -1.1
SLD7YOR060C COBP00163 385 aa8.16□□□□□ -1.1
SLD7YOR060C AHP1P38013 176 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 103.9 ms