RNA–Protein interactions for RNA: YOR043W

WHI2, Transcript of Protein required for full activation of the general stress response, yeast

Gene WHI2, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
WHI2	YOR043W	SWI1	P09547	1314 aa		7.37	□□□□□ -1.23
WHI2	YOR043W	PRP40	P33203	583 aa	Known RBP	7.36	□□□□□ -1.23
WHI2	YOR043W	NMD2	P38798	1089 aa	Known RBP	7.36	□□□□□ -1.23
WHI2	YOR043W	RIM15	P43565	1770 aa		7.36	□□□□□ -1.23
WHI2	YOR043W	LPD1	P09624	499 aa	Known RBP	7.35	□□□□□ -1.23
WHI2	YOR043W	DMA1	P38823	416 aa		7.35	□□□□□ -1.23
WHI2	YOR043W	YMR074C	Q04773	145 aa		7.35	□□□□□ -1.23
WHI2	YOR043W	YPR204W	Q08995	1032 aa		7.35	□□□□□ -1.23
WHI2	YOR043W	PHM7	Q12252	991 aa		7.35	□□□□□ -1.23
WHI2	YOR043W	GCD7	P32502	381 aa	Predicted RBP	7.34	□□□□□ -1.23
WHI2	YOR043W	RFC1	P38630	861 aa	Known RBP	7.34	□□□□□ -1.23
WHI2	YOR043W	YJR008W	P47085	338 aa		7.34	□□□□□ -1.23
WHI2	YOR043W	MDG1	P53885	366 aa		7.34	□□□□□ -1.23
WHI2	YOR043W	NKP2	Q06162	153 aa		7.34	□□□□□ -1.23
WHI2	YOR043W	ARG8	P18544	423 aa		7.33	□□□□□ -1.24
WHI2	YOR043W	SER1	P33330	395 aa	Known RBP	7.33	□□□□□ -1.24
WHI2	YOR043W	UBP12	P39538	1254 aa		7.33	□□□□□ -1.24
WHI2	YOR043W	NPR2	P39923	615 aa		7.33	□□□□□ -1.24
WHI2	YOR043W	TEA1	P47988	759 aa		7.33	□□□□□ -1.24
WHI2	YOR043W	YGL082W	P53155	381 aa		7.33	□□□□□ -1.24
WHI2	YOR043W	PKH1	Q03407	766 aa		7.33	□□□□□ -1.24
WHI2	YOR043W	ECM16	Q04217	1267 aa	Known RBP	7.33	□□□□□ -1.24
WHI2	YOR043W	GLN1	P32288	370 aa	Known RBP	7.32	□□□□□ -1.24
WHI2	YOR043W	BDP1	P46678	594 aa		7.31	□□□□□ -1.24
WHI2	YOR043W	HGH1	P48362	394 aa	Known RBP	7.31	□□□□□ -1.24
WHI2	YOR043W	SET1	P38827	1080 aa	Known RBP	7.3	□□□□□ -1.24
WHI2	YOR043W	BRE2	P43132	505 aa		7.3	□□□□□ -1.24
WHI2	YOR043W	FCP1	Q03254	732 aa		7.3	□□□□□ -1.24
WHI2	YOR043W	NYV1	Q12255	253 aa		7.3	□□□□□ -1.24
WHI2	YOR043W	UBP1	P25037	809 aa		7.3	□□□□□ -1.24
WHI2	YOR043W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	7.3	□□□□□ -1.24	not detected
WHI2	YOR043W	GAR1	P28007	205 aa	Known RBP	7.3	□□□□□ -1.24
WHI2	YOR043W	MRF1	P30775	413 aa	Predicted RBP	7.3	□□□□□ -1.24
WHI2	YOR043W	HXT10	P43581	546 aa		7.3	□□□□□ -1.24
WHI2	YOR043W	ITC1	P53125	1264 aa		7.3	□□□□□ -1.24
WHI2	YOR043W	PSH1	Q12161	406 aa		7.3	□□□□□ -1.24
WHI2	YOR043W	LYS4	P49367	693 aa	Predicted RBP	7.29	□□□□□ -1.24
WHI2	YOR043W	RAD50	P12753	1312 aa		7.29	□□□□□ -1.24
WHI2	YOR043W	CDC16	P09798	840 aa		7.28	□□□□□ -1.24
WHI2	YOR043W	SSF1	P38789	453 aa	Predicted RBP	7.28	□□□□□ -1.24
WHI2	YOR043W	YIR014W	P40570	242 aa		7.28	□□□□□ -1.24
WHI2	YOR043W	NCB2	Q92317	146 aa		7.28	□□□□□ -1.24
WHI2	YOR043W	SUP35	P05453	685 aa	Known RBP	7.26	□□□□□ -1.25
WHI2	YOR043W	OPY1	P38271	328 aa		7.26	□□□□□ -1.25
WHI2	YOR043W	BUG1	Q12191	341 aa		7.26	□□□□□ -1.25
WHI2	YOR043W	SLA1	P32790	1244 aa		7.25	□□□□□ -1.25
WHI2	YOR043W	BRN1	P38170	754 aa		7.25	□□□□□ -1.25
WHI2	YOR043W	RMD1	Q03441	430 aa		7.25	□□□□□ -1.25
WHI2	YOR043W	MTC5	Q03897	1148 aa		7.25	□□□□□ -1.25
WHI2	YOR043W	CTI6	Q08923	506 aa		7.25	□□□□□ -1.25
WHI2	YOR043W	PDR18	P53756	1333 aa		7.24	□□□□□ -1.25
WHI2	YOR043W	NOT3	P06102	836 aa	Known RBP	7.24	□□□□□ -1.25
WHI2	YOR043W	VAS1	P07806	1104 aa	Known RBP	7.24	□□□□□ -1.25
WHI2	YOR043W	DLD1	P32891	587 aa		7.24	□□□□□ -1.25
WHI2	YOR043W	ECM21	P38167	1117 aa	Known RBP	7.24	□□□□□ -1.25
WHI2	YOR043W	GCR2	Q01722	534 aa		7.24	□□□□□ -1.25
WHI2	YOR043W	SNU66	Q12420	587 aa	Predicted RBP	7.24	□□□□□ -1.25
WHI2	YOR043W	AIR1	P40507	360 aa	Known RBP	7.24	□□□□□ -1.25
WHI2	YOR043W	YGL242C	P53066	181 aa		7.24	□□□□□ -1.25
WHI2	YOR043W	HAT1	Q12341	374 aa		7.24	□□□□□ -1.25
WHI2	YOR043W	UTP10	P42945	1769 aa	Known RBP	7.23	□□□□□ -1.25
WHI2	YOR043W	MLC1	P53141	149 aa		7.23	□□□□□ -1.25
WHI2	YOR043W	YLR326W	Q06170	240 aa	Known RBP	7.23	□□□□□ -1.25
WHI2	YOR043W	IME2	P32581	645 aa		7.22	□□□□□ -1.25
WHI2	YOR043W	KTR3	P38130	404 aa	Predicted RBP	7.22	□□□□□ -1.25
WHI2	YOR043W	CTH1	P47976	325 aa		7.22	□□□□□ -1.25
WHI2	YOR043W	UTP22	P53254	1237 aa	Predicted RBP	7.22	□□□□□ -1.25
WHI2	YOR043W	ALO1	P54783	526 aa	Known RBP	7.22	□□□□□ -1.25
WHI2	YOR043W	HXT13	P39924	564 aa		7.21	□□□□□ -1.26
WHI2	YOR043W	RAT1	Q02792	1006 aa	Known RBP	7.21	□□□□□ -1.26
WHI2	YOR043W	UBP16	Q02863	499 aa		7.21	□□□□□ -1.26
WHI2	YOR043W	BRE1	Q07457	700 aa	Known RBP	7.21	□□□□□ -1.26
WHI2	YOR043W	BUD20	Q08004	166 aa	Predicted RBP	7.21	□□□□□ -1.26
WHI2	YOR043W	RLF2	Q12495	606 aa		7.21	□□□□□ -1.26
WHI2	YOR043W	SSK22	P25390	1331 aa	Predicted RBP	7.2	□□□□□ -1.26
WHI2	YOR043W	SAC3	P46674	1301 aa		7.2	□□□□□ -1.26
WHI2	YOR043W	PRT1	P06103	763 aa	Known RBP	7.2	□□□□□ -1.26
WHI2	YOR043W	ERG12	P07277	443 aa		7.2	□□□□□ -1.26
WHI2	YOR043W	RPP1B	P10622	106 aa	Known RBP	7.2	□□□□□ -1.26
WHI2	YOR043W	PCT1	P13259	424 aa		7.2	□□□□□ -1.26
WHI2	YOR043W	SEC18	P18759	758 aa	Known RBP	7.2	□□□□□ -1.26
WHI2	YOR043W	VHR2	P40041	505 aa		7.2	□□□□□ -1.26
WHI2	YOR043W	ALD2	P47771	506 aa		7.2	□□□□□ -1.26
WHI2	YOR043W	MRPS35	P53292	345 aa		7.2	□□□□□ -1.26
WHI2	YOR043W	HXT17	P53631	564 aa		7.2	□□□□□ -1.26
WHI2	YOR043W	HPC2	Q01448	625 aa		7.2	□□□□□ -1.26
WHI2	YOR043W	FPR4	Q06205	392 aa	Predicted RBP	7.2	□□□□□ -1.26
WHI2	YOR043W	ALD3	P54114	506 aa		7.19	□□□□□ -1.26
WHI2	YOR043W	RIX7	Q07844	837 aa	Known RBP	7.19	□□□□□ -1.26
WHI2	YOR043W	RIM20	Q12033	661 aa		7.19	□□□□□ -1.26
WHI2	YOR043W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	7.18	□□□□□ -1.26	not detected
WHI2	YOR043W	YBL086C	P38177	466 aa		7.18	□□□□□ -1.26
WHI2	YOR043W	CLA4	P48562	842 aa		7.18	□□□□□ -1.26
WHI2	YOR043W	PIB2	P53191	635 aa		7.18	□□□□□ -1.26
WHI2	YOR043W	YNL193W	P53870	558 aa		7.18	□□□□□ -1.26
WHI2	YOR043W	SSA2	P10592	639 aa	Known RBP	7.17	□□□□□ -1.26
WHI2	YOR043W	KTR1	P27810	393 aa	Known RBP	7.17	□□□□□ -1.26
WHI2	YOR043W	NGR1	P32831	672 aa	Known RBP	7.17	□□□□□ -1.26
WHI2	YOR043W	UBP14	P38237	781 aa	Known RBP	7.17	□□□□□ -1.26
WHI2	YOR043W	TOS1	P38288	455 aa		7.17	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 93.1 ms