RNA–Protein interactions for RNA: YOL116W

MSN1, Transcript of Transcriptional activator, yeastyeast

Gene MSN1, Length 1,149 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN1YOL116W PNP1Q05788 311 aa5.45□□□□□ -1.54
MSN1YOL116W ALD2P47771 506 aa5.44□□□□□ -1.54
MSN1YOL116W FOX2Q02207 900 aaKnown RBP5.44□□□□□ -1.54
MSN1YOL116W MRPL33P20084 86 aa5.43□□□□□ -1.54
MSN1YOL116W FUR4P05316 633 aaKnown RBP5.42□□□□□ -1.54
MSN1YOL116W ISC10P32645 267 aa5.42□□□□□ -1.54
MSN1YOL116W LDH1P38139 375 aa5.42□□□□□ -1.54
MSN1YOL116W NCL1P38205 684 aaKnown RBP5.42□□□□□ -1.54
MSN1YOL116W YBR287WP38355 427 aa5.42□□□□□ -1.54
MSN1YOL116W DYS1P38791 387 aa5.42□□□□□ -1.54
MSN1YOL116W QDR2P40474 542 aa5.42□□□□□ -1.54
MSN1YOL116W VMA3P25515 160 aa5.41□□□□□ -1.54
MSN1YOL116W SKP1P52286 194 aa5.41□□□□□ -1.54
MSN1YOL116W HEH2Q03281 663 aa5.41□□□□□ -1.54
MSN1YOL116W MDJ1P35191 511 aa5.4□□□□□ -1.54
MSN1YOL116W GEF1P37020 779 aa5.4□□□□□ -1.54
MSN1YOL116W CUS1Q02554 436 aaPredicted RBP5.4□□□□□ -1.54
MSN1YOL116W APM2P38700 605 aa5.39□□□□□ -1.55
MSN1YOL116W FIR1P40020 876 aa5.39□□□□□ -1.55
MSN1YOL116W AI1P03875 834 aa5.38□□□□□ -1.55
MSN1YOL116W RPC31P17890 251 aa5.38□□□□□ -1.55
MSN1YOL116W CDC3P32457 520 aaKnown RBP5.38□□□□□ -1.55
MSN1YOL116W KOG1P38873 1557 aa5.38□□□□□ -1.55
MSN1YOL116W ISW1P38144 1129 aa5.37□□□□□ -1.55
MSN1YOL116W GIP1P38229 639 aa5.37□□□□□ -1.55
MSN1YOL116W TY1A-DR2Q03964 440 aaKnown RBP5.37□□□□□ -1.55
MSN1YOL116W LSO1Q3E827 93 aa5.37□□□□□ -1.55
MSN1YOL116W GPM1P00950 247 aaKnown RBP5.36□□□□□ -1.55
MSN1YOL116W TPS3P38426 1054 aaKnown RBP5.36□□□□□ -1.55
MSN1YOL116W KAR5Q04746 504 aa5.36□□□□□ -1.55
MSN1YOL116W YOR296WQ08748 1289 aa5.36□□□□□ -1.55
MSN1YOL116W KNS1P32350 737 aaPredicted RBP5.35□□□□□ -1.55
MSN1YOL116W MET1P36150 593 aa5.35□□□□□ -1.55
MSN1YOL116W HXT8P40886 569 aa5.35□□□□□ -1.55
MSN1YOL116W CCT8P47079 568 aaKnown RBP5.35□□□□□ -1.55
MSN1YOL116W NSG2P53898 299 aa5.35□□□□□ -1.55
MSN1YOL116W MSC7P38694 644 aa5.34□□□□□ -1.55
MSN1YOL116W THI72Q08579 599 aa5.34□□□□□ -1.55
MSN1YOL116W APC11Q12157 165 aa5.34□□□□□ -1.55
MSN1YOL116W TCB3Q03640 1545 aaKnown RBP5.33□□□□□ -1.56
MSN1YOL116W PDC5P16467 563 aaKnown RBP5.33□□□□□ -1.56
MSN1YOL116W SMC1P32908 1225 aa5.33□□□□□ -1.56
MSN1YOL116W YNR040WP53736 256 aa5.33□□□□□ -1.56
MSN1YOL116W MSN1P22148 382 aa5.32□□□□□ -1.56
MSN1YOL116W BOL3P39724 118 aa5.32□□□□□ -1.56
MSN1YOL116W SUT1P53032 299 aaKnown RBP5.32□□□□□ -1.56
MSN1YOL116W RSC2Q06488 889 aa5.32□□□□□ -1.56
MSN1YOL116W TY1B-DR4Q07793 1604 aa5.32□□□□□ -1.56
MSN1YOL116W GLO3P38682 493 aaKnown RBP5.31□□□□□ -1.56
MSN1YOL116W YER156CP40093 338 aaKnown RBP5.31□□□□□ -1.56
MSN1YOL116W ITC1P53125 1264 aa5.31□□□□□ -1.56
MSN1YOL116W YNR014WP53719 212 aa5.31□□□□□ -1.56
MSN1YOL116W SGS1P35187 1447 aa5.31□□□□□ -1.56
MSN1YOL116W BOI1P38041 980 aaKnown RBP5.3□□□□□ -1.56
MSN1YOL116W BSD2P38356 321 aa5.3□□□□□ -1.56
MSN1YOL116W BOI2P39969 1040 aa5.3□□□□□ -1.56
MSN1YOL116W PRK1P40494 810 aa5.3□□□□□ -1.56
MSN1YOL116W ACF4P47129 309 aa5.3□□□□□ -1.56
MSN1YOL116W ATG1P53104 897 aa5.3□□□□□ -1.56
MSN1YOL116W NAB2P32505 525 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
MSN1YOL116W AIM46P38885 310 aa5.29□□□□□ -1.56
MSN1YOL116W NTA1P40354 457 aa5.29□□□□□ -1.56
MSN1YOL116W YIL165CP40446 119 aa5.29□□□□□ -1.56
MSN1YOL116W QDR1P40475 563 aa5.29□□□□□ -1.56
MSN1YOL116W YFL066CP43538 392 aa5.29□□□□□ -1.56
MSN1YOL116W HAT1Q12341 374 aa5.29□□□□□ -1.56
MSN1YOL116W IDI1P15496 288 aa5.28□□□□□ -1.56
MSN1YOL116W RAD55P38953 406 aa5.28□□□□□ -1.56
MSN1YOL116W UFD2P54860 961 aa5.28□□□□□ -1.56
MSN1YOL116W SBP1P10080 294 aaKnown RBP5.27□□□□□ -1.57
MSN1YOL116W IRS4P36115 615 aaKnown RBP5.27□□□□□ -1.57
MSN1YOL116W ALG14P38242 237 aa5.27□□□□□ -1.57
MSN1YOL116W NHA1Q99271 985 aa5.27□□□□□ -1.57
MSN1YOL116W RPB10P22139 70 aa5.26□□□□□ -1.57
MSN1YOL116W SBE2P42223 864 aaKnown RBP5.26□□□□□ -1.57
MSN1YOL116W RGD2P43556 714 aa5.26□□□□□ -1.57
MSN1YOL116W EMG1Q06287 252 aaKnown RBP5.26□□□□□ -1.57
MSN1YOL116W YBL113CQ7M4S9 792 aa5.26□□□□□ -1.57
MSN1YOL116W PGM2P37012 569 aaKnown RBP5.25□□□□□ -1.57
MSN1YOL116W MCX1P38323 520 aaPredicted RBP5.25□□□□□ -1.57
MSN1YOL116W PPT1P53043 513 aa5.25□□□□□ -1.57
MSN1YOL116W YMR187CQ03236 431 aa5.25□□□□□ -1.57
MSN1YOL116W TDA6Q06466 467 aa5.25□□□□□ -1.57
MSN1YOL116W SLP1Q12232 587 aa5.25□□□□□ -1.57
MSN1YOL116W YPR053CQ6Q5F3 151 aa5.25□□□□□ -1.57
MSN1YOL116W TRL1P09880 827 aaKnown RBP5.24□□□□□ -1.57
MSN1YOL116W GRS1P38088 690 aaKnown RBP5.24□□□□□ -1.57
MSN1YOL116W ERP5P38819 212 aa5.24□□□□□ -1.57
MSN1YOL116W PSY2P40164 858 aa5.24□□□□□ -1.57
MSN1YOL116W KTR2P33550 425 aa5.23□□□□□ -1.57
MSN1YOL116W YJL181WP46987 611 aa5.23□□□□□ -1.57
MSN1YOL116W TRS120Q04183 1289 aa5.23□□□□□ -1.57
MSN1YOL116W GIS4Q04233 774 aa5.23□□□□□ -1.57
MSN1YOL116W TIF6Q12522 245 aaKnown RBP5.23□□□□□ -1.57
MSN1YOL116W NAR1P23503 491 aaKnown RBP5.22□□□□□ -1.57
MSN1YOL116W ECM2P38241 364 aaKnown RBP5.22□□□□□ -1.57
MSN1YOL116W LEM3P42838 414 aa5.22□□□□□ -1.57
MSN1YOL116W YNL011CP53980 444 aa5.22□□□□□ -1.57
MSN1YOL116W INP51P40559 946 aaKnown RBP5.21□□□□□ -1.58
MSN1YOL116W GUP1P53154 560 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 83 ms