RNA–Protein interactions for RNA: YOL004W

SIN3, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene SIN3, Length 4,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIN3YOL004W YRF1-8P0CX22 1796 aa3.7□□□□□ -1.82
SIN3YOL004W USO1P25386 1790 aa3.7□□□□□ -1.82
SIN3YOL004W SPO74P45819 413 aa3.7□□□□□ -1.82
SIN3YOL004W SNU71P53207 620 aaKnown RBP3.7□□□□□ -1.82
SIN3YOL004W YMR265CQ03508 461 aaKnown RBP3.7□□□□□ -1.82
SIN3YOL004W PTC4P38089 393 aa3.69□□□□□ -1.82
SIN3YOL004W YNR021WP53723 404 aaKnown RBP3.69□□□□□ -1.82
SIN3YOL004W OSH2Q12451 1283 aa3.69□□□□□ -1.82
SIN3YOL004W RTP1Q12751 981 aa3.69□□□□□ -1.82
SIN3YOL004W GAP1P19145 602 aaPredicted RBP3.69□□□□□ -1.82
SIN3YOL004W NIT1P40447 199 aa3.69□□□□□ -1.82
SIN3YOL004W NUP188P52593 1655 aaKnown RBP3.69□□□□□ -1.82
SIN3YOL004W PUP3P25451 205 aaKnown RBP3.69□□□□□ -1.82
SIN3YOL004W SLX8P40072 274 aa3.69□□□□□ -1.82
SIN3YOL004W YRB30P53107 440 aaPredicted RBP3.69□□□□□ -1.82
SIN3YOL004W IMP4P53941 290 aaKnown RBP3.69□□□□□ -1.82
SIN3YOL004W PER1P25625 357 aa3.69□□□□□ -1.82
SIN3YOL004W SEC20P28791 383 aa3.69□□□□□ -1.82
SIN3YOL004W MIC60P36112 540 aa3.69□□□□□ -1.82
SIN3YOL004W TLG2Q08144 397 aa3.69□□□□□ -1.82
SIN3YOL004W CFT2Q12102 859 aaPredicted RBP3.69□□□□□ -1.82
SIN3YOL004W YDR338CQ05497 695 aa3.68□□□□□ -1.82
SIN3YOL004W YLR271WQ06152 274 aa3.68□□□□□ -1.82
SIN3YOL004W BRN1P38170 754 aa3.68□□□□□ -1.82
SIN3YOL004W YML053CQ04978 212 aa3.68□□□□□ -1.82
SIN3YOL004W DPL1Q05567 589 aa3.68□□□□□ -1.82
SIN3YOL004W SSP2Q08646 371 aa3.68□□□□□ -1.82
SIN3YOL004W YBL036CP38197 257 aa3.67□□□□□ -1.82
SIN3YOL004W RPN8Q08723 338 aaKnown RBP3.67□□□□□ -1.82
SIN3YOL004W GPR1Q12361 961 aa3.67□□□□□ -1.82
SIN3YOL004W CCP1P00431 361 aa3.67□□□□□ -1.82
SIN3YOL004W TPD3P31383 635 aa3.67□□□□□ -1.82
SIN3YOL004W BFA1P47113 574 aa3.67□□□□□ -1.82
SIN3YOL004W CTF4Q01454 927 aa3.67□□□□□ -1.82
SIN3YOL004W YKR075CP36155 307 aa3.67□□□□□ -1.82
SIN3YOL004W GEF1P37020 779 aa3.67□□□□□ -1.82
SIN3YOL004W RPL34BP40525 121 aaKnown RBP3.67□□□□□ -1.82
SIN3YOL004W RGT1P32862 1170 aa3.67□□□□□ -1.82
SIN3YOL004W ESL2P36168 1195 aa3.67□□□□□ -1.82
SIN3YOL004W SUB2Q07478 446 aaKnown RBP3.67□□□□□ -1.82
SIN3YOL004W HOM2P13663 365 aaKnown RBP3.66□□□□□ -1.82
SIN3YOL004W OXP1P28273 1286 aa3.66□□□□□ -1.82
SIN3YOL004W SET1P38827 1080 aaKnown RBP3.66□□□□□ -1.82
SIN3YOL004W MDM1Q01846 1127 aa3.66□□□□□ -1.82
SIN3YOL004W CET1O13297 549 aaPredicted RBP3.66□□□□□ -1.82
SIN3YOL004W CDC19P00549 500 aaKnown RBP3.66□□□□□ -1.82
SIN3YOL004W MRPL7P36519 292 aa3.66□□□□□ -1.82
SIN3YOL004W RSM7P47150 247 aa3.66□□□□□ -1.82
SIN3YOL004W DAN4P47179 1161 aa3.66□□□□□ -1.82
SIN3YOL004W ATF2P53296 535 aa3.66□□□□□ -1.82
SIN3YOL004W IOC4Q04213 475 aa3.66□□□□□ -1.82
SIN3YOL004W LEU2P04173 364 aaPredicted RBP3.66□□□□□ -1.82
SIN3YOL004W MDM20Q12387 796 aaKnown RBP3.66□□□□□ -1.82
SIN3YOL004W BRL1P38770 471 aa3.65□□□□□ -1.82
SIN3YOL004W MSB3P48566 633 aaPredicted RBP3.65□□□□□ -1.82
SIN3YOL004W GYL1Q04322 720 aa3.65□□□□□ -1.82
SIN3YOL004W LCD1Q04377 747 aa3.65□□□□□ -1.82
SIN3YOL004W MAK21Q12176 1025 aaKnown RBP3.65□□□□□ -1.82
SIN3YOL004W GCN2P15442 1659 aa3.65□□□□□ -1.82
SIN3YOL004W PPE1P38796 400 aa3.65□□□□□ -1.83
SIN3YOL004W AOS1Q06624 347 aa3.65□□□□□ -1.83
SIN3YOL004W CTI6Q08923 506 aa3.65□□□□□ -1.83
SIN3YOL004W YRF1-2P40105 1681 aa3.65□□□□□ -1.83
SIN3YOL004W PES4P39684 611 aa3.64□□□□□ -1.83
SIN3YOL004W MET13P53128 600 aa3.64□□□□□ -1.83
SIN3YOL004W SUR7P54003 302 aa3.64□□□□□ -1.83
SIN3YOL004W CAN1P04817 590 aa3.64□□□□□ -1.83
SIN3YOL004W BUD27P43573 796 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
SIN3YOL004W CAB1Q04430 367 aa3.64□□□□□ -1.83
SIN3YOL004W PIG1Q06216 648 aa3.64□□□□□ -1.83
SIN3YOL004W PKC1P24583 1151 aa3.64□□□□□ -1.83
SIN3YOL004W TAF1P46677 1066 aa3.64□□□□□ -1.83
SIN3YOL004W RPL34AP87262 121 aaPredicted RBP3.64□□□□□ -1.83
SIN3YOL004W TUS1Q06412 1307 aa3.64□□□□□ -1.83
SIN3YOL004W NSE5Q03718 556 aa3.64□□□□□ -1.83
SIN3YOL004W PBS2P08018 668 aa3.63□□□□□ -1.83
SIN3YOL004W APN2P38207 520 aa3.63□□□□□ -1.83
SIN3YOL004W MSD1P15179 658 aaKnown RBP3.63□□□□□ -1.83
SIN3YOL004W MRF1P30775 413 aaPredicted RBP3.63□□□□□ -1.83
SIN3YOL004W SEC8P32855 1065 aa3.63□□□□□ -1.83
SIN3YOL004W MPP10P47083 593 aaKnown RBP3.63□□□□□ -1.83
SIN3YOL004W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
SIN3YOL004W TOR1P35169 2470 aa3.63□□□□□ -1.83
SIN3YOL004W PGA3Q12746 312 aaKnown RBP3.63□□□□□ -1.83
SIN3YOL004W RAD54P32863 898 aa3.63□□□□□ -1.83
SIN3YOL004W GRS1P38088 690 aaKnown RBP3.63□□□□□ -1.83
SIN3YOL004W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
SIN3YOL004W SYF1Q04048 859 aaPredicted RBP3.63□□□□□ -1.83
SIN3YOL004W ALD5P40047 520 aaKnown RBP3.62□□□□□ -1.83
SIN3YOL004W FAF1P40546 346 aaPredicted RBP3.62□□□□□ -1.83
SIN3YOL004W ALT2P52892 507 aa3.62□□□□□ -1.83
SIN3YOL004W FAR10Q06001 478 aa3.62□□□□□ -1.83
SIN3YOL004W RPS8AP0CX39 200 aaKnown RBP3.62□□□□□ -1.83
SIN3YOL004W RPS8BP0CX40 200 aaKnown RBP3.62□□□□□ -1.83
SIN3YOL004W DIT2P21595 489 aa3.62□□□□□ -1.83
SIN3YOL004W FUB1P25659 250 aa3.62□□□□□ -1.83
SIN3YOL004W HAP4P14064 554 aa3.62□□□□□ -1.83
SIN3YOL004W TEA1P47988 759 aa3.62□□□□□ -1.83
SIN3YOL004W SUB1P54000 292 aaKnown RBP3.62□□□□□ -1.83
SIN3YOL004W THI22Q06490 572 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms