RNA–Protein interactions for RNA: YNR015W

SMM1, Transcript of Dihydrouridine synthase, yeast

Gene SMM1, Length 1,155 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMM1	YNR015W	GAP1	P19145	602 aa	Predicted RBP	11.3	□□□□□ -0.6
SMM1	YNR015W	GLO3	P38682	493 aa	Known RBP	11.3	□□□□□ -0.6
SMM1	YNR015W	GSM1	P42950	618 aa		11.3	□□□□□ -0.6
SMM1	YNR015W	PRP42	Q03776	544 aa	Known RBP	11.3	□□□□□ -0.6
SMM1	YNR015W	PUS5	Q06244	254 aa		11.3	□□□□□ -0.6
SMM1	YNR015W	TOS4	Q06266	489 aa		11.3	□□□□□ -0.6
SMM1	YNR015W	RRG1	Q12167	365 aa	Predicted RBP	11.3	□□□□□ -0.6
SMM1	YNR015W	YLR278C	Q05854	1341 aa		11.3	□□□□□ -0.6
SMM1	YNR015W	THS1	P04801	734 aa	Known RBP	11.29	□□□□□ -0.6
SMM1	YNR015W	GLC3	P32775	704 aa		11.29	□□□□□ -0.6
SMM1	YNR015W	AFG2	P32794	780 aa		11.29	□□□□□ -0.6
SMM1	YNR015W	HAL5	P38970	855 aa	Known RBP	11.29	□□□□□ -0.6
SMM1	YNR015W	NCB2	Q92317	146 aa		11.29	□□□□□ -0.6
SMM1	YNR015W	DUR1,2	P32528	1835 aa	Known RBP	11.29	□□□□□ -0.6
SMM1	YNR015W	RTG2	P32608	588 aa	Known RBP	11.28	□□□□□ -0.6
SMM1	YNR015W	NMD2	P38798	1089 aa	Known RBP	11.28	□□□□□ -0.6
SMM1	YNR015W	YNL193W	P53870	558 aa		11.28	□□□□□ -0.6
SMM1	YNR015W	RPN7	Q06103	429 aa	Known RBP	11.28	□□□□□ -0.6
SMM1	YNR015W	FIG2	P25653	1609 aa		11.27	□□□□□ -0.6
SMM1	YNR015W	KTR3	P38130	404 aa	Predicted RBP	11.27	□□□□□ -0.61
SMM1	YNR015W	PEX21	P50091	288 aa		11.27	□□□□□ -0.61
SMM1	YNR015W	YGL242C	P53066	181 aa		11.27	□□□□□ -0.61
SMM1	YNR015W	WRS1	Q12109	432 aa	Known RBP	11.27	□□□□□ -0.61
SMM1	YNR015W	PSF3	Q12146	194 aa		11.27	□□□□□ -0.61
SMM1	YNR015W	SSA4	P22202	642 aa	Known RBP	11.26	□□□□□ -0.61
SMM1	YNR015W	OXP1	P28273	1286 aa		11.26	□□□□□ -0.61
SMM1	YNR015W	FPR3	P38911	411 aa	Known RBP	11.26	□□□□□ -0.61
SMM1	YNR015W	FET4	P40988	552 aa		11.26	□□□□□ -0.61
SMM1	YNR015W	YGR117C	P53270	476 aa		11.26	□□□□□ -0.61
SMM1	YNR015W	TRM44	Q02648	567 aa	Known RBP	11.26	□□□□□ -0.61
SMM1	YNR015W	CRF1	Q04930	467 aa		11.26	□□□□□ -0.61
SMM1	YNR015W	ARG82	P07250	355 aa		11.25	□□□□□ -0.61
SMM1	YNR015W	YFH7	P43591	353 aa		11.25	□□□□□ -0.61
SMM1	YNR015W	JJJ2	P46997	583 aa		11.25	□□□□□ -0.61
SMM1	YNR015W	RRI2	Q12348	645 aa		11.25	□□□□□ -0.61
SMM1	YNR015W	RPT3	P33298	428 aa	Known RBP	11.24	□□□□□ -0.61
SMM1	YNR015W	TIM50	Q02776	476 aa		11.24	□□□□□ -0.61
SMM1	YNR015W	FLO11	P08640	1367 aa		11.24	□□□□□ -0.61
SMM1	YNR015W	NOT3	P06102	836 aa	Known RBP	11.23	□□□□□ -0.61
SMM1	YNR015W	PIF1	P07271	859 aa		11.23	□□□□□ -0.61
SMM1	YNR015W	BDP1	P46678	594 aa		11.23	□□□□□ -0.61
SMM1	YNR015W	VPS4	P52917	437 aa		11.23	□□□□□ -0.61
SMM1	YNR015W	ALO1	P54783	526 aa	Known RBP	11.23	□□□□□ -0.61
SMM1	YNR015W	RPS7A	P26786	190 aa	Known RBP	11.22	□□□□□ -0.61
SMM1	YNR015W	STV1	P37296	890 aa		11.22	□□□□□ -0.61
SMM1	YNR015W	YIR042C	P40586	236 aa		11.22	□□□□□ -0.61
SMM1	YNR015W	MLC1	P53141	149 aa		11.22	□□□□□ -0.61
SMM1	YNR015W	INM2	Q05533	292 aa		11.22	□□□□□ -0.61
SMM1	YNR015W	ECM21	P38167	1117 aa	Known RBP	11.21	□□□□□ -0.61
SMM1	YNR015W	RFC1	P38630	861 aa	Known RBP	11.21	□□□□□ -0.61
SMM1	YNR015W	ACK1	Q07622	623 aa	Predicted RBP	11.21	□□□□□ -0.61
SMM1	YNR015W	AIM7	Q12156	149 aa		11.21	□□□□□ -0.61
SMM1	YNR015W	CDC16	P09798	840 aa		11.2	□□□□□ -0.62
SMM1	YNR015W	HPR1	P17629	752 aa	Known RBP	11.2	□□□□□ -0.62
SMM1	YNR015W	EMP47	P43555	445 aa		11.2	□□□□□ -0.62
SMM1	YNR015W	PDR18	P53756	1333 aa		11.19	□□□□□ -0.62
SMM1	YNR015W	SNF3	P10870	884 aa		11.18	□□□□□ -0.62
SMM1	YNR015W	PTK1	P36002	662 aa	Predicted RBP	11.18	□□□□□ -0.62
SMM1	YNR015W	UTP7	P40055	554 aa	Known RBP	11.18	□□□□□ -0.62
SMM1	YNR015W	YJL171C	P46992	396 aa		11.18	□□□□□ -0.62
SMM1	YNR015W	MTC3	P53077	123 aa		11.18	□□□□□ -0.62
SMM1	YNR015W	PUS6	P53294	404 aa		11.18	□□□□□ -0.62
SMM1	YNR015W	VHR2	P40041	505 aa		11.17	□□□□□ -0.62
SMM1	YNR015W	UBP10	P53874	792 aa	Predicted RBP	11.17	□□□□□ -0.62
SMM1	YNR015W	SEN54	Q02825	467 aa	Predicted RBP	11.17	□□□□□ -0.62
SMM1	YNR015W	CYB2	P00175	591 aa		11.16	□□□□□ -0.62
SMM1	YNR015W	GRX7	P38068	203 aa		11.16	□□□□□ -0.62
SMM1	YNR015W	EPS1	P40557	701 aa		11.16	□□□□□ -0.62
SMM1	YNR015W	PIB2	P53191	635 aa		11.16	□□□□□ -0.62
SMM1	YNR015W	NKP2	Q06162	153 aa		11.16	□□□□□ -0.62
SMM1	YNR015W	PEA2	P40091	420 aa		11.15	□□□□□ -0.62
SMM1	YNR015W	MRPS35	P53292	345 aa		11.15	□□□□□ -0.62
SMM1	YNR015W	RMD1	Q03441	430 aa		11.15	□□□□□ -0.62
SMM1	YNR015W	ECM16	Q04217	1267 aa	Known RBP	11.15	□□□□□ -0.62
SMM1	YNR015W	TOM1	Q03280	3268 aa		11.14	□□□□□ -0.63
SMM1	YNR015W	CBP1	P07252	654 aa		11.14	□□□□□ -0.63
SMM1	YNR015W	APL6	P46682	809 aa		11.14	□□□□□ -0.63
SMM1	YNR015W	MDL2	P33311	773 aa		11.13	□□□□□ -0.63
SMM1	YNR015W	BOI1	P38041	980 aa	Known RBP	11.13	□□□□□ -0.63
SMM1	YNR015W	BRE1	Q07457	700 aa	Known RBP	11.13	□□□□□ -0.63
SMM1	YNR015W	MAP2	P38174	421 aa	Known RBP	11.12	□□□□□ -0.63
SMM1	YNR015W	NSG2	P53898	299 aa		11.12	□□□□□ -0.63
SMM1	YNR015W	CWC15	Q03772	175 aa	Known RBP	11.12	□□□□□ -0.63
SMM1	YNR015W	NPL4	P33755	580 aa		11.11	□□□□□ -0.63
SMM1	YNR015W	PBY1	P38254	753 aa		11.11	□□□□□ -0.63
SMM1	YNR015W	YIL089W	P40500	205 aa		11.11	□□□□□ -0.63
SMM1	YNR015W	KTR1	P27810	393 aa	Known RBP	11.1	□□□□□ -0.63
SMM1	YNR015W	GEF1	P37020	779 aa		11.09	□□□□□ -0.63
SMM1	YNR015W	YMR147W	P40218	223 aa	Known RBP	11.09	□□□□□ -0.63
SMM1	YNR015W	NIT1	P40447	199 aa		11.09	□□□□□ -0.63
SMM1	YNR015W	BBC1	P47068	1157 aa		11.09	□□□□□ -0.63
SMM1	YNR015W	PKH3	Q03306	898 aa	Predicted RBP	11.09	□□□□□ -0.63
SMM1	YNR015W	KAR5	Q04746	504 aa		11.09	□□□□□ -0.63
SMM1	YNR015W	RAD50	P12753	1312 aa		11.09	□□□□□ -0.63
SMM1	YNR015W	OSH3	P38713	996 aa	Known RBP	11.08	□□□□□ -0.64
SMM1	YNR015W	IOC3	P43596	787 aa		11.08	□□□□□ -0.64
SMM1	YNR015W	PIP2	P52960	996 aa		11.08	□□□□□ -0.64
SMM1	YNR015W	TYW1	Q08960	810 aa	Known RBP	11.08	□□□□□ -0.64
SMM1	YNR015W	NOP2	P40991	618 aa	Known RBP	11.07	□□□□□ -0.64
SMM1	YNR015W	IRC8	P47046	822 aa		11.07	□□□□□ -0.64

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms