RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A YLR346CQ06139 101 aa5.98□□□□□ -1.45
YSF3YNL138W-A MCM1P11746 286 aa5.97□□□□□ -1.45
YSF3YNL138W-A DAL1P32375 460 aa5.97□□□□□ -1.45
YSF3YNL138W-A YDR444WQ04093 687 aa5.97□□□□□ -1.45
YSF3YNL138W-A TY1A-DR3Q12441 440 aa5.97□□□□□ -1.45
YSF3YNL138W-A YPK9Q12697 1472 aa5.96□□□□□ -1.45
YSF3YNL138W-A CDC3P32457 520 aaKnown RBP5.96□□□□□ -1.46
YSF3YNL138W-A SLA1P32790 1244 aa5.96□□□□□ -1.46
YSF3YNL138W-A SHM1P37292 490 aaPredicted RBP5.96□□□□□ -1.46
YSF3YNL138W-A GLY1P37303 387 aaKnown RBP5.96□□□□□ -1.46
YSF3YNL138W-A ALD4P46367 519 aaKnown RBP5.96□□□□□ -1.46
YSF3YNL138W-A JJJ2P46997 583 aa5.96□□□□□ -1.46
YSF3YNL138W-A CWH41P53008 833 aa5.96□□□□□ -1.46
YSF3YNL138W-A YNL165WP53891 406 aa5.96□□□□□ -1.46
YSF3YNL138W-A UBP2Q01476 1272 aa5.96□□□□□ -1.46
YSF3YNL138W-A PNP1Q05788 311 aa5.96□□□□□ -1.46
YSF3YNL138W-A LCB5Q06147 687 aaKnown RBP5.96□□□□□ -1.46
YSF3YNL138W-A SRS2P12954 1174 aa5.95□□□□□ -1.46
YSF3YNL138W-A VTC4P47075 721 aa5.95□□□□□ -1.46
YSF3YNL138W-A VPS15P22219 1454 aa5.95□□□□□ -1.46
YSF3YNL138W-A RPS31P05759 152 aaKnown RBP5.94□□□□□ -1.46
YSF3YNL138W-A GAR1P28007 205 aaKnown RBP5.94□□□□□ -1.46
YSF3YNL138W-A AHP1P38013 176 aaKnown RBP5.94□□□□□ -1.46
YSF3YNL138W-A HXT5P38695 592 aa5.94□□□□□ -1.46
YSF3YNL138W-A SCW11P53189 542 aa5.94□□□□□ -1.46
YSF3YNL138W-A FOX2Q02207 900 aaKnown RBP5.94□□□□□ -1.46
YSF3YNL138W-A TY1A-BLQ12266 440 aa5.94□□□□□ -1.46
YSF3YNL138W-A Q0182Q9ZZW1 134 aa5.94□□□□□ -1.46
YSF3YNL138W-A CDC19P00549 500 aaKnown RBP5.93□□□□□ -1.46
YSF3YNL138W-A IRE1P32361 1115 aa5.93□□□□□ -1.46
YSF3YNL138W-A YBR197CP38306 217 aa5.93□□□□□ -1.46
YSF3YNL138W-A OSH7P38755 437 aa5.93□□□□□ -1.46
YSF3YNL138W-A CAB1Q04430 367 aa5.93□□□□□ -1.46
YSF3YNL138W-A TY1B-DR3Q99231 1755 aa5.93□□□□□ -1.46
YSF3YNL138W-A GBP2P25555 427 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
YSF3YNL138W-A MLF3P32047 452 aa5.91□□□□□ -1.46
YSF3YNL138W-A ISC10P32645 267 aa5.91□□□□□ -1.46
YSF3YNL138W-A BOL3P39724 118 aa5.91□□□□□ -1.46
YSF3YNL138W-A NAM8Q00539 523 aaKnown RBP5.91□□□□□ -1.46
YSF3YNL138W-A PSH1Q12161 406 aa5.91□□□□□ -1.46
YSF3YNL138W-A HAT1Q12341 374 aa5.91□□□□□ -1.46
YSF3YNL138W-A KAR5Q04746 504 aa5.9□□□□□ -1.46
YSF3YNL138W-A PDC6P26263 563 aaKnown RBP5.89□□□□□ -1.47
YSF3YNL138W-A SCD5P34758 872 aa5.89□□□□□ -1.47
YSF3YNL138W-A FUR4P05316 633 aaKnown RBP5.88□□□□□ -1.47
YSF3YNL138W-A BOI1P38041 980 aaKnown RBP5.88□□□□□ -1.47
YSF3YNL138W-A RGA1P39083 1007 aa5.88□□□□□ -1.47
YSF3YNL138W-A YTA6P40328 754 aa5.88□□□□□ -1.47
YSF3YNL138W-A UBP15P50101 1230 aa5.88□□□□□ -1.47
YSF3YNL138W-A CAF120P53836 1060 aa5.88□□□□□ -1.47
YSF3YNL138W-A TRM732Q03496 1420 aa5.88□□□□□ -1.47
YSF3YNL138W-A MRPL33P20084 86 aa5.87□□□□□ -1.47
YSF3YNL138W-A RRN6P32786 894 aa5.87□□□□□ -1.47
YSF3YNL138W-A NUP159P40477 1460 aa5.87□□□□□ -1.47
YSF3YNL138W-A NTE1Q04958 1679 aa5.87□□□□□ -1.47
YSF3YNL138W-A VMA3P25515 160 aa5.86□□□□□ -1.47
YSF3YNL138W-A ACO2P39533 789 aa5.86□□□□□ -1.47
YSF3YNL138W-A YIR007WP40566 764 aa5.86□□□□□ -1.47
YSF3YNL138W-A ROG3P43602 733 aa5.86□□□□□ -1.47
YSF3YNL138W-A ALD2P47771 506 aa5.86□□□□□ -1.47
YSF3YNL138W-A UTP4Q06679 776 aaKnown RBP5.86□□□□□ -1.47
YSF3YNL138W-A DOP1Q03921 1698 aa5.85□□□□□ -1.47
YSF3YNL138W-A MMS22Q06164 1454 aa5.85□□□□□ -1.47
YSF3YNL138W-A LEU1P07264 779 aaKnown RBP5.85□□□□□ -1.47
YSF3YNL138W-A ERP5P38819 212 aa5.85□□□□□ -1.47
YSF3YNL138W-A QDR2P40474 542 aa5.85□□□□□ -1.47
YSF3YNL138W-A MTO1P53070 669 aa5.85□□□□□ -1.47
YSF3YNL138W-A TY1A-MR1Q04215 440 aa5.85□□□□□ -1.47
YSF3YNL138W-A LSO1Q3E827 93 aa5.85□□□□□ -1.47
YSF3YNL138W-A YBL113CQ7M4S9 792 aa5.85□□□□□ -1.47
YSF3YNL138W-A TY1B-JR2P47100 1755 aaKnown RBP5.85□□□□□ -1.47
YSF3YNL138W-A TY1B-ER2Q03619 1755 aa5.85□□□□□ -1.47
YSF3YNL138W-A TY1B-MR1Q04214 1755 aa5.85□□□□□ -1.47
YSF3YNL138W-A TY1B-MR2Q04670 1755 aaKnown RBP5.85□□□□□ -1.47
YSF3YNL138W-A TY1B-LR1Q12088 1755 aaKnown RBP5.85□□□□□ -1.47
YSF3YNL138W-A TY1B-NL1Q12112 1755 aa5.85□□□□□ -1.47
YSF3YNL138W-A TY1B-GR1Q12141 1755 aa5.85□□□□□ -1.47
YSF3YNL138W-A TY1B-BLQ12490 1755 aa5.85□□□□□ -1.47
YSF3YNL138W-A GLO3P38682 493 aaKnown RBP5.84□□□□□ -1.47
YSF3YNL138W-A SSF1P38789 453 aaPredicted RBP5.84□□□□□ -1.47
YSF3YNL138W-A YDL176WQ12027 708 aa5.84□□□□□ -1.47
YSF3YNL138W-A CCP1P00431 361 aa5.83□□□□□ -1.48
YSF3YNL138W-A TRL1P09880 827 aaKnown RBP5.83□□□□□ -1.48
YSF3YNL138W-A RPB10P22139 70 aa5.83□□□□□ -1.48
YSF3YNL138W-A KAP122P32767 1081 aa5.83□□□□□ -1.48
YSF3YNL138W-A YML020WQ03722 664 aa5.83□□□□□ -1.48
YSF3YNL138W-A MRPL16P38064 232 aa5.82□□□□□ -1.48
YSF3YNL138W-A GRS1P38088 690 aaKnown RBP5.82□□□□□ -1.48
YSF3YNL138W-A QDR1P40475 563 aa5.82□□□□□ -1.48
YSF3YNL138W-A SUT1P53032 299 aaKnown RBP5.82□□□□□ -1.48
YSF3YNL138W-A ATG1P53104 897 aa5.82□□□□□ -1.48
YSF3YNL138W-A RPO21P04050 1733 aaKnown RBP5.82□□□□□ -1.48
YSF3YNL138W-A NUP170P38181 1502 aa5.81□□□□□ -1.48
YSF3YNL138W-A RGP1P16664 663 aa5.81□□□□□ -1.48
YSF3YNL138W-A CUZ1P53899 274 aa5.81□□□□□ -1.48
YSF3YNL138W-A YPL062WQ02781 134 aa5.81□□□□□ -1.48
YSF3YNL138W-A APC11Q12157 165 aa5.81□□□□□ -1.48
YSF3YNL138W-A STB3Q12427 513 aa5.81□□□□□ -1.48
YSF3YNL138W-A SPO14P36126 1683 aa5.81□□□□□ -1.48
YSF3YNL138W-A NAB2P32505 525 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms