RNA–Protein interactions for RNA: YNL119W

NCS2, Transcript of Protein required for uridine thiolation of Lys(UUU) and Glu(UUC) tRNAs, yeast

Gene NCS2, Length 1,482 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCS2	YNL119W	AI1	P03875	834 aa		4.91	□□□□□ -1.62
NCS2	YNL119W	LEU1	P07264	779 aa	Known RBP	4.91	□□□□□ -1.62
NCS2	YNL119W	SBP1	P10080	294 aa	Known RBP	4.91	□□□□□ -1.62
NCS2	YNL119W	LDH1	P38139	375 aa		4.91	□□□□□ -1.62
NCS2	YNL119W	YBR287W	P38355	427 aa		4.91	□□□□□ -1.62
NCS2	YNL119W	BOL3	P39724	118 aa		4.91	□□□□□ -1.62
NCS2	YNL119W	ATG1	P53104	897 aa		4.91	□□□□□ -1.62
NCS2	YNL119W	KAP122	P32767	1081 aa		4.9	□□□□□ -1.62
NCS2	YNL119W	SLD2	P34252	453 aa		4.9	□□□□□ -1.62
NCS2	YNL119W	GLO3	P38682	493 aa	Known RBP	4.9	□□□□□ -1.62
NCS2	YNL119W	SPR3	P41901	512 aa		4.9	□□□□□ -1.62
NCS2	YNL119W	CUZ1	P53899	274 aa		4.9	□□□□□ -1.62
NCS2	YNL119W	RGP1	P16664	663 aa		4.89	□□□□□ -1.63
NCS2	YNL119W	DIT1	P21623	536 aa		4.89	□□□□□ -1.63
NCS2	YNL119W	VMA3	P25515	160 aa		4.89	□□□□□ -1.63
NCS2	YNL119W	SSF1	P38789	453 aa	Predicted RBP	4.89	□□□□□ -1.63
NCS2	YNL119W	QDR2	P40474	542 aa		4.89	□□□□□ -1.63
NCS2	YNL119W	YPR053C	Q6Q5F3	151 aa		4.89	□□□□□ -1.63
NCS2	YNL119W	YBL113C	Q7M4S9	792 aa		4.89	□□□□□ -1.63
NCS2	YNL119W	MRPL16	P38064	232 aa		4.88	□□□□□ -1.63
NCS2	YNL119W	STM1	P39015	273 aa	Known RBP	4.88	□□□□□ -1.63
NCS2	YNL119W	FIR1	P40020	876 aa		4.88	□□□□□ -1.63
NCS2	YNL119W	ACF4	P47129	309 aa		4.88	□□□□□ -1.63
NCS2	YNL119W	ALD2	P47771	506 aa		4.88	□□□□□ -1.63
NCS2	YNL119W	YMR265C	Q03508	461 aa	Known RBP	4.88	□□□□□ -1.63
NCS2	YNL119W	STB3	Q12427	513 aa		4.88	□□□□□ -1.63
NCS2	YNL119W	QDR1	P40475	563 aa		4.88	□□□□□ -1.63
NCS2	YNL119W	APC11	Q12157	165 aa		4.88	□□□□□ -1.63
NCS2	YNL119W	GRS1	P38088	690 aa	Known RBP	4.87	□□□□□ -1.63
NCS2	YNL119W	NCL1	P38205	684 aa	Known RBP	4.87	□□□□□ -1.63
NCS2	YNL119W	ERP5	P38819	212 aa		4.87	□□□□□ -1.63
NCS2	YNL119W	CEM1	P39525	442 aa		4.87	□□□□□ -1.63
NCS2	YNL119W	HXT8	P40886	569 aa		4.87	□□□□□ -1.63
NCS2	YNL119W	SUT1	P53032	299 aa	Known RBP	4.87	□□□□□ -1.63
NCS2	YNL119W	KRE33	P53914	1056 aa	Known RBP	4.87	□□□□□ -1.63
NCS2	YNL119W	UFD2	P54860	961 aa		4.87	□□□□□ -1.63
NCS2	YNL119W	YML020W	Q03722	664 aa		4.87	□□□□□ -1.63
NCS2	YNL119W	RPC31	P17890	251 aa		4.86	□□□□□ -1.63
NCS2	YNL119W	FPS1	P23900	669 aa		4.86	□□□□□ -1.63
NCS2	YNL119W	SMC1	P32908	1225 aa		4.86	□□□□□ -1.63
NCS2	YNL119W	ISW1	P38144	1129 aa		4.86	□□□□□ -1.63
NCS2	YNL119W	GIP1	P38229	639 aa		4.86	□□□□□ -1.63
NCS2	YNL119W	SKP1	P52286	194 aa		4.86	□□□□□ -1.63
NCS2	YNL119W	YOR296W	Q08748	1289 aa		4.86	□□□□□ -1.63
NCS2	YNL119W	TRL1	P09880	827 aa	Known RBP	4.85	□□□□□ -1.63
NCS2	YNL119W	BOI1	P38041	980 aa	Known RBP	4.85	□□□□□ -1.63
NCS2	YNL119W	SKN7	P38889	622 aa		4.85	□□□□□ -1.63
NCS2	YNL119W	CUS1	Q02554	436 aa	Predicted RBP	4.85	□□□□□ -1.63
NCS2	YNL119W	YDR461C-A	Q2V2P7	80 aa		4.85	□□□□□ -1.63
NCS2	YNL119W	SEC20	P28791	383 aa		4.84	□□□□□ -1.63
NCS2	YNL119W	APM2	P38700	605 aa		4.84	□□□□□ -1.63
NCS2	YNL119W	ADE12	P80210	433 aa	Known RBP	4.84	□□□□□ -1.63
NCS2	YNL119W	HEH2	Q03281	663 aa		4.84	□□□□□ -1.63
NCS2	YNL119W	SYT1	Q06836	1226 aa		4.84	□□□□□ -1.63
NCS2	YNL119W	RPB10	P22139	70 aa		4.83	□□□□□ -1.64
NCS2	YNL119W	MSN1	P22148	382 aa		4.83	□□□□□ -1.64
NCS2	YNL119W	MDJ2	P42834	146 aa		4.83	□□□□□ -1.64
NCS2	YNL119W	RAD55	P38953	406 aa		4.82	□□□□□ -1.64
NCS2	YNL119W	TRS120	Q04183	1289 aa		4.82	□□□□□ -1.64
NCS2	YNL119W	YHL050C	P38721	697 aa		4.81	□□□□□ -1.64
NCS2	YNL119W	YHR219W	P38900	624 aa		4.81	□□□□□ -1.64
NCS2	YNL119W	NTA1	P40354	457 aa		4.81	□□□□□ -1.64
NCS2	YNL119W	SBE2	P42223	864 aa	Known RBP	4.81	□□□□□ -1.64
NCS2	YNL119W	NOP8	Q08287	484 aa	Predicted RBP	4.81	□□□□□ -1.64
NCS2	YNL119W	BSD2	P38356	321 aa		4.81	□□□□□ -1.64
NCS2	YNL119W	IRS4	P36115	615 aa	Known RBP	4.8	□□□□□ -1.64
NCS2	YNL119W	MSC7	P38694	644 aa		4.8	□□□□□ -1.64
NCS2	YNL119W	AIM46	P38885	310 aa		4.8	□□□□□ -1.64
NCS2	YNL119W	TDA6	Q06466	467 aa		4.8	□□□□□ -1.64
NCS2	YNL119W	RSC2	Q06488	889 aa		4.8	□□□□□ -1.64
NCS2	YNL119W	MSC6	Q08818	692 aa	Known RBP	4.8	□□□□□ -1.64
NCS2	YNL119W	PPX1	P38698	397 aa		4.79	□□□□□ -1.64
NCS2	YNL119W	NUT2	Q06213	157 aa		4.79	□□□□□ -1.64
NCS2	YNL119W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	RIP-Chip
NCS2	YNL119W	KTR2	P33550	425 aa		4.78	□□□□□ -1.64
NCS2	YNL119W	YER156C	P40093	338 aa	Known RBP	4.78	□□□□□ -1.64
NCS2	YNL119W	PSY2	P40164	858 aa		4.78	□□□□□ -1.64
NCS2	YNL119W	YIL165C	P40446	119 aa		4.78	□□□□□ -1.64
NCS2	YNL119W	RGD2	P43556	714 aa		4.78	□□□□□ -1.64
NCS2	YNL119W	ITC1	P53125	1264 aa		4.78	□□□□□ -1.64
NCS2	YNL119W	YNL011C	P53980	444 aa		4.78	□□□□□ -1.64
NCS2	YNL119W	YMR187C	Q03236	431 aa		4.78	□□□□□ -1.64
NCS2	YNL119W	THI12	P42883	340 aa		4.77	□□□□□ -1.65
NCS2	YNL119W	THI5	P43534	340 aa		4.77	□□□□□ -1.65
NCS2	YNL119W	THI11	P47183	340 aa		4.77	□□□□□ -1.65
NCS2	YNL119W	YNR040W	P53736	256 aa		4.77	□□□□□ -1.65
NCS2	YNL119W	CDC55	Q00362	526 aa		4.77	□□□□□ -1.65
NCS2	YNL119W	SEN54	Q02825	467 aa	Predicted RBP	4.77	□□□□□ -1.65
NCS2	YNL119W	TY1A-DR2	Q03964	440 aa	Known RBP	4.77	□□□□□ -1.65
NCS2	YNL119W	THI13	Q07748	340 aa		4.77	□□□□□ -1.65
NCS2	YNL119W	TIF6	Q12522	245 aa	Known RBP	4.77	□□□□□ -1.65
NCS2	YNL119W	HEM3	P28789	327 aa		4.76	□□□□□ -1.65
NCS2	YNL119W	RSC4	Q02206	625 aa		4.76	□□□□□ -1.65
NCS2	YNL119W	EMG1	Q06287	252 aa	Known RBP	4.76	□□□□□ -1.65
NCS2	YNL119W	FRT1	Q99332	602 aa		4.76	□□□□□ -1.65
NCS2	YNL119W	KNS1	P32350	737 aa	Predicted RBP	4.75	□□□□□ -1.65
NCS2	YNL119W	ECM2	P38241	364 aa	Known RBP	4.75	□□□□□ -1.65
NCS2	YNL119W	IPL1	P38991	367 aa		4.75	□□□□□ -1.65
NCS2	YNL119W	SAM37	P50110	327 aa		4.75	□□□□□ -1.65
NCS2	YNL119W	BSC2	Q05611	235 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms