RNA–Protein interactions for RNA: YNL075W

IMP4, Transcript of Component of the SSU processome, yeast

Gene IMP4, Length 873 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IMP4	YNL075W	CEM1	P39525	442 aa		5.16	□□□□□ -1.58
IMP4	YNL075W	RPP2B	P02400	110 aa	Known RBP	5.15	□□□□□ -1.59
IMP4	YNL075W	DLD3	P39976	496 aa	Known RBP	5.15	□□□□□ -1.59
IMP4	YNL075W	IPL1	P38991	367 aa		5.14	□□□□□ -1.59
IMP4	YNL075W	NAF1	P53919	492 aa	Known RBP	5.14	□□□□□ -1.59
IMP4	YNL075W	CCT8	P47079	568 aa	Known RBP	5.13	□□□□□ -1.59
IMP4	YNL075W	STE20	Q03497	939 aa	Known RBP	5.13	□□□□□ -1.59
IMP4	YNL075W	FRA1	Q07825	749 aa		5.13	□□□□□ -1.59
IMP4	YNL075W	BUD21	Q08492	214 aa	Predicted RBP	5.13	□□□□□ -1.59
IMP4	YNL075W	SSA2	P10592	639 aa	Known RBP	5.12	□□□□□ -1.59
IMP4	YNL075W	UBP15	P50101	1230 aa		5.12	□□□□□ -1.59
IMP4	YNL075W	IML1	P47170	1584 aa		5.12	□□□□□ -1.59
IMP4	YNL075W	NUP188	P52593	1655 aa	Known RBP	5.12	□□□□□ -1.59
IMP4	YNL075W	DIT1	P21623	536 aa		5.11	□□□□□ -1.59
IMP4	YNL075W	MSN5	P52918	1224 aa		5.11	□□□□□ -1.59
IMP4	YNL075W	ADE12	P80210	433 aa	Known RBP	5.11	□□□□□ -1.59
IMP4	YNL075W	YMR265C	Q03508	461 aa	Known RBP	5.11	□□□□□ -1.59
IMP4	YNL075W	SYT1	Q06836	1226 aa		5.11	□□□□□ -1.59
IMP4	YNL075W	TY1B-NL2	Q99337	1749 aa	Known RBP	5.11	□□□□□ -1.59
IMP4	YNL075W	USO1	P25386	1790 aa		5.1	□□□□□ -1.59
IMP4	YNL075W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
IMP4	YNL075W	YPR053C	Q6Q5F3	151 aa		5.1	□□□□□ -1.59
IMP4	YNL075W	VMR1	P38735	1592 aa		5.09	□□□□□ -1.59
IMP4	YNL075W	TYS1	P36421	394 aa	Known RBP	5.09	□□□□□ -1.59
IMP4	YNL075W	SSN3	P39073	555 aa		5.09	□□□□□ -1.59
IMP4	YNL075W	YDR461C-A	Q2V2P7	80 aa		5.09	□□□□□ -1.59
IMP4	YNL075W	SLA1	P32790	1244 aa		5.08	□□□□□ -1.6
IMP4	YNL075W	KRE33	P53914	1056 aa	Known RBP	5.08	□□□□□ -1.6
IMP4	YNL075W	WTM2	Q12206	467 aa		5.08	□□□□□ -1.6
IMP4	YNL075W	SPT2	P06843	333 aa	Predicted RBP	5.07	□□□□□ -1.6
IMP4	YNL075W	THI12	P42883	340 aa		5.07	□□□□□ -1.6
IMP4	YNL075W	THI5	P43534	340 aa		5.07	□□□□□ -1.6
IMP4	YNL075W	THI11	P47183	340 aa		5.07	□□□□□ -1.6
IMP4	YNL075W	THI13	Q07748	340 aa		5.07	□□□□□ -1.6
IMP4	YNL075W	SKN7	P38889	622 aa		5.06	□□□□□ -1.6
IMP4	YNL075W	MRX12	P47084	519 aa		5.06	□□□□□ -1.6
IMP4	YNL075W	IKI3	Q06706	1349 aa	Known RBP	5.05	□□□□□ -1.6
IMP4	YNL075W	CSE4	P36012	229 aa		5.05	□□□□□ -1.6
IMP4	YNL075W	SBE2	P42223	864 aa	Known RBP	5.05	□□□□□ -1.6
IMP4	YNL075W	APL6	P46682	809 aa		5.05	□□□□□ -1.6
IMP4	YNL075W	ISR1	Q06098	443 aa	Known RBP	5.05	□□□□□ -1.6
IMP4	YNL075W	TDA6	Q06466	467 aa		5.05	□□□□□ -1.6
IMP4	YNL075W	TY1A-DR3	Q12441	440 aa		5.05	□□□□□ -1.6
IMP4	YNL075W	PDR5	P33302	1511 aa	Known RBP	5.04	□□□□□ -1.6
IMP4	YNL075W	DAT1	P13483	248 aa	Known RBP	5.04	□□□□□ -1.6
IMP4	YNL075W	UTR2	P32623	467 aa		5.04	□□□□□ -1.6
IMP4	YNL075W	AHP1	P38013	176 aa	Known RBP	5.04	□□□□□ -1.6
IMP4	YNL075W	KIN1	P13185	1064 aa		5.03	□□□□□ -1.6
IMP4	YNL075W	EMP47	P43555	445 aa		5.03	□□□□□ -1.6
IMP4	YNL075W	YMR187C	Q03236	431 aa		5.03	□□□□□ -1.6
IMP4	YNL075W	SBP1	P10080	294 aa	Known RBP	5.02	□□□□□ -1.61
IMP4	YNL075W	TBS1	P38114	1094 aa		5.02	□□□□□ -1.61
IMP4	YNL075W	SPT5	P27692	1063 aa	Known RBP	5.01	□□□□□ -1.61
IMP4	YNL075W	MCX1	P38323	520 aa	Predicted RBP	5.01	□□□□□ -1.61
IMP4	YNL075W	MCM16	Q12262	181 aa		5.01	□□□□□ -1.61
IMP4	YNL075W	ISF1	P32488	338 aa		5	□□□□□ -1.61
IMP4	YNL075W	UTP7	P40055	554 aa	Known RBP	5	□□□□□ -1.61
IMP4	YNL075W	YNR014W	P53719	212 aa		5	□□□□□ -1.61
IMP4	YNL075W	GPM1	P00950	247 aa	Known RBP	4.99	□□□□□ -1.61
IMP4	YNL075W	HAL5	P38970	855 aa	Known RBP	4.99	□□□□□ -1.61
IMP4	YNL075W	ALA1	P40825	983 aa	Known RBP	4.99	□□□□□ -1.61
IMP4	YNL075W	SUM1	P46676	1062 aa		4.99	□□□□□ -1.61
IMP4	YNL075W	CFT1	Q06632	1357 aa	Known RBP	4.99	□□□□□ -1.61
IMP4	YNL075W	SSM4	P40318	1319 aa		4.98	□□□□□ -1.61
IMP4	YNL075W	PDR11	P40550	1411 aa		4.98	□□□□□ -1.61
IMP4	YNL075W	JJJ2	P46997	583 aa		4.98	□□□□□ -1.61
IMP4	YNL075W	GCN2	P15442	1659 aa		4.98	□□□□□ -1.61
IMP4	YNL075W	FPS1	P23900	669 aa		4.97	□□□□□ -1.61
IMP4	YNL075W	IRE1	P32361	1115 aa		4.97	□□□□□ -1.61
IMP4	YNL075W	SLX8	P40072	274 aa		4.97	□□□□□ -1.61
IMP4	YNL075W	KRE5	P22023	1365 aa		4.96	□□□□□ -1.62
IMP4	YNL075W	YCK2	P23292	546 aa	Known RBP	4.96	□□□□□ -1.62
IMP4	YNL075W	GUA1	P38625	525 aa	Known RBP	4.96	□□□□□ -1.62
IMP4	YNL075W	BOI2	P39969	1040 aa		4.96	□□□□□ -1.62
IMP4	YNL075W	UTP13	Q05946	817 aa	Known RBP	4.96	□□□□□ -1.62
IMP4	YNL075W	YDJ1	P25491	409 aa	Known RBP	4.95	□□□□□ -1.62
IMP4	YNL075W	SHM1	P37292	490 aa	Predicted RBP	4.95	□□□□□ -1.62
IMP4	YNL075W	YBL036C	P38197	257 aa		4.95	□□□□□ -1.62
IMP4	YNL075W	ATG3	P40344	310 aa		4.95	□□□□□ -1.62
IMP4	YNL075W	RIA1	P53893	1110 aa		4.95	□□□□□ -1.62
IMP4	YNL075W	BCK1	Q01389	1478 aa		4.94	□□□□□ -1.62
IMP4	YNL075W	RAV1	P47104	1357 aa		4.94	□□□□□ -1.62
IMP4	YNL075W	MET1	P36150	593 aa		4.94	□□□□□ -1.62
IMP4	YNL075W	MRPL16	P38064	232 aa		4.94	□□□□□ -1.62
IMP4	YNL075W	YNR029C	P53729	429 aa	Known RBP	4.94	□□□□□ -1.62
IMP4	YNL075W	HDA3	Q06623	655 aa		4.94	□□□□□ -1.62
IMP4	YNL075W	PSH1	Q12161	406 aa		4.94	□□□□□ -1.62
IMP4	YNL075W	YDR215C	Q12240	137 aa		4.94	□□□□□ -1.62
IMP4	YNL075W	PDC6	P26263	563 aa	Known RBP	4.93	□□□□□ -1.62
IMP4	YNL075W	SOH1	P38633	127 aa		4.93	□□□□□ -1.62
IMP4	YNL075W	PDC5	P16467	563 aa	Known RBP	4.92	□□□□□ -1.62
IMP4	YNL075W	KNS1	P32350	737 aa	Predicted RBP	4.92	□□□□□ -1.62
IMP4	YNL075W	PAF1	P38351	445 aa		4.92	□□□□□ -1.62
IMP4	YNL075W	YPP1	P46951	817 aa		4.92	□□□□□ -1.62
IMP4	YNL075W	HPC2	Q01448	625 aa		4.92	□□□□□ -1.62
IMP4	YNL075W	AMN1	P38285	549 aa	Predicted RBP	4.91	□□□□□ -1.62
IMP4	YNL075W	SLN1	P39928	1220 aa	Predicted RBP	4.91	□□□□□ -1.62
IMP4	YNL075W	STB3	Q12427	513 aa		4.91	□□□□□ -1.62
IMP4	YNL075W	RTC1	Q08281	1341 aa		4.91	□□□□□ -1.62
IMP4	YNL075W	RPS31	P05759	152 aa	Known RBP	4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms