RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W APM2P38700 605 aa6.98□□□□□ -1.29
UBP8YMR223W CUS1Q02554 436 aaPredicted RBP6.98□□□□□ -1.29
UBP8YMR223W SBP1P10080 294 aaKnown RBP6.97□□□□□ -1.29
UBP8YMR223W PRK1P40494 810 aa6.97□□□□□ -1.29
UBP8YMR223W DMA2P53924 522 aa6.97□□□□□ -1.29
UBP8YMR223W NHA1Q99271 985 aa6.97□□□□□ -1.29
UBP8YMR223W TAT1P38085 619 aa6.95□□□□□ -1.3
UBP8YMR223W TPS3P38426 1054 aaKnown RBP6.95□□□□□ -1.3
UBP8YMR223W SLN1P39928 1220 aaPredicted RBP6.95□□□□□ -1.3
UBP8YMR223W ECM23Q02710 187 aa6.94□□□□□ -1.3
UBP8YMR223W ALG14P38242 237 aa6.93□□□□□ -1.3
UBP8YMR223W AMN1P38285 549 aaPredicted RBP6.93□□□□□ -1.3
UBP8YMR223W PGM2P37012 569 aaKnown RBP6.93□□□□□ -1.3
UBP8YMR223W QDR2P40474 542 aa6.93□□□□□ -1.3
UBP8YMR223W LSB6P42951 607 aa6.92□□□□□ -1.3
UBP8YMR223W NRD1P53617 575 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
UBP8YMR223W YNR040WP53736 256 aa6.92□□□□□ -1.3
UBP8YMR223W GIS4Q04233 774 aa6.92□□□□□ -1.3
UBP8YMR223W CAB1Q04430 367 aa6.92□□□□□ -1.3
UBP8YMR223W SUV3P32580 737 aa6.91□□□□□ -1.3
UBP8YMR223W MRPL33P20084 86 aa6.9□□□□□ -1.31
UBP8YMR223W NAR1P23503 491 aaKnown RBP6.9□□□□□ -1.31
UBP8YMR223W UBX7P38349 436 aa6.9□□□□□ -1.31
UBP8YMR223W DYS1P38791 387 aa6.9□□□□□ -1.31
UBP8YMR223W YER156CP40093 338 aaKnown RBP6.9□□□□□ -1.31
UBP8YMR223W PUF6Q04373 656 aaKnown RBP6.9□□□□□ -1.31
UBP8YMR223W PRY1P47032 299 aa6.89□□□□□ -1.31
UBP8YMR223W BUD9P53226 547 aa6.89□□□□□ -1.31
UBP8YMR223W MCA1Q08601 432 aa6.89□□□□□ -1.31
UBP8YMR223W YOR296WQ08748 1289 aa6.89□□□□□ -1.31
UBP8YMR223W VMA3P25515 160 aa6.88□□□□□ -1.31
UBP8YMR223W YPL034WQ03083 165 aa6.88□□□□□ -1.31
UBP8YMR223W SLP1Q12232 587 aa6.88□□□□□ -1.31
UBP8YMR223W YBR197CP38306 217 aa6.87□□□□□ -1.31
UBP8YMR223W IDI1P15496 288 aa6.86□□□□□ -1.31
UBP8YMR223W PUP1P25043 261 aa6.86□□□□□ -1.31
UBP8YMR223W CPS1P27614 576 aa6.86□□□□□ -1.31
UBP8YMR223W NAB2P32505 525 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
UBP8YMR223W ITC1P53125 1264 aa6.86□□□□□ -1.31
UBP8YMR223W LDH1P38139 375 aa6.85□□□□□ -1.31
UBP8YMR223W AI3P03877 415 aa6.84□□□□□ -1.31
UBP8YMR223W GIP1P38229 639 aa6.84□□□□□ -1.31
UBP8YMR223W ALD4P46367 519 aaKnown RBP6.84□□□□□ -1.31
UBP8YMR223W SFA1P32771 386 aa6.84□□□□□ -1.32
UBP8YMR223W FOX2Q02207 900 aaKnown RBP6.84□□□□□ -1.32
UBP8YMR223W RSC2Q06488 889 aa6.84□□□□□ -1.32
UBP8YMR223W ISW1P38144 1129 aa6.83□□□□□ -1.32
UBP8YMR223W YBR287WP38355 427 aa6.83□□□□□ -1.32
UBP8YMR223W SRS2P12954 1174 aa6.82□□□□□ -1.32
UBP8YMR223W SAC7P17121 654 aa6.82□□□□□ -1.32
UBP8YMR223W SSA4P22202 642 aaKnown RBP6.82□□□□□ -1.32
UBP8YMR223W PUN1Q06991 263 aa6.82□□□□□ -1.32
UBP8YMR223W RRM3P38766 723 aa6.81□□□□□ -1.32
UBP8YMR223W ISC10P32645 267 aa6.8□□□□□ -1.32
UBP8YMR223W ARI1P53111 347 aaKnown RBP6.8□□□□□ -1.32
UBP8YMR223W MRP10O75012 95 aa6.79□□□□□ -1.32
UBP8YMR223W PGM1P33401 570 aaKnown RBP6.78□□□□□ -1.32
UBP8YMR223W BSD2P38356 321 aa6.78□□□□□ -1.32
UBP8YMR223W CWC15Q03772 175 aaKnown RBP6.78□□□□□ -1.32
UBP8YMR223W YIL165CP40446 119 aa6.77□□□□□ -1.33
UBP8YMR223W GLT1Q12680 2145 aaKnown RBP6.77□□□□□ -1.33
UBP8YMR223W TY4B-PA0A0B7P3V8 1104 aa6.76□□□□□ -1.33
UBP8YMR223W MSN1P22148 382 aa6.76□□□□□ -1.33
UBP8YMR223W TY4A-HQ6Q5P6 413 aa6.76□□□□□ -1.33
UBP8YMR223W GIP2P40036 548 aa6.76□□□□□ -1.33
UBP8YMR223W FIR1P40020 876 aa6.75□□□□□ -1.33
UBP8YMR223W RSC6P25632 483 aa6.74□□□□□ -1.33
UBP8YMR223W RRN6P32786 894 aa6.74□□□□□ -1.33
UBP8YMR223W MAC1P35192 417 aa6.74□□□□□ -1.33
UBP8YMR223W LEM3P42838 414 aa6.74□□□□□ -1.33
UBP8YMR223W PPT1P53043 513 aa6.74□□□□□ -1.33
UBP8YMR223W DSE4P53753 1117 aa6.74□□□□□ -1.33
UBP8YMR223W GAS5Q08193 484 aa6.74□□□□□ -1.33
UBP8YMR223W HXT8P40886 569 aa6.73□□□□□ -1.33
UBP8YMR223W NOB1Q08444 459 aaKnown RBP6.73□□□□□ -1.33
UBP8YMR223W GUP1P53154 560 aa6.72□□□□□ -1.33
UBP8YMR223W SOK2P53438 785 aaPredicted RBP6.72□□□□□ -1.33
UBP8YMR223W APC11Q12157 165 aa6.72□□□□□ -1.33
UBP8YMR223W TED1P40533 473 aa6.71□□□□□ -1.34
UBP8YMR223W INP51P40559 946 aaKnown RBP6.71□□□□□ -1.34
UBP8YMR223W PNP1Q05788 311 aa6.71□□□□□ -1.34
UBP8YMR223W EMG1Q06287 252 aaKnown RBP6.71□□□□□ -1.34
UBP8YMR223W COQ2P32378 372 aa6.7□□□□□ -1.34
UBP8YMR223W INP52P50942 1183 aa6.7□□□□□ -1.34
UBP8YMR223W ALO1P54783 526 aaKnown RBP6.7□□□□□ -1.34
UBP8YMR223W YML083CQ04526 418 aa6.7□□□□□ -1.34
UBP8YMR223W TY1A-NL1Q12391 440 aaKnown RBP6.7□□□□□ -1.34
UBP8YMR223W OMA1P36163 345 aa6.69□□□□□ -1.34
UBP8YMR223W AIM46P38885 310 aa6.69□□□□□ -1.34
UBP8YMR223W BIO5P53744 561 aaKnown RBP6.69□□□□□ -1.34
UBP8YMR223W SOG2Q08817 791 aa6.69□□□□□ -1.34
UBP8YMR223W NTA1P40354 457 aa6.68□□□□□ -1.34
UBP8YMR223W YJL181WP46987 611 aa6.68□□□□□ -1.34
UBP8YMR223W LSO1Q3E827 93 aa6.68□□□□□ -1.34
UBP8YMR223W KAE1P36132 386 aa6.67□□□□□ -1.34
UBP8YMR223W RGD2P43556 714 aa6.67□□□□□ -1.34
UBP8YMR223W FUS1P11710 512 aa6.66□□□□□ -1.34
UBP8YMR223W SMC1P32908 1225 aa6.66□□□□□ -1.34
UBP8YMR223W SAF1P38352 637 aa6.66□□□□□ -1.34
UBP8YMR223W MED7Q08278 222 aa6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms