RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W SKP1P52286 194 aa7.02□□□□□ -1.29
ROT1YMR200W CUS1Q02554 436 aaPredicted RBP7.02□□□□□ -1.29
ROT1YMR200W RPC31P17890 251 aa7.01□□□□□ -1.29
ROT1YMR200W SSA4P22202 642 aaKnown RBP7.01□□□□□ -1.29
ROT1YMR200W KNS1P32350 737 aaPredicted RBP7.01□□□□□ -1.29
ROT1YMR200W CWH41P53008 833 aa7.01□□□□□ -1.29
ROT1YMR200W TDA6Q06466 467 aa7.01□□□□□ -1.29
ROT1YMR200W YBR197CP38306 217 aa7□□□□□ -1.29
ROT1YMR200W ALD4P46367 519 aaKnown RBP7□□□□□ -1.29
ROT1YMR200W MRPL33P20084 86 aa6.99□□□□□ -1.29
ROT1YMR200W YNR040WP53736 256 aa6.99□□□□□ -1.29
ROT1YMR200W RPP1AP05318 106 aaPredicted RBP6.98□□□□□ -1.29
ROT1YMR200W NAB2P32505 525 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29 RIP-Chip
ROT1YMR200W YNR014WP53719 212 aa6.98□□□□□ -1.29
ROT1YMR200W VMA3P25515 160 aa6.97□□□□□ -1.29
ROT1YMR200W PRK1P40494 810 aa6.97□□□□□ -1.29
ROT1YMR200W PUF6Q04373 656 aaKnown RBP6.97□□□□□ -1.29
ROT1YMR200W PUN1Q06991 263 aa6.97□□□□□ -1.29
ROT1YMR200W ISC10P32645 267 aa6.96□□□□□ -1.3
ROT1YMR200W NCL1P38205 684 aaKnown RBP6.96□□□□□ -1.3
ROT1YMR200W TPS3P38426 1054 aaKnown RBP6.96□□□□□ -1.3
ROT1YMR200W LSB3P43603 459 aaKnown RBP6.96□□□□□ -1.3
ROT1YMR200W HEH2Q03281 663 aa6.96□□□□□ -1.3
ROT1YMR200W YPR053CQ6Q5F3 151 aa6.96□□□□□ -1.3
ROT1YMR200W APM2P38700 605 aa6.95□□□□□ -1.3
ROT1YMR200W BOI2P39969 1040 aa6.95□□□□□ -1.3
ROT1YMR200W CWC15Q03772 175 aaKnown RBP6.95□□□□□ -1.3
ROT1YMR200W MCX1P38323 520 aaPredicted RBP6.94□□□□□ -1.3
ROT1YMR200W NOP7P53261 605 aaKnown RBP6.94□□□□□ -1.3
ROT1YMR200W SUB2Q07478 446 aaKnown RBP6.94□□□□□ -1.3
ROT1YMR200W SSA1P10591 642 aaKnown RBP6.93□□□□□ -1.3
ROT1YMR200W SRS2P12954 1174 aa6.93□□□□□ -1.3
ROT1YMR200W GEF1P37020 779 aa6.93□□□□□ -1.3
ROT1YMR200W BSD2P38356 321 aa6.93□□□□□ -1.3
ROT1YMR200W ITC1P53125 1264 aa6.93□□□□□ -1.3
ROT1YMR200W SKN7P38889 622 aa6.92□□□□□ -1.3
ROT1YMR200W CCT8P47079 568 aaKnown RBP6.92□□□□□ -1.3
ROT1YMR200W YMR187CQ03236 431 aa6.92□□□□□ -1.3
ROT1YMR200W MRP10O75012 95 aa6.91□□□□□ -1.3
ROT1YMR200W YCK2P23292 546 aaKnown RBP6.91□□□□□ -1.3
ROT1YMR200W YOR296WQ08748 1289 aa6.91□□□□□ -1.3
ROT1YMR200W IDI1P15496 288 aa6.9□□□□□ -1.3
ROT1YMR200W MET1P36150 593 aa6.9□□□□□ -1.3
ROT1YMR200W DYS1P38791 387 aa6.9□□□□□ -1.3
ROT1YMR200W YDR215CQ12240 137 aa6.9□□□□□ -1.3
ROT1YMR200W PGM2P37012 569 aaKnown RBP6.89□□□□□ -1.31
ROT1YMR200W LDH1P38139 375 aa6.89□□□□□ -1.31
ROT1YMR200W SLN1P39928 1220 aaPredicted RBP6.89□□□□□ -1.31
ROT1YMR200W PNP1Q05788 311 aa6.89□□□□□ -1.31
ROT1YMR200W NAR1P23503 491 aaKnown RBP6.88□□□□□ -1.31
ROT1YMR200W KTR2P33550 425 aa6.88□□□□□ -1.31
ROT1YMR200W BOI1P38041 980 aaKnown RBP6.88□□□□□ -1.31
ROT1YMR200W GIP1P38229 639 aa6.87□□□□□ -1.31
ROT1YMR200W ALG14P38242 237 aa6.87□□□□□ -1.31
ROT1YMR200W YER156CP40093 338 aaKnown RBP6.87□□□□□ -1.31
ROT1YMR200W MSN1P22148 382 aa6.86□□□□□ -1.31
ROT1YMR200W GIS4Q04233 774 aa6.86□□□□□ -1.31
ROT1YMR200W NHA1Q99271 985 aa6.85□□□□□ -1.31
ROT1YMR200W RPB10P22139 70 aa6.84□□□□□ -1.31
ROT1YMR200W PRY1P47032 299 aa6.84□□□□□ -1.31
ROT1YMR200W URN1Q06525 465 aaKnown RBP6.84□□□□□ -1.31
ROT1YMR200W MCA1Q08601 432 aa6.84□□□□□ -1.31
ROT1YMR200W ISW1P38144 1129 aa6.83□□□□□ -1.32
ROT1YMR200W BOL3P39724 118 aa6.83□□□□□ -1.32
ROT1YMR200W APC11Q12157 165 aa6.83□□□□□ -1.32
ROT1YMR200W YIL165CP40446 119 aa6.81□□□□□ -1.32
ROT1YMR200W HXT8P40886 569 aa6.81□□□□□ -1.32
ROT1YMR200W SUT1P53032 299 aaKnown RBP6.81□□□□□ -1.32
ROT1YMR200W SNU71P53207 620 aaKnown RBP6.81□□□□□ -1.32
ROT1YMR200W RRN6P32786 894 aa6.8□□□□□ -1.32
ROT1YMR200W PPT1P53043 513 aa6.8□□□□□ -1.32
ROT1YMR200W EMG1Q06287 252 aaKnown RBP6.8□□□□□ -1.32
ROT1YMR200W LSO1Q3E827 93 aa6.8□□□□□ -1.32
ROT1YMR200W RGD2P43556 714 aa6.79□□□□□ -1.32
ROT1YMR200W BUD9P53226 547 aa6.79□□□□□ -1.32
ROT1YMR200W GAS5Q08193 484 aa6.79□□□□□ -1.32
ROT1YMR200W SLD2P34252 453 aa6.78□□□□□ -1.32
ROT1YMR200W TAT1P38085 619 aa6.78□□□□□ -1.32
ROT1YMR200W AMN1P38285 549 aaPredicted RBP6.78□□□□□ -1.32
ROT1YMR200W YJL181WP46987 611 aa6.78□□□□□ -1.32
ROT1YMR200W TOP1P04786 769 aa6.77□□□□□ -1.33
ROT1YMR200W MET10P39692 1035 aa6.77□□□□□ -1.33
ROT1YMR200W FUR4P05316 633 aaKnown RBP6.76□□□□□ -1.33
ROT1YMR200W RRM3P38766 723 aa6.75□□□□□ -1.33
ROT1YMR200W FIR1P40020 876 aa6.75□□□□□ -1.33
ROT1YMR200W TED1P40533 473 aa6.75□□□□□ -1.33
ROT1YMR200W RSC2Q06488 889 aa6.75□□□□□ -1.33
ROT1YMR200W NTA1P40354 457 aa6.74□□□□□ -1.33
ROT1YMR200W LSB6P42951 607 aa6.74□□□□□ -1.33
ROT1YMR200W TIF6Q12522 245 aaKnown RBP6.74□□□□□ -1.33
ROT1YMR200W TFA2P36145 328 aa6.73□□□□□ -1.33
ROT1YMR200W AIM46P38885 310 aa6.73□□□□□ -1.33
ROT1YMR200W SOK2P53438 785 aaPredicted RBP6.73□□□□□ -1.33
ROT1YMR200W RPL34AP87262 121 aaPredicted RBP6.73□□□□□ -1.33
ROT1YMR200W AI3P03877 415 aa6.72□□□□□ -1.33
ROT1YMR200W RAD55P38953 406 aa6.72□□□□□ -1.33
ROT1YMR200W GIP2P40036 548 aa6.72□□□□□ -1.33
ROT1YMR200W INP51P40559 946 aaKnown RBP6.72□□□□□ -1.33
ROT1YMR200W ALD3P54114 506 aa6.72□□□□□ -1.33
ROT1YMR200W KAR5Q04746 504 aa6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 131.6 ms