RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C MSN5P52918 1224 aa10.76□□□□□ -0.69
SEC61YLR378C ERO1Q03103 563 aa10.76□□□□□ -0.69
SEC61YLR378C LSP1Q12230 341 aaKnown RBP10.76□□□□□ -0.69
SEC61YLR378C UBX2Q04228 584 aa10.75□□□□□ -0.69
SEC61YLR378C DUR1,2P32528 1835 aaKnown RBP10.75□□□□□ -0.69
SEC61YLR378C PMD1P32634 1753 aa10.75□□□□□ -0.69
SEC61YLR378C CAF20P12962 161 aaKnown RBP10.75□□□□□ -0.69
SEC61YLR378C RPT4P53549 437 aaKnown RBP10.75□□□□□ -0.69
SEC61YLR378C TRL1P09880 827 aaKnown RBP10.74□□□□□ -0.69
SEC61YLR378C KRE2P27809 442 aa10.74□□□□□ -0.69
SEC61YLR378C YKL222CP35995 705 aa10.74□□□□□ -0.69
SEC61YLR378C GLO3P38682 493 aaKnown RBP10.74□□□□□ -0.69
SEC61YLR378C CWH41P53008 833 aa10.74□□□□□ -0.69
SEC61YLR378C PSF3Q12146 194 aa10.74□□□□□ -0.69
SEC61YLR378C SPO22P40511 975 aa10.73□□□□□ -0.69
SEC61YLR378C SMY1P32364 656 aaKnown RBP10.72□□□□□ -0.69
SEC61YLR378C NPL4P33755 580 aa10.72□□□□□ -0.69
SEC61YLR378C ERT1P38140 529 aa10.72□□□□□ -0.69
SEC61YLR378C SPL2P38839 148 aa10.72□□□□□ -0.69
SEC61YLR378C YMR147WP40218 223 aaKnown RBP10.72□□□□□ -0.69
SEC61YLR378C INM2Q05533 292 aa10.72□□□□□ -0.69
SEC61YLR378C TAH18Q12181 623 aa10.72□□□□□ -0.69
SEC61YLR378C CYB2P00175 591 aa10.71□□□□□ -0.69
SEC61YLR378C GEF1P37020 779 aa10.71□□□□□ -0.69
SEC61YLR378C BBC1P47068 1157 aa10.71□□□□□ -0.69
SEC61YLR378C SSF2Q12153 453 aaPredicted RBP10.71□□□□□ -0.69
SEC61YLR378C GRX6Q12438 231 aa10.71□□□□□ -0.69
SEC61YLR378C CTT1P06115 562 aa10.7□□□□□ -0.7
SEC61YLR378C AIM9P40053 627 aaKnown RBP10.7□□□□□ -0.7
SEC61YLR378C YIR042CP40586 236 aa10.7□□□□□ -0.7
SEC61YLR378C IRC8P47046 822 aa10.7□□□□□ -0.7
SEC61YLR378C IRC4Q03036 179 aa10.7□□□□□ -0.7
SEC61YLR378C VPS20Q04272 221 aa10.7□□□□□ -0.7
SEC61YLR378C SIS2P36024 562 aa10.69□□□□□ -0.7
SEC61YLR378C MET1P36150 593 aa10.69□□□□□ -0.7
SEC61YLR378C DJP1P40564 432 aa10.69□□□□□ -0.7
SEC61YLR378C IOC3P43596 787 aa10.69□□□□□ -0.7
SEC61YLR378C LCB1P25045 558 aaKnown RBP10.68□□□□□ -0.7
SEC61YLR378C CIC1P38779 376 aaKnown RBP10.68□□□□□ -0.7
SEC61YLR378C RRP8P38961 392 aaKnown RBP10.68□□□□□ -0.7
SEC61YLR378C TIF4632P39936 914 aaKnown RBP10.68□□□□□ -0.7
SEC61YLR378C YFH7P43591 353 aa10.68□□□□□ -0.7
SEC61YLR378C JJJ2P46997 583 aa10.68□□□□□ -0.7
SEC61YLR378C ARP5P53946 755 aa10.68□□□□□ -0.7
SEC61YLR378C PKH3Q03306 898 aaPredicted RBP10.68□□□□□ -0.7
SEC61YLR378C KAR5Q04746 504 aa10.68□□□□□ -0.7
SEC61YLR378C LAM4P38800 1345 aa10.68□□□□□ -0.7
SEC61YLR378C SKI2P35207 1287 aaKnown RBP RIP-Chip data10.67□□□□□ -0.7not detected
SEC61YLR378C BOI1P38041 980 aaKnown RBP10.67□□□□□ -0.7
SEC61YLR378C GRX7P38068 203 aa10.67□□□□□ -0.7
SEC61YLR378C EAF6P47128 113 aa10.67□□□□□ -0.7
SEC61YLR378C ESF1Q06344 628 aaKnown RBP10.67□□□□□ -0.7
SEC61YLR378C BIK1P11709 440 aa10.67□□□□□ -0.7
SEC61YLR378C SNF7P39929 240 aaKnown RBP10.67□□□□□ -0.7
SEC61YLR378C NPA3P47122 385 aa10.67□□□□□ -0.7
SEC61YLR378C COG8Q04632 607 aa10.67□□□□□ -0.7
SEC61YLR378C FAS2P19097 1887 aaKnown RBP10.66□□□□□ -0.7
SEC61YLR378C FIG2P25653 1609 aa10.66□□□□□ -0.7
SEC61YLR378C RPL19AP0CX82 189 aaKnown RBP10.66□□□□□ -0.7
SEC61YLR378C RPL19BP0CX83 189 aaPredicted RBP10.66□□□□□ -0.7
SEC61YLR378C RET1P22276 1149 aaKnown RBP10.66□□□□□ -0.7
SEC61YLR378C PEP3P27801 918 aa10.66□□□□□ -0.7
SEC61YLR378C IMP2'P32351 346 aa10.66□□□□□ -0.7
SEC61YLR378C PTK1P36002 662 aaPredicted RBP10.66□□□□□ -0.7
SEC61YLR378C PGA3Q12746 312 aaKnown RBP10.66□□□□□ -0.7
SEC61YLR378C MSP1P28737 362 aa10.65□□□□□ -0.7
SEC61YLR378C YKU70P32807 602 aa10.65□□□□□ -0.7
SEC61YLR378C MDL2P33311 773 aa10.65□□□□□ -0.7
SEC61YLR378C SLN1P39928 1220 aaPredicted RBP10.65□□□□□ -0.7
SEC61YLR378C SPN1Q06505 410 aaPredicted RBP10.65□□□□□ -0.7
SEC61YLR378C PSK2Q08217 1101 aa10.65□□□□□ -0.7
SEC61YLR378C CLC1P17891 233 aa10.64□□□□□ -0.71
SEC61YLR378C ROX1P25042 368 aa10.64□□□□□ -0.71
SEC61YLR378C RPT3P33298 428 aaKnown RBP10.64□□□□□ -0.71
SEC61YLR378C TTI1P36097 1038 aa10.64□□□□□ -0.71
SEC61YLR378C CRG1P38892 291 aaRIP-Chip data10.64□□□□□ -0.71not detected
SEC61YLR378C BDH2P39713 417 aa10.64□□□□□ -0.71
SEC61YLR378C PPM2Q08282 695 aa10.64□□□□□ -0.71
SEC61YLR378C HKR1P41809 1802 aa10.63□□□□□ -0.71
SEC61YLR378C YER156CP40093 338 aaKnown RBP10.63□□□□□ -0.71
SEC61YLR378C VID28P40547 921 aa10.63□□□□□ -0.71
SEC61YLR378C YKE2P52553 114 aa10.63□□□□□ -0.71
SEC61YLR378C PIP2P52960 996 aa10.63□□□□□ -0.71
SEC61YLR378C YGL081WP53156 320 aa10.63□□□□□ -0.71
SEC61YLR378C WRS1Q12109 432 aaKnown RBP10.63□□□□□ -0.71
SEC61YLR378C PEX14P53112 341 aa10.62□□□□□ -0.71
SEC61YLR378C PRP42Q03776 544 aaKnown RBP10.62□□□□□ -0.71
SEC61YLR378C TSR3Q12094 313 aaKnown RBP10.62□□□□□ -0.71
SEC61YLR378C RPS9BP05755 195 aaKnown RBP10.61□□□□□ -0.71
SEC61YLR378C COQ1P18900 473 aa10.61□□□□□ -0.71
SEC61YLR378C ICL1P28240 557 aaPredicted RBP10.61□□□□□ -0.71
SEC61YLR378C YHL017WP38745 532 aa10.61□□□□□ -0.71
SEC61YLR378C GSM1P42950 618 aa10.61□□□□□ -0.71
SEC61YLR378C CTF18P49956 741 aa10.61□□□□□ -0.71
SEC61YLR378C HST1P53685 503 aa10.61□□□□□ -0.71
SEC61YLR378C HRQ1Q05549 1077 aa10.61□□□□□ -0.71
SEC61YLR378C FBP26P32604 452 aa10.6□□□□□ -0.71
SEC61YLR378C RER2P35196 286 aa10.6□□□□□ -0.71
SEC61YLR378C HAP5Q02516 242 aa10.6□□□□□ -0.71
SEC61YLR378C TOS4Q06266 489 aa10.6□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms