RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeastyeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCS4YLR272C XKS1P42826 600 aa2.12□□□□□ -2.07
YCS4YLR272C SAM37P50110 327 aa2.12□□□□□ -2.07
YCS4YLR272C ECM16Q04217 1267 aaKnown RBP2.12□□□□□ -2.07
YCS4YLR272C BCK2P33306 851 aa2.11□□□□□ -2.07
YCS4YLR272C NUP82P40368 713 aa2.11□□□□□ -2.07
YCS4YLR272C ALR2P43553 858 aa2.11□□□□□ -2.07
YCS4YLR272C NAF1P53919 492 aaKnown RBP2.11□□□□□ -2.07
YCS4YLR272C CWC15Q03772 175 aaKnown RBP2.11□□□□□ -2.07
YCS4YLR272C ABD1P32783 436 aaPredicted RBP2.11□□□□□ -2.07
YCS4YLR272C BOI1P38041 980 aaKnown RBP2.11□□□□□ -2.07
YCS4YLR272C CCC2P38995 1004 aa2.11□□□□□ -2.07
YCS4YLR272C NEO1P40527 1151 aa2.11□□□□□ -2.07
YCS4YLR272C ATG1P53104 897 aa2.11□□□□□ -2.07
YCS4YLR272C TIM23P32897 222 aa2.11□□□□□ -2.07
YCS4YLR272C FRA1Q07825 749 aa2.11□□□□□ -2.07
YCS4YLR272C PHO8P11491 566 aa2.1□□□□□ -2.07
YCS4YLR272C YBR197CP38306 217 aa2.1□□□□□ -2.07
YCS4YLR272C ESF1Q06344 628 aaKnown RBP2.1□□□□□ -2.07
YCS4YLR272C YDR306CQ06640 478 aa2.1□□□□□ -2.07
YCS4YLR272C PEP12P32854 288 aa2.1□□□□□ -2.07
YCS4YLR272C CRP1P38845 465 aaKnown RBP2.1□□□□□ -2.07
YCS4YLR272C MSH4P40965 878 aaPredicted RBP2.1□□□□□ -2.07
YCS4YLR272C HUL4P40985 892 aa2.1□□□□□ -2.07
YCS4YLR272C TRS120Q04183 1289 aa2.1□□□□□ -2.07
YCS4YLR272C YDL124WQ07551 312 aaKnown RBP2.1□□□□□ -2.07
YCS4YLR272C GRX1P25373 110 aaKnown RBP2.09□□□□□ -2.07
YCS4YLR272C NMD3P38861 518 aaKnown RBP2.09□□□□□ -2.07
YCS4YLR272C DAK2P43550 591 aa2.09□□□□□ -2.07
YCS4YLR272C YPR196WQ06595 470 aa2.09□□□□□ -2.07
YCS4YLR272C STB3Q12427 513 aa2.09□□□□□ -2.07
YCS4YLR272C GAL11P19659 1081 aa2.09□□□□□ -2.07
YCS4YLR272C AAR2P32357 355 aaPredicted RBP2.09□□□□□ -2.07
YCS4YLR272C TYW3P53177 273 aa2.09□□□□□ -2.07
YCS4YLR272C TY1A-DR4O74302 440 aa2.09□□□□□ -2.08
YCS4YLR272C TY1A-HP0C2I4 478 aaKnown RBP2.09□□□□□ -2.08
YCS4YLR272C TY1A-AP0CX57 440 aa2.09□□□□□ -2.08
YCS4YLR272C TY1A-PR1P0CX58 440 aa2.09□□□□□ -2.08
YCS4YLR272C TY1A-ORP0CX59 440 aa2.09□□□□□ -2.08
YCS4YLR272C TY1A-PR2P0CX60 440 aa2.09□□□□□ -2.08
YCS4YLR272C TY1A-DR5P0CX65 440 aa2.09□□□□□ -2.08
YCS4YLR272C TY1A-ER2P0CX66 440 aa2.09□□□□□ -2.08
YCS4YLR272C TY1A-GR3P0CX67 440 aa2.09□□□□□ -2.08
YCS4YLR272C TY1A-LR1P0CX68 440 aa2.09□□□□□ -2.08
YCS4YLR272C TY1A-MR2P0CX69 440 aa2.09□□□□□ -2.08
YCS4YLR272C MRF1P30775 413 aaPredicted RBP2.09□□□□□ -2.08
YCS4YLR272C PBP2P38151 413 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08not detected
YCS4YLR272C BSD2P38356 321 aa2.09□□□□□ -2.08
YCS4YLR272C AIM46P38885 310 aa2.09□□□□□ -2.08
YCS4YLR272C DOT6P40059 670 aaKnown RBP2.09□□□□□ -2.08
YCS4YLR272C PEA2P40091 420 aa2.09□□□□□ -2.08
YCS4YLR272C TY1A-JR2P47099 440 aa2.09□□□□□ -2.08
YCS4YLR272C YJR115WP47152 169 aa2.09□□□□□ -2.08
YCS4YLR272C NAN1Q02931 896 aaKnown RBP2.09□□□□□ -2.08
YCS4YLR272C TY1A-DR1Q03856 440 aa2.09□□□□□ -2.08
YCS4YLR272C TY1A-ML1Q04706 440 aaKnown RBP2.09□□□□□ -2.08
YCS4YLR272C TY1A-BRQ12217 440 aa2.09□□□□□ -2.08
YCS4YLR272C TY1A-NL2Q12470 440 aa2.09□□□□□ -2.08
YCS4YLR272C TY1A-GR2Q12485 440 aa2.09□□□□□ -2.08
YCS4YLR272C SEC2P17065 759 aa2.08□□□□□ -2.08
YCS4YLR272C SPC42P36094 363 aa2.08□□□□□ -2.08
YCS4YLR272C NIT1P40447 199 aa2.08□□□□□ -2.08
YCS4YLR272C EAF1Q06337 982 aa2.08□□□□□ -2.08
YCS4YLR272C MLF3P32047 452 aa2.08□□□□□ -2.08
YCS4YLR272C UGA4P32837 571 aa2.08□□□□□ -2.08
YCS4YLR272C SMC1P32908 1225 aa2.08□□□□□ -2.08
YCS4YLR272C YBR287WP38355 427 aa2.08□□□□□ -2.08
YCS4YLR272C RSC30P38781 883 aa2.08□□□□□ -2.08
YCS4YLR272C FAA3P39002 694 aa2.08□□□□□ -2.08
YCS4YLR272C BFA1P47113 574 aa2.08□□□□□ -2.08
YCS4YLR272C SPO75Q07798 868 aa2.08□□□□□ -2.08
YCS4YLR272C ASH1P34233 588 aa2.08□□□□□ -2.08
YCS4YLR272C GEM1P39722 662 aa2.08□□□□□ -2.08
YCS4YLR272C SAH1P39954 449 aaKnown RBP2.08□□□□□ -2.08
YCS4YLR272C HXT8P40886 569 aa2.08□□□□□ -2.08
YCS4YLR272C KAR2P16474 682 aaKnown RBP2.07□□□□□ -2.08
YCS4YLR272C AVO1Q08236 1176 aa2.07□□□□□ -2.08
YCS4YLR272C FAP7Q12055 197 aaPredicted RBP2.07□□□□□ -2.08
YCS4YLR272C PHR1P05066 565 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
YCS4YLR272C ARG82P07250 355 aa2.07□□□□□ -2.08
YCS4YLR272C HVG1P0CE11 249 aa2.07□□□□□ -2.08
YCS4YLR272C SEC61P32915 480 aa2.07□□□□□ -2.08
YCS4YLR272C ALG12P53730 551 aa2.07□□□□□ -2.08
YCS4YLR272C UFD2P54860 961 aa2.07□□□□□ -2.08
YCS4YLR272C BSC2Q05611 235 aa2.07□□□□□ -2.08
YCS4YLR272C FPR4Q06205 392 aaPredicted RBP2.07□□□□□ -2.08
YCS4YLR272C SPP382Q06411 708 aaPredicted RBP2.07□□□□□ -2.08
YCS4YLR272C YPR071WQ12346 211 aa2.07□□□□□ -2.08
YCS4YLR272C ERR1P0CX10 437 aa2.07□□□□□ -2.08
YCS4YLR272C ERR2P0CX11 437 aa2.07□□□□□ -2.08
YCS4YLR272C CHL1P22516 861 aaPredicted RBP2.07□□□□□ -2.08
YCS4YLR272C MET4P32389 672 aa2.07□□□□□ -2.08
YCS4YLR272C YRO2P38079 344 aa2.07□□□□□ -2.08
YCS4YLR272C RRD1P40454 393 aaKnown RBP2.07□□□□□ -2.08
YCS4YLR272C PPT1P53043 513 aa2.07□□□□□ -2.08
YCS4YLR272C RAD18P10862 487 aa2.06□□□□□ -2.08
YCS4YLR272C PRP40P33203 583 aaKnown RBP2.06□□□□□ -2.08
YCS4YLR272C VPS35P34110 944 aa2.06□□□□□ -2.08
YCS4YLR272C SUM1P46676 1062 aa2.06□□□□□ -2.08
YCS4YLR272C CLA4P48562 842 aa2.06□□□□□ -2.08
YCS4YLR272C YAF9P53930 226 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms