RNA–Protein interactions for RNA: YKL062W

MSN4, Transcript of Stress-responsive transcriptional activator, yeastyeast

Gene MSN4, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN4YKL062W KRE33P53914 1056 aaKnown RBP5.85□□□□□ -1.47
MSN4YKL062W GLO3P38682 493 aaKnown RBP5.85□□□□□ -1.47
MSN4YKL062W QDR1P40475 563 aa5.85□□□□□ -1.47
MSN4YKL062W APC11Q12157 165 aa5.85□□□□□ -1.47
MSN4YKL062W TRL1P09880 827 aaKnown RBP5.84□□□□□ -1.47
MSN4YKL062W RPC31P17890 251 aa5.84□□□□□ -1.47
MSN4YKL062W SKP1P52286 194 aa5.84□□□□□ -1.47
MSN4YKL062W ATG1P53104 897 aa5.84□□□□□ -1.47
MSN4YKL062W ADE12P80210 433 aaKnown RBP5.84□□□□□ -1.47
MSN4YKL062W YBL113CQ7M4S9 792 aa5.84□□□□□ -1.47
MSN4YKL062W RPP1AP05318 106 aaPredicted RBP5.83□□□□□ -1.48
MSN4YKL062W ERP5P38819 212 aa5.83□□□□□ -1.48
MSN4YKL062W CEM1P39525 442 aa5.83□□□□□ -1.48
MSN4YKL062W SUT1P53032 299 aaKnown RBP5.83□□□□□ -1.48
MSN4YKL062W CUS1Q02554 436 aaPredicted RBP5.83□□□□□ -1.48
MSN4YKL062W FPS1P23900 669 aa5.83□□□□□ -1.48
MSN4YKL062W HXT8P40886 569 aa5.83□□□□□ -1.48
MSN4YKL062W YPL062WQ02781 134 aa5.83□□□□□ -1.48
MSN4YKL062W NOP8Q08287 484 aaPredicted RBP5.83□□□□□ -1.48
MSN4YKL062W ACF4P47129 309 aa5.82□□□□□ -1.48
MSN4YKL062W HPF1Q05164 967 aa5.82□□□□□ -1.48
MSN4YKL062W SYT1Q06836 1226 aa5.82□□□□□ -1.48
MSN4YKL062W YDR461C-AQ2V2P7 80 aa5.82□□□□□ -1.48
MSN4YKL062W GRS1P38088 690 aaKnown RBP5.81□□□□□ -1.48
MSN4YKL062W APM2P38700 605 aa5.81□□□□□ -1.48
MSN4YKL062W SSF1P38789 453 aaPredicted RBP5.81□□□□□ -1.48
MSN4YKL062W LYS5P50113 272 aa5.81□□□□□ -1.48
MSN4YKL062W RPB10P22139 70 aa5.81□□□□□ -1.48
MSN4YKL062W MSN1P22148 382 aa5.81□□□□□ -1.48
MSN4YKL062W KTR2P33550 425 aa5.81□□□□□ -1.48
MSN4YKL062W GIP1P38229 639 aa5.81□□□□□ -1.48
MSN4YKL062W FIR1P40020 876 aa5.81□□□□□ -1.48
MSN4YKL062W MDJ2P42834 146 aa5.81□□□□□ -1.48
MSN4YKL062W YOR296WQ08748 1289 aa5.81□□□□□ -1.48
MSN4YKL062W NAB2P32505 525 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
MSN4YKL062W ISW1P38144 1129 aa5.8□□□□□ -1.48
MSN4YKL062W NCL1P38205 684 aaKnown RBP5.8□□□□□ -1.48
MSN4YKL062W BSD2P38356 321 aa5.79□□□□□ -1.48
MSN4YKL062W YGR035CP53222 116 aa5.79□□□□□ -1.48
MSN4YKL062W YBR287WP38355 427 aa5.79□□□□□ -1.48
MSN4YKL062W YNR040WP53736 256 aa5.79□□□□□ -1.48
MSN4YKL062W SMC1P32908 1225 aa5.78□□□□□ -1.48
MSN4YKL062W HEH2Q03281 663 aa5.78□□□□□ -1.48
MSN4YKL062W DPH6Q12429 685 aa5.78□□□□□ -1.48
MSN4YKL062W MSC7P38694 644 aa5.77□□□□□ -1.49
MSN4YKL062W ITC1P53125 1264 aa5.77□□□□□ -1.49
MSN4YKL062W RGD2P43556 714 aa5.77□□□□□ -1.49
MSN4YKL062W JJJ3P47138 172 aa5.77□□□□□ -1.49
MSN4YKL062W RAD55P38953 406 aa5.76□□□□□ -1.49
MSN4YKL062W STM1P39015 273 aaKnown RBP5.76□□□□□ -1.49
MSN4YKL062W NTA1P40354 457 aa5.76□□□□□ -1.49
MSN4YKL062W UFD2P54860 961 aa5.76□□□□□ -1.49
MSN4YKL062W TY1A-DR2Q03964 440 aaKnown RBP5.76□□□□□ -1.49
MSN4YKL062W TRS120Q04183 1289 aa5.75□□□□□ -1.49
MSN4YKL062W SLD2P34252 453 aa5.75□□□□□ -1.49
MSN4YKL062W YHL050CP38721 697 aa5.75□□□□□ -1.49
MSN4YKL062W YHR219WP38900 624 aa5.75□□□□□ -1.49
MSN4YKL062W TRK2P28584 889 aa5.74□□□□□ -1.49
MSN4YKL062W YIL165CP40446 119 aa5.74□□□□□ -1.49
MSN4YKL062W NUT2Q06213 157 aa5.74□□□□□ -1.49
MSN4YKL062W EMG1Q06287 252 aaKnown RBP5.74□□□□□ -1.49
MSN4YKL062W IRS4P36115 615 aaKnown RBP5.73□□□□□ -1.49
MSN4YKL062W AIM46P38885 310 aa5.73□□□□□ -1.49
MSN4YKL062W TIF6Q12522 245 aaKnown RBP5.73□□□□□ -1.49
MSN4YKL062W FRT1Q99332 602 aa5.73□□□□□ -1.49
MSN4YKL062W PSY2P40164 858 aa5.73□□□□□ -1.49
MSN4YKL062W TOP1P04786 769 aa5.72□□□□□ -1.49
MSN4YKL062W YER156CP40093 338 aaKnown RBP5.72□□□□□ -1.49
MSN4YKL062W MSC6Q08818 692 aaKnown RBP5.72□□□□□ -1.49
MSN4YKL062W MNL2Q12205 849 aa5.72□□□□□ -1.49
MSN4YKL062W GPM1P00950 247 aaKnown RBP5.71□□□□□ -1.5
MSN4YKL062W IDI1P15496 288 aa5.71□□□□□ -1.5
MSN4YKL062W PRK1P40494 810 aa5.71□□□□□ -1.5
MSN4YKL062W YNL011CP53980 444 aa5.71□□□□□ -1.5
MSN4YKL062W SEN54Q02825 467 aaPredicted RBP5.71□□□□□ -1.5
MSN4YKL062W RSC4Q02206 625 aa5.71□□□□□ -1.5
MSN4YKL062W PDC5P16467 563 aaKnown RBP5.7□□□□□ -1.5
MSN4YKL062W SEC20P28791 383 aa5.69□□□□□ -1.5
MSN4YKL062W KNS1P32350 737 aaPredicted RBP5.69□□□□□ -1.5
MSN4YKL062W IPL1P38991 367 aa5.69□□□□□ -1.5
MSN4YKL062W YRB30P53107 440 aaPredicted RBP5.69□□□□□ -1.5
MSN4YKL062W SNU71P53207 620 aaKnown RBP5.69□□□□□ -1.5
MSN4YKL062W RSC2Q06488 889 aa5.69□□□□□ -1.5
MSN4YKL062W PPX1P38698 397 aa5.68□□□□□ -1.5
MSN4YKL062W CDC55Q00362 526 aa5.68□□□□□ -1.5
MSN4YKL062W GPI13Q07830 1017 aa5.68□□□□□ -1.5
MSN4YKL062W PPT1P53043 513 aa5.68□□□□□ -1.5
MSN4YKL062W MRP10O75012 95 aa5.66□□□□□ -1.5
MSN4YKL062W THI12P42883 340 aa5.66□□□□□ -1.5
MSN4YKL062W THI5P43534 340 aa5.66□□□□□ -1.5
MSN4YKL062W YJL181WP46987 611 aa5.66□□□□□ -1.5
MSN4YKL062W THI11P47183 340 aa5.66□□□□□ -1.5
MSN4YKL062W NOP7P53261 605 aaKnown RBP5.66□□□□□ -1.5
MSN4YKL062W BSC2Q05611 235 aa5.66□□□□□ -1.5
MSN4YKL062W THI13Q07748 340 aa5.66□□□□□ -1.5
MSN4YKL062W AI1P03875 834 aa5.65□□□□□ -1.5
MSN4YKL062W WHI5Q12416 295 aa5.65□□□□□ -1.5
MSN4YKL062W INP51P40559 946 aaKnown RBP5.64□□□□□ -1.51
MSN4YKL062W PYC2P32327 1180 aaKnown RBP5.64□□□□□ -1.51
MSN4YKL062W SAM37P50110 327 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms